Homologs in group_400

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7 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_16055 FBDBKF_16055 91.7 Morganella morganii S1 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA
EHELCC_18660 EHELCC_18660 91.7 Morganella morganii S2 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA
NLDBIP_17490 NLDBIP_17490 91.7 Morganella morganii S4 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA
LHKJJB_17170 LHKJJB_17170 91.7 Morganella morganii S3 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA
HKOGLL_17225 HKOGLL_17225 91.7 Morganella morganii S5 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA
PMI_RS00230 PMI_RS00230 30.6 Proteus mirabilis HI4320 - bifunctional metallophosphatase/5'-nucleotidase
PMI_RS10730 PMI_RS10730 81.6 Proteus mirabilis HI4320 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA

Distribution of the homologs in the orthogroup group_400

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_400

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q56878 0.0 886 78 2 553 3 ushA Protein UshA Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)
P07024 0.0 827 72 2 543 1 ushA Protein UshA Escherichia coli (strain K12)
P06196 0.0 814 73 2 530 3 ushA Silent protein UshA(0) Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q9RN37 0.0 791 73 2 530 3 ushA Protein UshA Salmonella pullorum
Q9KQ30 0.0 711 62 5 550 3 nutA 5'-nucleotidase Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
Q8DFG4 0.0 696 61 5 555 3 nutA 5'-nucleotidase Vibrio vulnificus (strain CMCP6)
P22848 0.0 694 60 5 555 3 nutA 5'-nucleotidase Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
A9BJC1 2.44e-81 266 34 14 507 1 mggB Mannosylglucosyl-3-phosphoglycerate phosphatase Petrotoga mobilis (strain DSM 10674 / SJ95)
O34313 1.72e-54 202 30 17 550 1 yfkN Trifunctional nucleotide phosphoesterase protein YfkN Bacillus subtilis (strain 168)
O34313 9.12e-18 91 22 22 580 1 yfkN Trifunctional nucleotide phosphoesterase protein YfkN Bacillus subtilis (strain 168)
P52307 9.9e-35 141 25 17 564 1 None Protein 5NUC (Fragment) Rhipicephalus microplus
Q9XZ43 5.46e-34 139 27 16 566 1 5NUC Protein 5NUC Lutzomyia longipalpis
B3A0N5 2.72e-32 134 25 18 556 1 APY Apyrase Tabanus yao
B6EWW8 3.76e-32 134 27 14 548 2 None Snake venom 5'-nucleotidase Gloydius brevicauda
F8S0Z7 1.51e-31 132 27 14 548 1 None Snake venom 5'-nucleotidase Crotalus adamanteus
A0A2I4HXH5 2.64e-30 128 26 16 545 1 None Snake venom 5'-nucleotidase (Fragment) Naja atra
Q05927 1.32e-28 123 25 16 592 1 NT5E 5'-nucleotidase Bos taurus
P21589 7.97e-28 121 25 16 580 1 NT5E 5'-nucleotidase Homo sapiens
P54602 8.66e-28 122 25 14 498 1 yhcR Endonuclease YhcR Bacillus subtilis (strain 168)
O83142 1.58e-27 120 26 26 595 3 TP_0104 Probable 5'-nucleotidase Treponema pallidum (strain Nichols)
E0D877 7.11e-27 118 23 16 571 1 APY Apyrase Aedes albopictus
Q61503 1.42e-25 114 25 15 547 1 Nt5e 5'-nucleotidase Mus musculus
P29240 2.01e-24 110 24 15 564 2 None 5'-nucleotidase Diplobatis ommata
P53052 5.35e-23 106 23 21 588 3 cpdB 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase Yersinia enterocolitica
P26265 1.18e-22 105 25 23 623 3 cpdB 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P21588 1.9e-22 104 24 16 567 1 Nt5e 5'-nucleotidase Rattus norvegicus
P50635 4.75e-22 103 24 22 578 1 APY Apyrase Aedes aegypti
P08331 4.49e-21 100 23 23 591 1 cpdB 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase Escherichia coli (strain K12)
P44764 4.81e-19 94 23 21 610 3 cpdB 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P44569 1.98e-11 70 28 9 268 1 HI_0206 NAD 5'-nucleotidase Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
W8EFS0 5.69e-10 65 23 11 405 1 None Snake venom 5'-nucleotidase (Fragment) Macrovipera lebetina
Q8YAJ5 6.54e-09 62 21 21 533 1 lmo0130 Cell wall protein Lmo0130 Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS16215
Feature type CDS
Gene ushA
Product bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA
Location 52141 - 53808 (strand: -1)
Length 1668 (nucleotides) / 555 (amino acids)

Contig

Accession term accessions NZ_VXKB01000006 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 212134 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_400
Orthogroup size 8
N. genomes 7

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Genomic region

Domains

PF00149 Calcineurin-like phosphoesterase
PF02872 5'-nucleotidase, C-terminal domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0737 Nucleotide transport and metabolism (F)
Defense mechanisms (V)		 FV 2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'- or 3'-nucleotidase, 5'-nucleotidase family

Kegg Ortholog Annotation(s)

