Homologs in group_1115

Help

6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_06360 FBDBKF_06360 94.2 Morganella morganii S1 ubiK Ubiquinone biosynthesis accessory factor UbiK
EHELCC_09405 EHELCC_09405 94.2 Morganella morganii S2 ubiK Ubiquinone biosynthesis accessory factor UbiK
NLDBIP_09785 NLDBIP_09785 94.2 Morganella morganii S4 ubiK Ubiquinone biosynthesis accessory factor UbiK
LHKJJB_07970 LHKJJB_07970 94.2 Morganella morganii S3 ubiK Ubiquinone biosynthesis accessory factor UbiK
HKOGLL_07520 HKOGLL_07520 94.2 Morganella morganii S5 ubiK Ubiquinone biosynthesis accessory factor UbiK
PMI_RS11645 PMI_RS11645 66.3 Proteus mirabilis HI4320 - accessory factor UbiK family protein

Distribution of the homologs in the orthogroup group_1115

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_1115

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q8ZLY9 3.41e-34 116 70 0 79 1 ubiK Ubiquinone biosynthesis accessory factor UbiK Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q46868 3.54e-33 112 67 0 79 1 ubiK Ubiquinone biosynthesis accessory factor UbiK Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS15565
Feature type CDS
Gene -
Product accessory factor UbiK family protein
Location 108267 - 108527 (strand: -1)
Length 261 (nucleotides) / 86 (amino acids)

Contig

Accession term accessions NZ_VXKB01000005 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 213534 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1115
Orthogroup size 7
N. genomes 7

Actions

Genomic region

Domains

PF04380 Membrane fusogenic activity

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2960 Coenzyme transport and metabolism (H) H Ubiquinone biosynthesis accessory factor UbiK

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K09806 ubiquinone biosynthesis accessory factor UbiK - -

Protein Sequence

MIDPKKIEQIATQLQSALPKGVREIGADIDKKMRAILQSQLGKLDVVNREEFDVQTQVLLRTREKLSQMEKRLAELETRLSAKDGE

Flanking regions ( +/- flanking 50bp)

CGGGTTACTATTTGCAGCATTAAGACTCTCCGGCTCATAAAGGAAAAATCATGATTGACCCGAAAAAAATTGAACAAATTGCCACACAGTTGCAAAGCGCACTGCCGAAAGGTGTGCGGGAAATCGGGGCAGATATCGATAAAAAAATGCGGGCTATTTTGCAGTCTCAGCTCGGTAAGCTGGATGTGGTCAACCGCGAAGAGTTTGATGTGCAGACTCAGGTGTTATTACGCACCCGCGAGAAACTGTCTCAGATGGAAAAACGTCTGGCAGAATTAGAAACCCGCCTGTCAGCAAAAGACGGCGAGTAATGTAGCGAATAATGTGAACAGGAGATACACCCCGTGTACCTCCTGTCTAA