Homologs in group_2299

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_17675 FBDBKF_17675 97.3 Morganella morganii S1 nudC NAD(+) diphosphatase
EHELCC_18160 EHELCC_18160 97.3 Morganella morganii S2 nudC NAD(+) diphosphatase
NLDBIP_17990 NLDBIP_17990 97.3 Morganella morganii S4 nudC NAD(+) diphosphatase
LHKJJB_18185 LHKJJB_18185 97.3 Morganella morganii S3 nudC NAD(+) diphosphatase
HKOGLL_18015 HKOGLL_18015 97.3 Morganella morganii S5 nudC NAD(+) diphosphatase
PMI_RS13705 PMI_RS13705 72.3 Proteus mirabilis HI4320 nudC NAD(+) diphosphatase

Distribution of the homologs in the orthogroup group_2299

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2299

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q7N961 8.14e-136 385 71 1 255 3 nudC NAD-capped RNA hydrolase NudC Photorhabdus laumondii subsp. laumondii (strain DSM 15139 / CIP 105565 / TT01)
A1JIJ0 7.07e-129 368 65 1 259 3 nudC NAD-capped RNA hydrolase NudC Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)
B1JJK8 9.52e-127 363 65 1 258 3 nudC NAD-capped RNA hydrolase NudC Yersinia pseudotuberculosis serotype O:3 (strain YPIII)
Q66FP3 9.52e-127 363 65 1 258 3 nudC NAD-capped RNA hydrolase NudC Yersinia pseudotuberculosis serotype I (strain IP32953)
B2K122 9.52e-127 363 65 1 258 3 nudC NAD-capped RNA hydrolase NudC Yersinia pseudotuberculosis serotype IB (strain PB1/+)
A7FNH4 9.52e-127 363 65 1 258 3 nudC NAD-capped RNA hydrolase NudC Yersinia pseudotuberculosis serotype O:1b (strain IP 31758)
A4TS22 8.51e-126 360 65 1 258 3 nudC NAD-capped RNA hydrolase NudC Yersinia pestis (strain Pestoides F)
Q1CN68 8.51e-126 360 65 1 258 3 nudC NAD-capped RNA hydrolase NudC Yersinia pestis bv. Antiqua (strain Nepal516)
A9R8D3 8.51e-126 360 65 1 258 3 nudC NAD-capped RNA hydrolase NudC Yersinia pestis bv. Antiqua (strain Angola)
Q8ZAQ5 8.51e-126 360 65 1 258 3 nudC NAD-capped RNA hydrolase NudC Yersinia pestis
Q1C1V1 8.51e-126 360 65 1 258 3 nudC NAD-capped RNA hydrolase NudC Yersinia pestis bv. Antiqua (strain Antiqua)
Q6DAL8 4.63e-124 356 64 1 259 3 nudC NAD-capped RNA hydrolase NudC Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672)
C6DHS8 5.25e-123 353 64 1 259 3 nudC NAD-capped RNA hydrolase NudC Pectobacterium carotovorum subsp. carotovorum (strain PC1)
C0Q2S8 6.48e-122 350 64 1 256 3 nudC NAD-capped RNA hydrolase NudC Salmonella paratyphi C (strain RKS4594)
Q57H59 6.48e-122 350 64 1 256 3 nudC NAD-capped RNA hydrolase NudC Salmonella choleraesuis (strain SC-B67)
B5XYE2 2.54e-121 349 63 1 258 3 nudC NAD-capped RNA hydrolase NudC Klebsiella pneumoniae (strain 342)
A4W5B9 3.5e-121 348 63 1 258 3 nudC NAD-capped RNA hydrolase NudC Enterobacter sp. (strain 638)
C5BHE7 5.59e-121 348 63 1 258 3 nudC NAD-capped RNA hydrolase NudC Edwardsiella ictaluri (strain 93-146)
B5BJR5 1.97e-120 347 64 1 256 3 nudC NAD-capped RNA hydrolase NudC Salmonella paratyphi A (strain AKU_12601)
A9N0K8 1.97e-120 347 64 1 256 3 nudC NAD-capped RNA hydrolase NudC Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
Q5PKA4 1.97e-120 347 64 1 256 3 nudC NAD-capped RNA hydrolase NudC Salmonella paratyphi A (strain ATCC 9150 / SARB42)
B4T0Z8 1.97e-120 347 64 1 256 3 nudC NAD-capped RNA hydrolase NudC Salmonella newport (strain SL254)
B5RFI8 1.97e-120 347 64 1 256 3 nudC NAD-capped RNA hydrolase NudC Salmonella gallinarum (strain 287/91 / NCTC 13346)
