Homologs in group_2299

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_17675 FBDBKF_17675 72.7 Morganella morganii S1 nudC NAD(+) diphosphatase
EHELCC_18160 EHELCC_18160 72.7 Morganella morganii S2 nudC NAD(+) diphosphatase
NLDBIP_17990 NLDBIP_17990 72.7 Morganella morganii S4 nudC NAD(+) diphosphatase
LHKJJB_18185 LHKJJB_18185 72.7 Morganella morganii S3 nudC NAD(+) diphosphatase
HKOGLL_18015 HKOGLL_18015 72.7 Morganella morganii S5 nudC NAD(+) diphosphatase
F4V73_RS15055 F4V73_RS15055 72.3 Morganella psychrotolerans nudC NAD(+) diphosphatase

Distribution of the homologs in the orthogroup group_2299

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2299

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q7N961 5.87e-130 371 70 1 250 3 nudC NAD-capped RNA hydrolase NudC Photorhabdus laumondii subsp. laumondii (strain DSM 15139 / CIP 105565 / TT01)
A1JIJ0 1.93e-123 354 64 1 253 3 nudC NAD-capped RNA hydrolase NudC Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)
Q6DAL8 6.63e-122 350 63 1 256 3 nudC NAD-capped RNA hydrolase NudC Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672)
C6DHS8 4.5e-121 348 63 1 256 3 nudC NAD-capped RNA hydrolase NudC Pectobacterium carotovorum subsp. carotovorum (strain PC1)
A4TS22 7.69e-121 348 64 1 256 3 nudC NAD-capped RNA hydrolase NudC Yersinia pestis (strain Pestoides F)
Q1CN68 7.69e-121 348 64 1 256 3 nudC NAD-capped RNA hydrolase NudC Yersinia pestis bv. Antiqua (strain Nepal516)
A9R8D3 7.69e-121 348 64 1 256 3 nudC NAD-capped RNA hydrolase NudC Yersinia pestis bv. Antiqua (strain Angola)
Q8ZAQ5 7.69e-121 348 64 1 256 3 nudC NAD-capped RNA hydrolase NudC Yersinia pestis
Q1C1V1 7.69e-121 348 64 1 256 3 nudC NAD-capped RNA hydrolase NudC Yersinia pestis bv. Antiqua (strain Antiqua)
B1JJK8 3.26e-120 346 64 1 256 3 nudC NAD-capped RNA hydrolase NudC Yersinia pseudotuberculosis serotype O:3 (strain YPIII)
Q66FP3 3.26e-120 346 64 1 256 3 nudC NAD-capped RNA hydrolase NudC Yersinia pseudotuberculosis serotype I (strain IP32953)
B2K122 3.26e-120 346 64 1 256 3 nudC NAD-capped RNA hydrolase NudC Yersinia pseudotuberculosis serotype IB (strain PB1/+)
A7FNH4 3.26e-120 346 64 1 256 3 nudC NAD-capped RNA hydrolase NudC Yersinia pseudotuberculosis serotype O:1b (strain IP 31758)
C5BHE7 9.1e-116 335 62 1 254 3 nudC NAD-capped RNA hydrolase NudC Edwardsiella ictaluri (strain 93-146)
A7MJ81 4.85e-115 333 61 1 255 3 nudC NAD-capped RNA hydrolase NudC Cronobacter sakazakii (strain ATCC BAA-894)
B5BJR5 4.8e-113 328 62 1 248 3 nudC NAD-capped RNA hydrolase NudC Salmonella paratyphi A (strain AKU_12601)
A9N0K8 4.8e-113 328 62 1 248 3 nudC NAD-capped RNA hydrolase NudC Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
Q5PKA4 4.8e-113 328 62 1 248 3 nudC NAD-capped RNA hydrolase NudC Salmonella paratyphi A (strain ATCC 9150 / SARB42)
B4T0Z8 4.8e-113 328 62 1 248 3 nudC NAD-capped RNA hydrolase NudC Salmonella newport (strain SL254)
B5RFI8 4.8e-113 328 62 1 248 3 nudC NAD-capped RNA hydrolase NudC Salmonella gallinarum (strain 287/91 / NCTC 13346)
B5QYF1 4.8e-113 328 62 1 248 3 nudC NAD-capped RNA hydrolase NudC Salmonella enteritidis PT4 (strain P125109)
B5FQL1 4.8e-113 328 62 1 248 3 nudC NAD-capped RNA hydrolase NudC Salmonella dublin (strain CT_02021853)
B5F1H9 8.3e-113 327 62 1 248 3 nudC NAD-capped RNA hydrolase NudC Salmonella agona (strain SL483)
