Homologs in group_1053

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_05965 FBDBKF_05965 97.6 Morganella morganii S1 - Chaperone protein Skp
EHELCC_09010 EHELCC_09010 97.6 Morganella morganii S2 - Chaperone protein Skp
NLDBIP_09390 NLDBIP_09390 97.6 Morganella morganii S4 - Chaperone protein Skp
LHKJJB_08365 LHKJJB_08365 97.6 Morganella morganii S3 - Chaperone protein Skp
HKOGLL_07915 HKOGLL_07915 97.6 Morganella morganii S5 - Chaperone protein Skp
PMI_RS11240 PMI_RS11240 60.6 Proteus mirabilis HI4320 - OmpH family outer membrane protein

Distribution of the homologs in the orthogroup group_1053

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1053

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q9S340 7.12e-74 221 65 1 166 3 skp Chaperone protein Skp Photorhabdus luminescens
Q7N8N8 7.75e-73 219 65 1 166 3 skp Chaperone protein Skp Photorhabdus laumondii subsp. laumondii (strain DSM 15139 / CIP 105565 / TT01)
P31520 1.53e-62 192 64 0 145 3 skp Chaperone protein Skp Yersinia pseudotuberculosis serotype I (strain IP32953)
P58607 1.53e-62 192 64 0 145 3 skp Chaperone protein Skp Yersinia pestis
P31519 1.44e-57 180 61 0 143 2 skp Chaperone protein Skp Yersinia enterocolitica
Q6D8D4 1.47e-57 180 59 1 166 3 skp Chaperone protein Skp Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672)
P0A1Z2 1.34e-40 137 47 4 168 1 skp Chaperone protein Skp Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A1Z3 1.34e-40 137 47 4 168 3 skp Chaperone protein Skp Salmonella typhi
Q5PD64 1.34e-40 137 47 4 168 3 skp Chaperone protein Skp Salmonella paratyphi A (strain ATCC 9150 / SARB42)
Q57T30 1.34e-40 137 47 4 168 3 skp Chaperone protein Skp Salmonella choleraesuis (strain SC-B67)
Q493C3 1.45e-40 137 44 2 158 3 skp Chaperone protein Skp Blochmanniella pennsylvanica (strain BPEN)
Q3Z5I0 7.75e-39 132 51 3 149 3 skp Chaperone protein Skp Shigella sonnei (strain Ss046)
P0AEV0 7.75e-39 132 51 3 149 3 skp Chaperone protein Skp Shigella flexneri
Q32JT1 7.75e-39 132 51 3 149 3 skp Chaperone protein Skp Shigella dysenteriae serotype 1 (strain Sd197)
Q325W2 7.75e-39 132 51 3 149 3 skp Chaperone protein Skp Shigella boydii serotype 4 (strain Sb227)
P0AEU7 7.75e-39 132 51 3 149 1 skp Chaperone protein Skp Escherichia coli (strain K12)
P0AEU8 7.75e-39 132 51 3 149 3 skp Chaperone protein Skp Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0AEU9 7.75e-39 132 51 3 149 3 skp Chaperone protein Skp Escherichia coli O157:H7
Q7VRD7 1.15e-35 124 41 2 159 3 skp Chaperone protein Skp Blochmanniella floridana
Q9KPW1 8.97e-32 115 36 3 172 3 skp Chaperone protein Skp Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
Q57483 1.51e-24 97 33 4 195 1 omp26 Outer membrane protein 26 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q51922 3.88e-14 69 27 4 187 1 skp Outer membrane p25 Pasteurella multocida (strain Pm70)
Q9HXY5 2.25e-07 51 28 1 162 3 PA3647 Skp-like protein Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS15930
Feature type CDS
Gene -
Product OmpH family outer membrane protein
Location 194880 - 195380 (strand: 1)
Length 501 (nucleotides) / 166 (amino acids)

Contig

Accession term accessions NZ_VXKB01000005 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 213534 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1053
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF03938 Outer membrane protein (OmpH-like)

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2825 Cell wall/membrane/envelope biogenesis (M)
Posttranslational modification, protein turnover, chaperones (O)		 MO Periplasmic chaperone for outer membrane proteins, Skp family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K06142 outer membrane protein - -

Protein Sequence

MKKLLTAASVGMVLAMSAGAAQAADKIAVVNIGEVVQKMPGREAAAKQLESEFKSRGTDLQSLEKDLQTRAQKLQKDGATMKDSERQKLAGEFDTKRADFAKKAQTFDQDFQKRQMEERGKVMKRVEDAVKSVAAKGGYDVVIDANAVAYSVSGIDITADVLKQVK

Flanking regions ( +/- flanking 50bp)

TACCATTGGGTTTAATATCCAACCAATGAATGGGTTTAAGGGGTTTTATTGTGAAAAAGTTATTAACTGCTGCCAGCGTGGGAATGGTGTTAGCGATGTCTGCCGGTGCTGCTCAGGCTGCTGATAAAATCGCGGTTGTGAATATCGGTGAAGTTGTTCAGAAGATGCCGGGCCGTGAAGCGGCAGCTAAACAGCTGGAAAGTGAATTCAAAAGCCGTGGTACTGATCTGCAGAGCTTAGAAAAAGATCTGCAAACCCGTGCTCAGAAACTGCAGAAAGACGGCGCCACTATGAAAGACAGTGAGCGTCAGAAACTGGCTGGTGAGTTCGACACCAAACGTGCTGATTTCGCTAAAAAAGCCCAGACATTTGACCAGGATTTCCAGAAGCGTCAGATGGAAGAGCGCGGCAAAGTCATGAAACGTGTTGAAGATGCAGTGAAATCTGTTGCAGCCAAAGGCGGATATGACGTTGTTATCGATGCAAATGCAGTAGCGTATTCTGTATCCGGTATTGATATCACTGCTGATGTTCTGAAACAGGTTAAATAATTAATGTCTTCCATTCGATTAGCTGACCTCGCTCAGCAGTTGAATGCAAC