B5QYF1 1.97e-120 347 64 1 256 3 nudC NAD-capped RNA hydrolase NudC Salmonella enteritidis PT4 (strain P125109)
B5FQL1 1.97e-120 347 64 1 256 3 nudC NAD-capped RNA hydrolase NudC Salmonella dublin (strain CT_02021853)
A6TGQ3 1.97e-120 347 63 1 258 3 nudC NAD-capped RNA hydrolase NudC Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578)
B1LNU8 2.99e-120 346 63 1 258 3 nudC NAD-capped RNA hydrolase NudC Escherichia coli (strain SMS-3-5 / SECEC)
B7NRS9 2.99e-120 346 63 1 258 3 nudC NAD-capped RNA hydrolase NudC Escherichia coli O7:K1 (strain IAI39 / ExPEC)
B5F1H9 3.02e-120 346 63 1 256 3 nudC NAD-capped RNA hydrolase NudC Salmonella agona (strain SL483)
Q9L9I5 3.26e-120 346 64 1 256 3 nudC NAD-capped RNA hydrolase NudC Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q32AG9 4.83e-120 346 64 1 258 3 nudC NAD-capped RNA hydrolase NudC Shigella dysenteriae serotype 1 (strain Sd197)
Q0SY04 7.01e-120 345 63 1 258 3 nudC NAD-capped RNA hydrolase NudC Shigella flexneri serotype 5b (strain 8401)
B7NFT7 7.01e-120 345 63 1 258 3 nudC NAD-capped RNA hydrolase NudC Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC)
B4TQK6 7.49e-120 345 63 1 256 3 nudC NAD-capped RNA hydrolase NudC Salmonella schwarzengrund (strain CVM19633)
B4TCT5 8.82e-120 345 63 1 256 3 nudC NAD-capped RNA hydrolase NudC Salmonella heidelberg (strain SL476)
Q3YUY8 1.12e-119 345 63 1 258 3 nudC NAD-capped RNA hydrolase NudC Shigella sonnei (strain Ss046)
B7LUK6 1.12e-119 345 63 1 258 3 nudC NAD-capped RNA hydrolase NudC Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CCUG 18766 / IAM 14443 / JCM 21226 / LMG 7866 / NBRC 102419 / NCTC 12128 / CDC 0568-73)
B6I5K7 1.12e-119 345 63 1 258 3 nudC NAD-capped RNA hydrolase NudC Escherichia coli (strain SE11)
P32664 1.12e-119 345 63 1 258 1 nudC NAD-capped RNA hydrolase NudC Escherichia coli (strain K12)
B1IUQ1 1.12e-119 345 63 1 258 3 nudC NAD-capped RNA hydrolase NudC Escherichia coli (strain ATCC 8739 / DSM 1576 / NBRC 3972 / NCIMB 8545 / WDCM 00012 / Crooks)
A8A796 1.12e-119 345 63 1 258 3 nudC NAD-capped RNA hydrolase NudC Escherichia coli O9:H4 (strain HS)
B1XBZ9 1.12e-119 345 63 1 258 3 nudC NAD-capped RNA hydrolase NudC Escherichia coli (strain K12 / DH10B)
C5A0T7 1.12e-119 345 63 1 258 3 nudC NAD-capped RNA hydrolase NudC Escherichia coli (strain K12 / MC4100 / BW2952)
B7M7Q5 1.12e-119 345 63 1 258 3 nudC NAD-capped RNA hydrolase NudC Escherichia coli O8 (strain IAI1)
B7LA85 1.12e-119 345 63 1 258 3 nudC NAD-capped RNA hydrolase NudC Escherichia coli (strain 55989 / EAEC)
A7ZUL1 1.12e-119 345 63 1 258 3 nudC NAD-capped RNA hydrolase NudC Escherichia coli O139:H28 (strain E24377A / ETEC)
Q8FB75 1.32e-119 345 63 1 258 3 nudC NAD-capped RNA hydrolase NudC Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q0TA69 1.32e-119 345 63 1 258 3 nudC NAD-capped RNA hydrolase NudC Escherichia coli O6:K15:H31 (strain 536 / UPEC)
B7N2J8 1.32e-119 345 63 1 258 3 nudC NAD-capped RNA hydrolase NudC Escherichia coli O81 (strain ED1a)
B7UPF1 1.32e-119 345 63 1 258 3 nudC NAD-capped RNA hydrolase NudC Escherichia coli O127:H6 (strain E2348/69 / EPEC)
Q83IS3 1.35e-119 345 63 1 258 3 nudC NAD-capped RNA hydrolase NudC Shigella flexneri
Q31U01 1.56e-119 344 63 1 258 3 nudC NAD-capped RNA hydrolase NudC Shigella boydii serotype 4 (strain Sb227)
B2TWI3 1.56e-119 344 63 1 258 3 nudC NAD-capped RNA hydrolase NudC Shigella boydii serotype 18 (strain CDC 3083-94 / BS512)