B4TCT5 8.39e-113 327 62 1 248 3 nudC NAD-capped RNA hydrolase NudC Salmonella heidelberg (strain SL476)
A8AKS7 9.06e-113 327 61 1 250 3 nudC NAD-capped RNA hydrolase NudC Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696)
Q9L9I5 2.2e-112 326 62 1 248 3 nudC NAD-capped RNA hydrolase NudC Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
B4TQK6 2.27e-112 326 62 1 248 3 nudC NAD-capped RNA hydrolase NudC Salmonella schwarzengrund (strain CVM19633)
Q8Z328 2.8e-112 326 62 1 248 3 nudC NAD-capped RNA hydrolase NudC Salmonella typhi
C0Q2S8 4.48e-112 325 62 1 248 3 nudC NAD-capped RNA hydrolase NudC Salmonella paratyphi C (strain RKS4594)
Q57H59 4.48e-112 325 62 1 248 3 nudC NAD-capped RNA hydrolase NudC Salmonella choleraesuis (strain SC-B67)
A6TGQ3 1.12e-111 325 61 1 250 3 nudC NAD-capped RNA hydrolase NudC Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578)
B2VG76 1.73e-111 324 60 1 251 3 nudC NAD-capped RNA hydrolase NudC Erwinia tasmaniensis (strain DSM 17950 / CFBP 7177 / CIP 109463 / NCPPB 4357 / Et1/99)
B7LUK6 2.19e-111 324 60 1 250 3 nudC NAD-capped RNA hydrolase NudC Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CCUG 18766 / IAM 14443 / JCM 21226 / LMG 7866 / NBRC 102419 / NCTC 12128 / CDC 0568-73)
B1LNU8 2.69e-111 323 61 1 250 3 nudC NAD-capped RNA hydrolase NudC Escherichia coli (strain SMS-3-5 / SECEC)
B7NRS9 2.69e-111 323 61 1 250 3 nudC NAD-capped RNA hydrolase NudC Escherichia coli O7:K1 (strain IAI39 / ExPEC)
B5XYE2 3.95e-111 323 61 1 250 3 nudC NAD-capped RNA hydrolase NudC Klebsiella pneumoniae (strain 342)
Q0SY04 4.86e-111 323 61 1 250 3 nudC NAD-capped RNA hydrolase NudC Shigella flexneri serotype 5b (strain 8401)
B7NFT7 4.86e-111 323 61 1 250 3 nudC NAD-capped RNA hydrolase NudC Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC)
Q3YUY8 7.44e-111 322 60 1 250 3 nudC NAD-capped RNA hydrolase NudC Shigella sonnei (strain Ss046)
B6I5K7 7.44e-111 322 60 1 250 3 nudC NAD-capped RNA hydrolase NudC Escherichia coli (strain SE11)
P32664 7.44e-111 322 60 1 250 1 nudC NAD-capped RNA hydrolase NudC Escherichia coli (strain K12)
B1IUQ1 7.44e-111 322 60 1 250 3 nudC NAD-capped RNA hydrolase NudC Escherichia coli (strain ATCC 8739 / DSM 1576 / NBRC 3972 / NCIMB 8545 / WDCM 00012 / Crooks)
A8A796 7.44e-111 322 60 1 250 3 nudC NAD-capped RNA hydrolase NudC Escherichia coli O9:H4 (strain HS)
B1XBZ9 7.44e-111 322 60 1 250 3 nudC NAD-capped RNA hydrolase NudC Escherichia coli (strain K12 / DH10B)
C5A0T7 7.44e-111 322 60 1 250 3 nudC NAD-capped RNA hydrolase NudC Escherichia coli (strain K12 / MC4100 / BW2952)
B7M7Q5 7.44e-111 322 60 1 250 3 nudC NAD-capped RNA hydrolase NudC Escherichia coli O8 (strain IAI1)
B7LA85 7.44e-111 322 60 1 250 3 nudC NAD-capped RNA hydrolase NudC Escherichia coli (strain 55989 / EAEC)
A7ZUL1 7.44e-111 322 60 1 250 3 nudC NAD-capped RNA hydrolase NudC Escherichia coli O139:H28 (strain E24377A / ETEC)
A4W5B9 7.45e-111 322 61 1 250 3 nudC NAD-capped RNA hydrolase NudC Enterobacter sp. (strain 638)
Q8FB75 7.95e-111 322 61 1 250 3 nudC NAD-capped RNA hydrolase NudC Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q0TA69 7.95e-111 322 61 1 250 3 nudC NAD-capped RNA hydrolase NudC Escherichia coli O6:K15:H31 (strain 536 / UPEC)
B7N2J8 7.95e-111 322 61 1 250 3 nudC NAD-capped RNA hydrolase NudC Escherichia coli O81 (strain ED1a)