Protein Sequence

MTFAFKTTISALAVSVALFPALAGAWEKDKTYDITILHTNDHHGHFWQNDHGEYGLSAQKTLVDGIRKEVEEKGGSVLLLSGGDINTGVPESDLQNAEPDFKGMNLVGYDAMALGNHEFDNPLATLRTQEKWANFPFLSANIYQKSTGERLFKPYALFDKQSIKIAVIGLTTDDTAKIGNPGNFPDTEFRIPAEEARKVVESLRETEKPDIIIAATHMGHYDDANHGSNAPGDVEMARSLPAGYLDMIVGGHSQDPVCMQPENKNYKIADYVPGTPCAPDKQNGTWIVQAHEWGKYVGRADFQFRNGEFTLKHYQLIPVNLKKKVTKDDGTSERIYYTSEITESPEMLKLLTPYQEKGDEQLSVKVGSVDAKLEGDRSKVRFEQTNMAHLMLAAQKERAGADFAIMSGGGVRDSIDAGEITYKNVLKVQPFANELVYVDFKGSEVLPYLQAVANMKPDSGAYAQFYNVGLTLNKDETISDVTIDGKPVYPEKTYRMATLNFNAIGGDGYPKIDTHPGYVSTGFVDAEVLKGYIEAHSPLKAADYEPKGEIVYKNK

Flanking regions ( +/- flanking 50bp)

TGCCTCCCGGCTATTTGCCGTTATCATCATTCAGAACATGGGGAACGACCATGACATTTGCATTTAAAACCACCATCAGTGCTCTGGCGGTTTCTGTGGCACTTTTTCCGGCACTTGCCGGTGCGTGGGAAAAAGATAAAACCTATGATATTACGATTTTGCATACAAATGACCATCACGGGCACTTTTGGCAGAATGACCACGGTGAATACGGACTTTCCGCTCAGAAAACGCTGGTGGACGGCATCCGTAAAGAAGTGGAAGAGAAGGGCGGCTCTGTTCTGCTGCTCTCCGGCGGGGATATTAATACCGGCGTACCGGAATCTGATCTGCAAAATGCCGAGCCGGATTTTAAAGGTATGAATCTGGTGGGTTATGATGCGATGGCGCTGGGTAACCATGAATTCGATAATCCGCTGGCAACCCTGCGGACTCAGGAAAAATGGGCAAACTTTCCGTTCCTCTCTGCCAATATTTATCAGAAAAGTACCGGCGAACGTTTATTTAAGCCGTATGCGCTGTTTGATAAACAAAGTATAAAAATAGCCGTTATCGGCTTAACAACGGATGATACCGCCAAAATCGGTAATCCGGGCAATTTCCCTGATACTGAATTCCGTATTCCGGCAGAAGAAGCCAGAAAAGTGGTTGAGAGCCTGCGCGAAACAGAAAAGCCTGACATTATCATCGCCGCCACTCATATGGGACATTATGATGATGCCAATCATGGCTCCAATGCCCCGGGGGATGTGGAAATGGCACGCAGCCTGCCAGCCGGGTATCTGGATATGATTGTCGGCGGGCACTCTCAGGACCCGGTCTGTATGCAGCCGGAAAATAAAAACTATAAAATTGCGGATTATGTACCCGGTACGCCATGTGCGCCGGATAAGCAGAACGGCACCTGGATTGTACAGGCTCATGAGTGGGGGAAATATGTCGGTCGTGCGGATTTTCAGTTCCGCAACGGGGAATTCACACTCAAACACTATCAGCTCATTCCTGTGAATCTTAAAAAGAAAGTCACGAAAGACGATGGCACATCAGAACGCATTTATTACACCAGTGAAATTACTGAAAGCCCGGAAATGCTGAAACTGCTGACGCCGTATCAGGAAAAAGGCGACGAACAGCTTAGTGTTAAAGTCGGGTCGGTGGACGCTAAACTGGAAGGCGATCGCAGTAAAGTGCGTTTTGAGCAGACTAATATGGCGCACCTGATGCTGGCCGCGCAGAAAGAGCGTGCTGGTGCCGATTTTGCCATTATGAGCGGCGGCGGTGTGCGTGATTCTATTGATGCGGGTGAGATCACGTACAAAAATGTATTGAAAGTTCAGCCGTTTGCGAATGAACTGGTGTATGTCGATTTTAAAGGATCAGAAGTACTGCCGTATTTACAGGCGGTTGCAAATATGAAACCGGACTCTGGTGCGTATGCGCAGTTTTATAATGTCGGGCTGACACTGAATAAAGACGAAACAATCAGTGATGTGACTATCGATGGTAAACCGGTCTACCCGGAGAAAACCTATCGTATGGCGACGCTGAACTTTAATGCTATCGGCGGGGATGGTTATCCGAAAATTGATACACATCCGGGATATGTCAGTACGGGTTTTGTCGATGCAGAAGTGCTGAAAGGTTATATTGAAGCTCATTCACCGCTGAAAGCGGCAGATTATGAGCCAAAGGGCGAAATCGTTTATAAAAACAAATAGCTGATTTCAGATACAATACAATACCGGAGATATTCCCGGTATTGTATTTA