Homologs in group_1128

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_06440 FBDBKF_06440 80.4 Morganella morganii S1 fkpB FKBP-type peptidyl-prolyl cis-trans isomerase
EHELCC_09485 EHELCC_09485 80.4 Morganella morganii S2 fkpB FKBP-type peptidyl-prolyl cis-trans isomerase
NLDBIP_09865 NLDBIP_09865 80.4 Morganella morganii S4 fkpB FKBP-type peptidyl-prolyl cis-trans isomerase
LHKJJB_07890 LHKJJB_07890 80.4 Morganella morganii S3 fkpB FKBP-type peptidyl-prolyl cis-trans isomerase
HKOGLL_07440 HKOGLL_07440 80.4 Morganella morganii S5 fkpB FKBP-type peptidyl-prolyl cis-trans isomerase
PMI_RS00085 PMI_RS00085 67.1 Proteus mirabilis HI4320 fkpB FKBP-type peptidyl-prolyl cis-trans isomerase

Distribution of the homologs in the orthogroup group_1128

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1128

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0AEM3 7.63e-52 164 57 0 138 3 fkpB FKBP-type 16 kDa peptidyl-prolyl cis-trans isomerase Shigella flexneri
P0AEM0 7.63e-52 164 57 0 138 1 fkpB FKBP-type 16 kDa peptidyl-prolyl cis-trans isomerase Escherichia coli (strain K12)
P0AEM1 7.63e-52 164 57 0 138 3 fkpB FKBP-type 16 kDa peptidyl-prolyl cis-trans isomerase Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0AEM2 7.63e-52 164 57 0 138 3 fkpB FKBP-type 16 kDa peptidyl-prolyl cis-trans isomerase Escherichia coli O157:H7
P21863 1.72e-29 107 40 2 137 3 yaaD Probable FKBP-type 16 kDa peptidyl-prolyl cis-trans isomerase Pseudomonas fluorescens
O52980 8.25e-14 67 29 3 155 1 None Short-type peptidyl-prolyl cis-trans isomerase Methanothermococcus thermolithotrophicus
Q57726 3.56e-13 65 30 5 156 3 MJ0278 Short-type peptidyl-prolyl cis-trans isomerase Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
Q58235 2.21e-11 62 32 2 114 1 MJ0825 Long-type peptidyl-prolyl cis-trans isomerase Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
Q9KNX6 4.2e-10 58 34 5 147 1 slyD FKBP-type peptidyl-prolyl cis-trans isomerase SlyD Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
O83369 2.28e-09 56 29 3 144 1 slyD FKBP-type peptidyl-prolyl cis-trans isomerase SlyD Treponema pallidum (strain Nichols)
Q6CGG3 2.02e-08 53 37 0 70 3 FPR2 FK506-binding protein 2 Yarrowia lipolytica (strain CLIB 122 / E 150)
Q7CFU4 3.92e-08 53 31 3 146 1 slyD FKBP-type peptidyl-prolyl cis-trans isomerase SlyD Yersinia pestis
O27197 5.06e-08 53 31 2 105 1 MTH_1125 Long-type peptidyl-prolyl cis-trans isomerase Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H)
P0A9L2 8.84e-08 52 29 4 147 3 slyD FKBP-type peptidyl-prolyl cis-trans isomerase SlyD Shigella flexneri
P0A9K9 8.84e-08 52 29 4 147 1 slyD FKBP-type peptidyl-prolyl cis-trans isomerase SlyD Escherichia coli (strain K12)
P0A9L0 8.84e-08 52 29 4 147 3 slyD FKBP-type peptidyl-prolyl cis-trans isomerase SlyD Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0A9L1 8.84e-08 52 29 4 147 3 slyD FKBP-type peptidyl-prolyl cis-trans isomerase SlyD Escherichia coli O157:H7
O07046 6.49e-07 50 30 2 133 3 slyD FKBP-type peptidyl-prolyl cis-trans isomerase SlyD Aeromonas hydrophila
Q38935 3.7e-06 47 34 0 70 2 FKBP15-1 Peptidyl-prolyl cis-trans isomerase FKBP15-1 Arabidopsis thaliana
P44830 9.56e-06 46 29 5 146 3 slyD FKBP-type peptidyl-prolyl cis-trans isomerase SlyD Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q38936 1.68e-05 45 32 0 70 2 FKBP15-2 Peptidyl-prolyl cis-trans isomerase FKBP15-2 Arabidopsis thaliana
Q9CKP2 5.92e-05 44 28 5 146 1 slyD FKBP-type peptidyl-prolyl cis-trans isomerase SlyD Pasteurella multocida (strain Pm70)
Q32PA9 0.000202 42 31 0 70 2 FKBP2 Peptidyl-prolyl cis-trans isomerase FKBP2 Bos taurus
Q41649 0.000209 42 32 0 70 1 FKBP15 FK506-binding protein 2 Vicia faba
P26885 0.000218 42 31 0 70 1 FKBP2 Peptidyl-prolyl cis-trans isomerase FKBP2 Homo sapiens
P45878 0.000258 42 31 0 70 1 Fkbp2 Peptidyl-prolyl cis-trans isomerase FKBP2 Mus musculus
Q4WMV5 0.001 41 30 1 69 3 fpr4 FK506-binding protein 4 Aspergillus fumigatus (strain ATCC MYA-4609 / CBS 101355 / FGSC A1100 / Af293)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS15485
Feature type CDS
Gene fkpB
Product FKBP-type peptidyl-prolyl cis-trans isomerase
Location 86663 - 87094 (strand: 1)
Length 432 (nucleotides) / 143 (amino acids)

Contig

Accession term accessions NZ_VXKB01000005 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 213534 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1128
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1047 Posttranslational modification, protein turnover, chaperones (O) O Peptidyl-prolyl cis-trans isomerase, FKBP type

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03774 FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8] - -

Protein Sequence

MQAEKHHSVLLDFTLKLADGSVADSTEAQGKPALFRLGDGSLSPELELELLGLSAGDKKTFTLPGETIFGKPSPELIQFFSPSDFTETGLPEIGTIMLFGAMNGSEMPGLVKSVSDESVEVDFNHPLSGQDITFDIVVREVTE

Flanking regions ( +/- flanking 50bp)

GCCTTCCGGCGGATATTTTTTATCTGATATAAAGACAAAGAGCGATAATAATGCAGGCAGAAAAACATCACAGCGTATTACTGGATTTCACCTTAAAGCTGGCGGATGGCTCCGTTGCAGACTCCACTGAAGCACAGGGTAAGCCGGCACTGTTTCGCCTGGGTGACGGTAGTTTGTCACCGGAACTCGAACTGGAGCTGCTCGGATTGTCGGCCGGGGATAAAAAAACCTTCACGCTGCCCGGTGAGACTATTTTCGGCAAGCCAAGTCCGGAGCTTATTCAATTTTTCTCCCCGTCTGATTTTACAGAGACAGGCTTACCTGAAATCGGCACAATTATGCTGTTTGGTGCCATGAACGGCAGTGAAATGCCGGGACTTGTCAAATCTGTCTCGGATGAGTCTGTTGAAGTCGATTTCAATCATCCTCTTTCCGGGCAGGACATCACGTTTGACATTGTTGTCCGTGAAGTCACTGAATAATTCGTATATACCCAACGTCATTCAGGATGCTGCCAACGAATCTGTGGTTT