B7UPF1 7.95e-111 322 61 1 250 3 nudC NAD-capped RNA hydrolase NudC Escherichia coli O127:H6 (strain E2348/69 / EPEC)
Q31U01 8.39e-111 322 60 1 250 3 nudC NAD-capped RNA hydrolase NudC Shigella boydii serotype 4 (strain Sb227)
B2TWI3 8.39e-111 322 60 1 250 3 nudC NAD-capped RNA hydrolase NudC Shigella boydii serotype 18 (strain CDC 3083-94 / BS512)
Q1R5W2 1.19e-110 322 61 1 250 3 nudC NAD-capped RNA hydrolase NudC Escherichia coli (strain UTI89 / UPEC)
A1AIG7 1.19e-110 322 61 1 250 3 nudC NAD-capped RNA hydrolase NudC Escherichia coli O1:K1 / APEC
B7MIY2 1.19e-110 322 61 1 250 3 nudC NAD-capped RNA hydrolase NudC Escherichia coli O45:K1 (strain S88 / ExPEC)
Q83IS3 1.26e-110 322 60 1 250 3 nudC NAD-capped RNA hydrolase NudC Shigella flexneri
B5Z092 5.33e-110 320 60 1 250 3 nudC NAD-capped RNA hydrolase NudC Escherichia coli O157:H7 (strain EC4115 / EHEC)
Q8X6X7 5.33e-110 320 60 1 250 3 nudC NAD-capped RNA hydrolase NudC Escherichia coli O157:H7
Q32AG9 2.41e-109 318 61 1 250 3 nudC NAD-capped RNA hydrolase NudC Shigella dysenteriae serotype 1 (strain Sd197)
A5UA57 3.73e-74 229 47 4 246 3 nudC NAD-capped RNA hydrolase NudC Haemophilus influenzae (strain PittEE)
Q4QNB3 3.73e-74 229 47 4 246 3 nudC NAD-capped RNA hydrolase NudC Haemophilus influenzae (strain 86-028NP)
A5UGU3 4.3e-74 229 46 4 246 3 nudC NAD-capped RNA hydrolase NudC Haemophilus influenzae (strain PittGG)
P44710 5.48e-73 226 46 4 246 3 nudC NAD-capped RNA hydrolase NudC Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P57965 8.49e-72 223 45 4 257 3 nudC NAD-capped RNA hydrolase NudC Pasteurella multocida (strain Pm70)
C3LR63 1.14e-71 223 45 3 255 3 nudC NAD-capped RNA hydrolase NudC Vibrio cholerae serotype O1 (strain M66-2)
Q9KV27 1.14e-71 223 45 3 255 3 nudC NAD-capped RNA hydrolase NudC Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
A5F3M9 1.14e-71 223 45 3 255 3 nudC NAD-capped RNA hydrolase NudC Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395)
Q87KQ7 1.57e-71 223 44 3 250 3 nudC NAD-capped RNA hydrolase NudC Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
B7VM66 2.01e-71 223 44 2 250 3 nudC NAD-capped RNA hydrolase NudC Vibrio atlanticus (strain LGP32)
Q8DD17 2.64e-71 222 45 3 252 3 nudC NAD-capped RNA hydrolase NudC Vibrio vulnificus (strain CMCP6)
Q65W71 3.4e-70 219 46 5 250 3 nudC NAD-capped RNA hydrolase NudC Mannheimia succiniciproducens (strain KCTC 0769BP / MBEL55E)
A6VQT1 2.55e-66 209 42 4 254 3 nudC NAD-capped RNA hydrolase NudC Actinobacillus succinogenes (strain ATCC 55618 / DSM 22257 / CCUG 43843 / 130Z)
Q6LLW5 2.71e-65 207 41 3 256 3 nudC NAD-capped RNA hydrolase NudC Photobacterium profundum (strain SS9)
Q9RV62 8.47e-53 176 46 2 183 3 nudC NAD-capped RNA hydrolase NudC Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / CCUG 27074 / LMG 4051 / NBRC 15346 / NCIMB 9279 / VKM B-1422 / R1)
A4VLQ5 2.61e-49 166 40 4 239 3 nudC NAD-capped RNA hydrolase NudC Stutzerimonas stutzeri (strain A1501)
Q1IBF8 8.25e-48 162 41 3 213 3 nudC NAD-capped RNA hydrolase NudC Pseudomonas entomophila (strain L48)
Q3KC83 5.35e-47 160 40 3 212 3 nudC NAD-capped RNA hydrolase NudC Pseudomonas fluorescens (strain Pf0-1)
Q882A9 5.89e-47 160 36 5 258 3 nudC NAD-capped RNA hydrolase NudC Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000)
Q4KBL2 6.78e-47 160 42 3 213 3 nudC NAD-capped RNA hydrolase NudC Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5)
