COG2960


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG2960, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Ubiquinone biosynthesis accessory factor UbiK
Function(s) descr. Coenzyme transport and metabolism (H)

Occurence in the database

COG2960 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1115 FBDBKF_06360 105554 105814 1 ubiK Ubiquinone biosynthesis accessory factor UbiK Morganella morganii S1
1 group_1115 EHELCC_09405 106126 106386 1 ubiK Ubiquinone biosynthesis accessory factor UbiK Morganella morganii S2
2 group_1115 NLDBIP_09785 106126 106386 1 ubiK Ubiquinone biosynthesis accessory factor UbiK Morganella morganii S4
3 group_1115 LHKJJB_07970 110852 111112 -1 ubiK Ubiquinone biosynthesis accessory factor UbiK Morganella morganii S3
4 group_1115 HKOGLL_07520 110852 111112 -1 ubiK Ubiquinone biosynthesis accessory factor UbiK Morganella morganii S5
5 group_1115 F4V73_RS15565 108267 108527 -1 accessory factor UbiK family protein Morganella psychrotolerans
6 group_1115 PMI_RS11645 2573238 2573552 1 accessory factor UbiK family protein Proteus mirabilis HI4320