Orthogroup:group_2299


Homologs in group_2299

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_17675 FBDBKF_17675 Morganella morganii S1 nudC NAD(+) diphosphatase
EHELCC_18160 EHELCC_18160 Morganella morganii S2 nudC NAD(+) diphosphatase
NLDBIP_17990 NLDBIP_17990 Morganella morganii S4 nudC NAD(+) diphosphatase
LHKJJB_18185 LHKJJB_18185 Morganella morganii S3 nudC NAD(+) diphosphatase
HKOGLL_18015 HKOGLL_18015 Morganella morganii S5 nudC NAD(+) diphosphatase
F4V73_RS15055 F4V73_RS15055 Morganella psychrotolerans nudC NAD(+) diphosphatase
PMI_RS13705 PMI_RS13705 Proteus mirabilis HI4320 nudC NAD(+) diphosphatase

Distribution of group_2299 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2299 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2299

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2299.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 nudC 7

Product

# Product Occurence
1 NAD(+) diphosphatase 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG2816 7 F Nucleotide transport and metabolism (F) NADH pyrophosphatase NudC, Nudix superfamily

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03426 7 NAD+ diphosphatase [EC:3.6.1.22] Nicotinate and nicotinamide metabolism
Metabolic pathways
Peroxisome		 -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00293 7 NUDIX domain
PF09297 7 NADH pyrophosphatase zinc ribbon domain

Annotations of the 116 SwissProt hits

Annotation Number of occurrences
ADP-ribose pyrophosphatase 1
Geranyl diphosphate phosphohydrolase 1
NAD(P)H pyrophosphatase NUDT13, mitochondrial 2
NAD-capped RNA hydrolase 1
NAD-capped RNA hydrolase NPY1 1
NAD-capped RNA hydrolase NUDT12 5
NAD-capped RNA hydrolase NudC 99
NAD-capped RNA hydrolase ndx-9 1
Nudix hydrolase 1 1
Nudix hydrolase 19, chloroplastic 1
Nudix hydrolase 23, chloroplastic 1
Oxidized purine nucleoside triphosphate hydrolase 2

Protein length

Min length 260
Max length 261
Mean length (sd) 260.1 (0.4)
Median length 260.0

Protein length distribution