Q4ZTN0 3.11e-46 159 39 3 213 3 nudC NAD-capped RNA hydrolase NudC Pseudomonas syringae pv. syringae (strain B728a)
Q48IH8 3.86e-46 158 39 3 213 3 nudC NAD-capped RNA hydrolase NudC Pseudomonas savastanoi pv. phaseolicola (strain 1448A / Race 6)
Q7NTZ8 1.1e-43 151 36 5 254 3 nudC NAD-capped RNA hydrolase NudC Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / CCUG 213 / NBRC 12614 / NCIMB 9131 / NCTC 9757 / MK)
Q88FQ8 5.86e-43 150 41 3 213 3 nudC NAD-capped RNA hydrolase NudC Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440)
A5W1F2 1.44e-42 149 41 3 213 3 nudC NAD-capped RNA hydrolase NudC Pseudomonas putida (strain ATCC 700007 / DSM 6899 / JCM 31910 / BCRC 17059 / LMG 24140 / F1)
B1J6H6 1.73e-42 149 41 3 213 3 nudC NAD-capped RNA hydrolase NudC Pseudomonas putida (strain W619)
B0KMR5 2.77e-42 148 40 3 213 3 nudC NAD-capped RNA hydrolase NudC Pseudomonas putida (strain GB-1)
B7VB54 8.85e-38 137 37 5 240 3 nudC NAD-capped RNA hydrolase NudC Pseudomonas aeruginosa (strain LESB58)
Q02KW6 9.43e-38 136 37 5 240 3 nudC NAD-capped RNA hydrolase NudC Pseudomonas aeruginosa (strain UCBPP-PA14)
O86062 9.95e-38 136 37 5 240 3 nudC NAD-capped RNA hydrolase NudC Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
A6V6Z8 4.98e-36 132 37 5 238 3 nudC NAD-capped RNA hydrolase NudC Pseudomonas aeruginosa (strain PA7)
Q29RH3 2.38e-26 109 32 8 219 2 NUDT12 NAD-capped RNA hydrolase NUDT12 Bos taurus
Q5RD76 2.52e-26 109 32 8 219 2 NUDT12 NAD-capped RNA hydrolase NUDT12 Pongo abelii
Q9DCN1 4.19e-26 109 32 8 219 1 Nudt12 NAD-capped RNA hydrolase NUDT12 Mus musculus
Q4R7L8 1.18e-25 107 32 8 219 2 NUDT12 NAD-capped RNA hydrolase NUDT12 Macaca fascicularis
Q9BQG2 1.24e-25 107 32 8 219 1 NUDT12 NAD-capped RNA hydrolase NUDT12 Homo sapiens
Q94A82 9.88e-24 102 35 4 163 1 NUDT19 Nudix hydrolase 19, chloroplastic Arabidopsis thaliana
C1AGW8 1.43e-22 97 34 4 161 3 nudC NAD-capped RNA hydrolase NudC Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019)
A1KNJ7 1.43e-22 97 34 4 161 3 nudC NAD-capped RNA hydrolase NudC Mycobacterium bovis (strain BCG / Pasteur 1173P2)
Q7TX14 1.43e-22 97 34 4 161 3 nudC NAD-capped RNA hydrolase NudC Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
P9WIX5 2.7e-21 94 32 5 192 3 nudC NAD-capped RNA hydrolase NudC Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WIX4 2.7e-21 94 32 5 192 3 nudC NAD-capped RNA hydrolase NudC Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
A5U7L9 2.7e-21 94 32 5 192 3 nudC NAD-capped RNA hydrolase NudC Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra)
Q8JZU0 6.62e-21 93 38 4 143 1 Nudt13 NAD(P)H pyrophosphatase NUDT13, mitochondrial Mus musculus
Q9Y7J0 9.18e-20 90 33 7 185 3 SPBC1778.03c NAD-capped RNA hydrolase Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Q86X67 1.12e-19 90 33 4 157 1 NUDT13 NAD(P)H pyrophosphatase NUDT13, mitochondrial Homo sapiens
P53164 7.92e-19 88 29 7 230 1 NPY1 NAD-capped RNA hydrolase NPY1 Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Q19427 2.8e-15 77 29 5 165 1 ndx-9 NAD-capped RNA hydrolase ndx-9 Caenorhabditis elegans
P93740 1.9e-07 54 27 4 154 1 NUDT23 Nudix hydrolase 23, chloroplastic Arabidopsis thaliana
Q58549 2.81e-07 52 33 8 126 1 nudF ADP-ribose pyrophosphatase Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
Q9CA40 0.000847 42 25 3 119 1 NUDT1 Nudix hydrolase 1 Arabidopsis thaliana