Q1R5W2 3.24e-119 343 63 1 258 3 nudC NAD-capped RNA hydrolase NudC Escherichia coli (strain UTI89 / UPEC)
A1AIG7 3.24e-119 343 63 1 258 3 nudC NAD-capped RNA hydrolase NudC Escherichia coli O1:K1 / APEC
B7MIY2 3.24e-119 343 63 1 258 3 nudC NAD-capped RNA hydrolase NudC Escherichia coli O45:K1 (strain S88 / ExPEC)
Q8Z328 3.58e-119 343 63 1 256 3 nudC NAD-capped RNA hydrolase NudC Salmonella typhi
B5Z092 5.55e-119 343 63 1 258 3 nudC NAD-capped RNA hydrolase NudC Escherichia coli O157:H7 (strain EC4115 / EHEC)
Q8X6X7 5.55e-119 343 63 1 258 3 nudC NAD-capped RNA hydrolase NudC Escherichia coli O157:H7
A7MJ81 1.92e-117 339 62 1 258 3 nudC NAD-capped RNA hydrolase NudC Cronobacter sakazakii (strain ATCC BAA-894)
A8AKS7 4.14e-117 338 62 1 258 3 nudC NAD-capped RNA hydrolase NudC Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696)
B2VG76 7.17e-116 335 60 1 260 3 nudC NAD-capped RNA hydrolase NudC Erwinia tasmaniensis (strain DSM 17950 / CFBP 7177 / CIP 109463 / NCPPB 4357 / Et1/99)
P57965 7.44e-79 241 47 4 258 3 nudC NAD-capped RNA hydrolase NudC Pasteurella multocida (strain Pm70)
A5UA57 5.44e-74 229 44 3 259 3 nudC NAD-capped RNA hydrolase NudC Haemophilus influenzae (strain PittEE)
Q4QNB3 5.44e-74 229 44 3 259 3 nudC NAD-capped RNA hydrolase NudC Haemophilus influenzae (strain 86-028NP)
A5UGU3 6.2e-74 229 44 3 259 3 nudC NAD-capped RNA hydrolase NudC Haemophilus influenzae (strain PittGG)
P44710 2.1e-73 228 44 3 259 3 nudC NAD-capped RNA hydrolase NudC Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
A6VQT1 4.42e-71 222 44 5 256 3 nudC NAD-capped RNA hydrolase NudC Actinobacillus succinogenes (strain ATCC 55618 / DSM 22257 / CCUG 43843 / 130Z)
C3LR63 1.39e-70 221 45 3 251 3 nudC NAD-capped RNA hydrolase NudC Vibrio cholerae serotype O1 (strain M66-2)
Q9KV27 1.39e-70 221 45 3 251 3 nudC NAD-capped RNA hydrolase NudC Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
A5F3M9 1.39e-70 221 45 3 251 3 nudC NAD-capped RNA hydrolase NudC Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395)
Q65W71 9.44e-69 216 42 5 267 3 nudC NAD-capped RNA hydrolase NudC Mannheimia succiniciproducens (strain KCTC 0769BP / MBEL55E)
Q8DD17 1.75e-67 212 42 2 252 3 nudC NAD-capped RNA hydrolase NudC Vibrio vulnificus (strain CMCP6)
Q6LLW5 5.8e-67 211 41 2 254 3 nudC NAD-capped RNA hydrolase NudC Photobacterium profundum (strain SS9)
Q87KQ7 6.82e-66 208 43 3 245 3 nudC NAD-capped RNA hydrolase NudC Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
B7VM66 1.74e-64 205 42 2 250 3 nudC NAD-capped RNA hydrolase NudC Vibrio atlanticus (strain LGP32)
Q9RV62 5.96e-52 173 37 3 251 3 nudC NAD-capped RNA hydrolase NudC Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / CCUG 27074 / LMG 4051 / NBRC 15346 / NCIMB 9279 / VKM B-1422 / R1)
A4VLQ5 2.5e-49 166 41 2 212 3 nudC NAD-capped RNA hydrolase NudC Stutzerimonas stutzeri (strain A1501)
Q1IBF8 3.24e-48 164 38 6 262 3 nudC NAD-capped RNA hydrolase NudC Pseudomonas entomophila (strain L48)
Q3KC83 5.22e-46 158 37 7 262 3 nudC NAD-capped RNA hydrolase NudC Pseudomonas fluorescens (strain Pf0-1)
Q48IH8 6.47e-46 157 37 4 251 3 nudC NAD-capped RNA hydrolase NudC Pseudomonas savastanoi pv. phaseolicola (strain 1448A / Race 6)
Q4ZTN0 7.13e-46 157 41 3 212 3 nudC NAD-capped RNA hydrolase NudC Pseudomonas syringae pv. syringae (strain B728a)
Q4KBL2 1.43e-45 157 42 3 212 3 nudC NAD-capped RNA hydrolase NudC Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5)
