Homologs in group_2202

Help

6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_16865 FBDBKF_16865 100.0 Morganella morganii S1 hemG menaquinone-dependent protoporphyrinogen IX dehydrogenase
EHELCC_19565 EHELCC_19565 100.0 Morganella morganii S2 hemG menaquinone-dependent protoporphyrinogen IX dehydrogenase
LHKJJB_16535 LHKJJB_16535 100.0 Morganella morganii S3 hemG menaquinone-dependent protoporphyrinogen IX dehydrogenase
HKOGLL_17500 HKOGLL_17500 100.0 Morganella morganii S5 hemG menaquinone-dependent protoporphyrinogen IX dehydrogenase
F4V73_RS18335 F4V73_RS18335 83.9 Morganella psychrotolerans hemG menaquinone-dependent protoporphyrinogen IX dehydrogenase
PMI_RS17660 PMI_RS17660 67.8 Proteus mirabilis HI4320 hemG menaquinone-dependent protoporphyrinogen IX dehydrogenase

Distribution of the homologs in the orthogroup group_2202

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_2202

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q9L6L1 3.5e-66 203 52 0 174 3 hemG Protoporphyrinogen IX dehydrogenase [quinone] Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0ACB4 7.68e-66 202 52 0 174 1 hemG Protoporphyrinogen IX dehydrogenase [quinone] Escherichia coli (strain K12)
P0ACB5 7.68e-66 202 52 0 174 3 hemG Protoporphyrinogen IX dehydrogenase [quinone] Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0ACB6 7.68e-66 202 52 0 174 3 hemG Protoporphyrinogen IX dehydrogenase [quinone] Escherichia coli O157:H7
Q4QIU7 5.96e-59 186 53 1 172 1 hemG Protoporphyrinogen IX dehydrogenase [quinone] Leishmania major

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_16935
Feature type CDS
Gene hemG
Product menaquinone-dependent protoporphyrinogen IX dehydrogenase
Location 67806 - 68330 (strand: 1)
Length 525 (nucleotides) / 174 (amino acids)

Contig

Accession ZDB_534
Length 68509 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2202
Orthogroup size 7
N. genomes 7

Actions

Genomic region

Domains

PF12724 Flavodoxin domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG4635 Coenzyme transport and metabolism (H) H Protoporphyrinogen IX oxidase, menaquinone-dependent (flavodoxin domain)

Kegg Ortholog Annotation(s)

Protein Sequence

MSYLLLYSGHDGQTKKIITEIALHLRKAGAECDVRSLQDNQPLNLAPYEKVLVGASIRYGHFNRALNKFAKLHAVQLNQMKTAFFGVNLTARKPEKRTPETNVYVRKFLAATPWKPTACTVFAGALLYPRYGWFDRMMIRLIMKMTKGETDTTKEVEYTDWQQVEAFAAEFVQI

Flanking regions ( +/- flanking 50bp)

TTGCTGGTATTACTGACGCCGACTTTCTGGCGTGATTAATGGAGTGTTTCATGTCGTACTTGTTGCTTTATTCCGGCCATGACGGGCAGACAAAAAAAATCATTACTGAAATTGCCCTGCATTTGCGCAAAGCAGGGGCGGAGTGTGACGTCCGCTCTCTGCAGGATAATCAGCCGCTGAATCTGGCGCCGTATGAGAAAGTGCTGGTCGGGGCATCTATCCGCTACGGTCACTTTAACCGGGCGCTGAATAAATTCGCGAAGTTGCATGCGGTGCAGCTGAATCAGATGAAAACCGCATTCTTTGGTGTGAACCTGACTGCCCGTAAACCGGAAAAACGGACACCGGAGACAAATGTGTATGTCCGGAAATTCCTGGCCGCGACCCCCTGGAAGCCGACCGCCTGTACTGTATTCGCCGGGGCATTGCTGTATCCGCGTTACGGTTGGTTTGACCGGATGATGATCCGCCTGATTATGAAAATGACAAAAGGTGAAACGGATACCACCAAAGAAGTGGAATACACGGATTGGCAGCAGGTTGAAGCATTTGCTGCAGAGTTTGTTCAGATTTAAAGCAAATCACCGGCATTTTGCCGGATAAAACACCGTTGTGGTGAAAAAAG