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS13705
Feature type CDS
Gene nudC
Product NAD(+) diphosphatase
Location 3044807 - 3045592 (strand: -1)
Length 786 (nucleotides) / 261 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_2299
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF00293 NUDIX domain
PF09297 NADH pyrophosphatase zinc ribbon domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2816 Nucleotide transport and metabolism (F) F NADH pyrophosphatase NudC, Nudix superfamily

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03426 NAD+ diphosphatase [EC:3.6.1.22] Nicotinate and nicotinamide metabolism
Metabolic pathways
Peroxisome		 -

Protein Sequence

MHLYTLTGGEKGWWTVSLGGRVWLPKGELPFGLATDWGLVGKQAKIVGEWQGENVWLIYDKMESDMCSPRLIASQDEKLFKLVGRGVQLAEFYRSHRFCGYCGAKMRHSESEWACLCDNCHERYYPQIAPCIIVGIRNKDKILLAHHVRHKHSPLYTVLAGFVEVGESLEDAVAREVFEESHIHIRNIRYVSSQPWPFPHSLMMGFLADYAGGELRHDPSELISAAWYRYDELPQIPPSDTIARRLIEDTIANIRQDEENS

Flanking regions ( +/- flanking 50bp)

AAAGAGAGTATCCTCTATTGTATATCATTAACTAAGATAGAATTATTACTATGCATTTATATACGCTAACAGGTGGTGAAAAAGGCTGGTGGACAGTCAGCCTAGGCGGCCGAGTTTGGTTACCCAAAGGTGAACTTCCATTTGGTTTAGCAACAGATTGGGGACTTGTGGGTAAACAAGCCAAAATTGTTGGGGAATGGCAAGGAGAAAATGTCTGGCTGATTTATGACAAAATGGAAAGCGATATGTGTTCACCAAGGCTTATCGCATCTCAAGATGAAAAGTTATTTAAATTAGTCGGTCGTGGTGTTCAACTTGCTGAATTTTATCGTTCTCATCGGTTTTGTGGCTATTGTGGGGCTAAAATGCGCCATAGTGAGAGTGAATGGGCATGTTTATGTGATAACTGTCATGAGCGTTATTACCCACAAATAGCACCTTGTATTATTGTTGGTATTCGTAATAAAGATAAAATTCTATTAGCACACCATGTTAGGCATAAACATTCACCACTCTACACCGTTTTAGCTGGTTTTGTTGAAGTAGGGGAAAGCTTAGAAGATGCGGTAGCTCGCGAAGTTTTTGAAGAAAGTCATATTCATATTCGCAATATTCGTTATGTTTCTTCACAACCATGGCCTTTCCCTCATTCTCTTATGATGGGTTTTCTTGCCGATTATGCAGGGGGAGAGTTACGACATGATCCTTCGGAATTAATCAGTGCAGCATGGTATCGCTATGATGAGTTACCACAAATACCACCTTCTGATACTATTGCGCGACGTTTAATAGAAGATACGATAGCGAATATTAGACAAGATGAAGAAAATAGCTAAATAAAGGTGTTGCCTGCCAACTGTTATTTTTCCAACATGTTACACTACAC