Q882A9 2.15e-45 156 40 3 212 3 nudC NAD-capped RNA hydrolase NudC Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000)
Q7NTZ8 3.02e-43 150 37 3 239 3 nudC NAD-capped RNA hydrolase NudC Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / CCUG 213 / NBRC 12614 / NCIMB 9131 / NCTC 9757 / MK)
B0KMR5 1.75e-42 149 42 3 212 3 nudC NAD-capped RNA hydrolase NudC Pseudomonas putida (strain GB-1)
A5W1F2 4.53e-42 147 42 3 212 3 nudC NAD-capped RNA hydrolase NudC Pseudomonas putida (strain ATCC 700007 / DSM 6899 / JCM 31910 / BCRC 17059 / LMG 24140 / F1)
Q88FQ8 1.11e-41 147 42 3 212 3 nudC NAD-capped RNA hydrolase NudC Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440)
B1J6H6 1.07e-40 144 41 3 212 3 nudC NAD-capped RNA hydrolase NudC Pseudomonas putida (strain W619)
Q02KW6 4e-36 132 38 3 212 3 nudC NAD-capped RNA hydrolase NudC Pseudomonas aeruginosa (strain UCBPP-PA14)
O86062 4.26e-36 132 38 3 212 3 nudC NAD-capped RNA hydrolase NudC Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
B7VB54 4.44e-36 132 38 3 212 3 nudC NAD-capped RNA hydrolase NudC Pseudomonas aeruginosa (strain LESB58)
A6V6Z8 5.86e-35 129 38 2 212 3 nudC NAD-capped RNA hydrolase NudC Pseudomonas aeruginosa (strain PA7)
Q9DCN1 2.58e-24 104 33 4 181 1 Nudt12 NAD-capped RNA hydrolase NUDT12 Mus musculus
Q5RD76 4.07e-24 103 33 3 176 2 NUDT12 NAD-capped RNA hydrolase NUDT12 Pongo abelii
Q29RH3 4.95e-24 103 33 4 181 2 NUDT12 NAD-capped RNA hydrolase NUDT12 Bos taurus
Q9BQG2 9.22e-24 102 33 3 176 1 NUDT12 NAD-capped RNA hydrolase NUDT12 Homo sapiens
Q94A82 1.02e-23 102 36 4 165 1 NUDT19 Nudix hydrolase 19, chloroplastic Arabidopsis thaliana
Q4R7L8 2.57e-23 101 32 3 176 2 NUDT12 NAD-capped RNA hydrolase NUDT12 Macaca fascicularis
C1AGW8 5.15e-23 98 31 8 235 3 nudC NAD-capped RNA hydrolase NudC Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019)
A1KNJ7 5.15e-23 98 31 8 235 3 nudC NAD-capped RNA hydrolase NudC Mycobacterium bovis (strain BCG / Pasteur 1173P2)
Q7TX14 5.15e-23 98 31 8 235 3 nudC NAD-capped RNA hydrolase NudC Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
P9WIX5 8.02e-22 95 30 8 235 3 nudC NAD-capped RNA hydrolase NudC Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WIX4 8.02e-22 95 30 8 235 3 nudC NAD-capped RNA hydrolase NudC Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
A5U7L9 8.02e-22 95 30 8 235 3 nudC NAD-capped RNA hydrolase NudC Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra)
Q8JZU0 1.27e-19 90 31 4 185 1 Nudt13 NAD(P)H pyrophosphatase NUDT13, mitochondrial Mus musculus
Q9Y7J0 4.82e-19 88 40 6 142 3 SPBC1778.03c NAD-capped RNA hydrolase Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Q86X67 1.15e-17 84 29 4 185 1 NUDT13 NAD(P)H pyrophosphatase NUDT13, mitochondrial Homo sapiens
Q19427 1.16e-17 84 37 5 138 1 ndx-9 NAD-capped RNA hydrolase ndx-9 Caenorhabditis elegans
P53164 4.59e-15 77 29 7 195 1 NPY1 NAD-capped RNA hydrolase NPY1 Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Q9CA40 6.76e-08 53 28 2 118 1 NUDT1 Nudix hydrolase 1 Arabidopsis thaliana
Q58549 1.06e-07 53 30 3 121 1 nudF ADP-ribose pyrophosphatase Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
P93740 2.37e-07 54 26 6 178 1 NUDT23 Nudix hydrolase 23, chloroplastic Arabidopsis thaliana
M4I1C6 6.84e-07 51 27 1 117 1 NUDIX1 Geranyl diphosphate phosphohydrolase Rosa hybrid cultivar

