Homologs in group_1115

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_06360 FBDBKF_06360 70.9 Morganella morganii S1 ubiK Ubiquinone biosynthesis accessory factor UbiK
EHELCC_09405 EHELCC_09405 70.9 Morganella morganii S2 ubiK Ubiquinone biosynthesis accessory factor UbiK
NLDBIP_09785 NLDBIP_09785 70.9 Morganella morganii S4 ubiK Ubiquinone biosynthesis accessory factor UbiK
LHKJJB_07970 LHKJJB_07970 70.9 Morganella morganii S3 ubiK Ubiquinone biosynthesis accessory factor UbiK
HKOGLL_07520 HKOGLL_07520 70.9 Morganella morganii S5 ubiK Ubiquinone biosynthesis accessory factor UbiK
F4V73_RS15565 F4V73_RS15565 66.3 Morganella psychrotolerans - accessory factor UbiK family protein

Distribution of the homologs in the orthogroup group_1115

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1115

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q8ZLY9 3.13e-36 122 74 0 78 1 ubiK Ubiquinone biosynthesis accessory factor UbiK Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q46868 5.32e-34 115 70 0 77 1 ubiK Ubiquinone biosynthesis accessory factor UbiK Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS11645
Feature type CDS
Gene -
Product accessory factor UbiK family protein
Location 2573238 - 2573552 (strand: 1)
Length 315 (nucleotides) / 104 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1115
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF04380 Membrane fusogenic activity

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2960 Coenzyme transport and metabolism (H) H Ubiquinone biosynthesis accessory factor UbiK

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K09806 ubiquinone biosynthesis accessory factor UbiK - -

Protein Sequence

MLDPKKIEQVARQIQNVLPQGIKDLGDDIDKKIRAILQSQLNKLDLVNREEFDVQTQVLLRTREKLARLEQRLNELEAGQQAPAEVAQIEEVDVIVETGNDSKA

Flanking regions ( +/- flanking 50bp)

CCCTCATATTACACTTAGCATAGCTTTCTATTTTATTGTGAGGACTATCCATGCTGGACCCAAAAAAAATTGAACAAGTCGCTCGCCAAATCCAAAATGTACTACCACAAGGTATCAAAGATTTAGGTGATGATATTGATAAGAAAATCCGTGCAATACTTCAATCTCAATTAAACAAATTAGATTTGGTTAATCGCGAAGAATTTGATGTGCAAACACAAGTGCTGTTACGTACTCGCGAAAAATTGGCTCGTTTAGAGCAACGTTTAAATGAGTTGGAAGCAGGACAACAAGCGCCAGCGGAAGTTGCACAGATTGAAGAAGTTGATGTTATTGTTGAAACTGGGAATGACAGTAAAGCTTAGTTGATAGTGTAATAACACCCTGTGCCACATTCGGACAGGGTGTTTTCTCA