Orthogroup:group_2299


Homologs in group_2299

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_17420 FBDBKF_17420 Morganella morganii S1 ahpC Alkyl hydroperoxide reductase subunit AhpC (peroxiredoxin)
EHELCC_17315 EHELCC_17315 Morganella morganii S2 ahpC Alkyl hydroperoxide reductase subunit AhpC (peroxiredoxin)
NLDBIP_17880 NLDBIP_17880 Morganella morganii S4 ahpC Alkyl hydroperoxide reductase subunit AhpC (peroxiredoxin)
LHKJJB_17800 LHKJJB_17800 Morganella morganii S3 ahpC Alkyl hydroperoxide reductase subunit AhpC (peroxiredoxin)
HKOGLL_17810 HKOGLL_17810 Morganella morganii S5 ahpC Alkyl hydroperoxide reductase subunit AhpC (peroxiredoxin)
F4V73_RS16595 F4V73_RS16595 Morganella psychrotolerans - peroxiredoxin C
PMI_RS00350 PMI_RS00350 Proteus mirabilis HI4320 - peroxiredoxin C

Distribution of group_2299 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2299 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2299

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2299.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 ahpC 5
2 - 2

Product

# Product Occurence
1 Alkyl hydroperoxide reductase subunit AhpC (peroxiredoxin) 5
2 peroxiredoxin C 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0450 7 V Defense mechanisms (V) Alkyl hydroperoxide reductase subunit AhpC (peroxiredoxin)

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03386 7 peroxiredoxin 2/4 [EC:1.11.1.24] Apoptosis - fly -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00578 7 AhpC/TSA family
PF10417 7 C-terminal domain of 1-Cys peroxiredoxin

Annotations of the 177 SwissProt hits

Annotation Number of occurrences
1-Cys peroxiredoxin 4
1-Cys peroxiredoxin A 2
1-Cys peroxiredoxin B 2
1-Cys peroxiredoxin PER1 4
2-Cys peroxiredoxin BAS1, chloroplastic 3
2-Cys peroxiredoxin BAS1, chloroplastic (Fragment) 2
2-Cys peroxiredoxin BAS1-like, chloroplastic 1
2-cysteine peroxiredoxin, chloroplastic 1
Alkyl hydroperoxide reductase C 30
Alkyl hydroperoxide reductase C (Fragment) 2
Alkyl hydroperoxide reductase E 3
Peroxiredoxin 27
Peroxiredoxin 1 6
Peroxiredoxin 2 7
Peroxiredoxin Bcp 3
Peroxiredoxin PRX1, mitochondrial 1
Peroxiredoxin Q, chloroplastic 6
Peroxiredoxin Q, chloroplastic (Fragment) 1
Peroxiredoxin TSA1 1
Peroxiredoxin TSA1-A 1
Peroxiredoxin TSA1-B 1
Peroxiredoxin TSA2 1
Peroxiredoxin bcp1 1
Peroxiredoxin prdx-2 1
Peroxiredoxin tpx1 1
Peroxiredoxin-1 8
Peroxiredoxin-2 7
Peroxiredoxin-2 (Fragment) 1
Peroxiredoxin-4 5
Peroxiredoxin-6 8
Probable 1-Cys peroxiredoxin 1
Probable 1-Cys peroxiredoxin (Fragment) 1
Probable peroxiredoxin prdx-3 1
Putative peroxiredoxin 1
Putative peroxiredoxin MT2597 1
Putative peroxiredoxin Q, chloroplastic 1
Putative peroxiredoxin Rv2521 1
Putative peroxiredoxin YkuU 1
Putative peroxiredoxin bcp 6
Putative peroxiredoxin in rubredoxin operon 1
Putative peroxiredoxin sll0755 1
Putative peroxiredoxin ycf42 3
Putative thioredoxin peroxidase 1
Selenocysteine-containing peroxiredoxin PrxU 1
Thiol-disulfide oxidoreductase ResA 6
Thioredoxin peroxidase 3
Thioredoxin-dependent peroxide reductase, mitochondrial 6

Protein length

Unique protein length 200

Protein length distribution