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS15055
Feature type CDS
Gene nudC
Product NAD(+) diphosphatase
Location 250083 - 250865 (strand: 1)
Length 783 (nucleotides) / 260 (amino acids)

Contig

Accession term accessions NZ_VXKB01000004 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 258164 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2299
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF00293 NUDIX domain
PF09297 NADH pyrophosphatase zinc ribbon domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2816 Nucleotide transport and metabolism (F) F NADH pyrophosphatase NudC, Nudix superfamily

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03426 NAD+ diphosphatase [EC:3.6.1.22] Nicotinate and nicotinamide metabolism
Metabolic pathways
Peroxisome		 -

Protein Sequence

MQQILTGDETGYWVISADNRVWLPEGQLPEGSAAQWMLTGKPAVRIGEWQGLPVWLIREKMRSDMCSPRIIAADNDDLFKMAGRGVQLAEFYRSHRYCGYCGAAMKYSESEWACLCDACRERYYPQIAPCIIVGIRRHDSILLAQHRRHKNAPLFTVLAGFVEVGETLEEAVAREVMEESRIEIQNIRYVSSQPWPFPHSLMMGFLADYADGEIHHDPGELLSADWYHYDNLPVIPPPDTIARRLIEDTVALCRQDDEDA

Flanking regions ( +/- flanking 50bp)

AGAGTATGATTTAATTCATCAATACTTTATTAACAAGATATCGTGAAACTATGCAGCAGATTTTAACGGGCGATGAAACAGGGTATTGGGTGATAAGCGCAGATAACCGGGTCTGGCTGCCGGAAGGGCAATTACCGGAAGGAAGTGCGGCGCAATGGATGCTGACCGGCAAACCGGCAGTGCGTATCGGTGAATGGCAGGGACTGCCGGTCTGGCTCATCCGTGAAAAAATGCGCTCGGATATGTGTTCACCCCGCATTATTGCCGCAGATAATGATGATTTATTCAAAATGGCCGGACGCGGCGTGCAGCTTGCGGAATTTTACCGCTCGCACCGCTACTGCGGCTATTGCGGTGCGGCAATGAAATACAGCGAAAGTGAATGGGCATGTCTGTGTGATGCCTGCCGCGAACGTTATTATCCGCAGATAGCGCCGTGCATTATTGTCGGTATCCGCCGTCATGATTCTATTCTGCTGGCACAGCACCGCCGCCATAAAAATGCGCCGCTGTTTACTGTGCTTGCCGGGTTTGTGGAAGTGGGGGAAACCCTGGAAGAAGCGGTTGCCCGCGAAGTAATGGAAGAGAGCCGCATTGAAATTCAGAATATCCGCTATGTGTCTTCTCAGCCGTGGCCGTTCCCGCACTCACTGATGATGGGCTTTCTGGCGGATTATGCCGACGGTGAAATTCACCATGATCCGGGCGAACTGCTCAGTGCGGACTGGTATCACTATGATAACCTGCCGGTTATTCCGCCGCCGGATACCATTGCCCGCCGCCTGATTGAAGACACGGTTGCACTGTGCCGTCAGGATGATGAAGACGCGTGATACTGCCCTGAACACAGCCCTGATTATAAGCAATATGCATGCTACAATGC