K00230


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Kegg Orthologs K00230, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Kegg Orthologs within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Kegg Ortholog(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Orthologs has been clustered.
In red the Kegg Orthologs with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Kegg Orthologs prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Orthologs.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Orthologs prediction.

Description

External link K00230
KO K00230
Description menaquinone-dependent protoporphyrinogen oxidase [EC:1.3.5.3]

KO part of 4 pathways

Porphyrin metabolism
Metabolic pathways
Biosynthesis of secondary metabolites
Biosynthesis of cofactors

KO part of 1 modules

M00121 Cofactor and vitamin metabolism Heme biosynthesis, plants and bacteria, glutamate => heme

Occurence in the database

K00230 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2202 PMI_RS17660 3875905 3876435 1 hemG menaquinone-dependent protoporphyrinogen IX dehydrogenase Proteus mirabilis HI4320
1 group_2202 FBDBKF_16865 180 704 -1 hemG menaquinone-dependent protoporphyrinogen IX dehydrogenase Morganella morganii S1
2 group_2202 EHELCC_19565 10754 11278 1 hemG menaquinone-dependent protoporphyrinogen IX dehydrogenase Morganella morganii S2
3 group_2202 NLDBIP_16935 67806 68330 1 hemG menaquinone-dependent protoporphyrinogen IX dehydrogenase Morganella morganii S4
4 group_2202 LHKJJB_16535 180 704 -1 hemG menaquinone-dependent protoporphyrinogen IX dehydrogenase Morganella morganii S3
5 group_2202 HKOGLL_17500 180 704 -1 hemG menaquinone-dependent protoporphyrinogen IX dehydrogenase Morganella morganii S5
6 group_2202 F4V73_RS18335 298 822 -1 hemG menaquinone-dependent protoporphyrinogen IX dehydrogenase Morganella psychrotolerans