Homologs in group_2836

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_10510 FBDBKF_10510 72.5 Morganella morganii S1 fimD Outer membrane usher protein FimD/PapC
EHELCC_14845 EHELCC_14845 72.5 Morganella morganii S2 fimD Outer membrane usher protein FimD/PapC
NLDBIP_14675 NLDBIP_14675 72.5 Morganella morganii S4 fimD Outer membrane usher protein FimD/PapC
LHKJJB_14670 LHKJJB_14670 72.5 Morganella morganii S3 fimD Outer membrane usher protein FimD/PapC
HKOGLL_13290 HKOGLL_13290 72.5 Morganella morganii S5 fimD Outer membrane usher protein FimD/PapC

Distribution of the homologs in the orthogroup group_2836

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2836

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P43662 1.13e-134 424 29 20 852 3 lpfC Outer membrane usher protein LpfC Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P75857 3.82e-117 379 30 16 819 2 elfC Probable outer membrane usher protein ElfC Escherichia coli (strain K12)
P46009 1.59e-116 377 29 20 822 3 focD Outer membrane usher protein FocD Escherichia coli
P26949 6.04e-116 375 31 19 806 1 caf1A F1 capsule-anchoring protein Yersinia pestis
Q8XDD1 1.78e-115 374 30 17 822 2 elfC Probable outer membrane usher protein ElfC Escherichia coli O157:H7
P42915 4.5e-114 370 29 15 844 2 yraJ Outer membrane usher protein YraJ Escherichia coli (strain K12)
P30130 2.77e-109 358 28 22 874 1 fimD Outer membrane usher protein FimD Escherichia coli (strain K12)
P37924 4.09e-103 342 27 20 860 3 fimD Outer membrane usher protein FimD Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P77468 3.32e-101 336 27 22 824 2 sfmD Outer membrane usher protein SfmD Escherichia coli (strain K12)
Q56983 1.83e-99 331 27 18 816 3 psaC Outer membrane usher protein PsaC Yersinia pseudotuberculosis serotype I (strain IP32953)
P31527 1.83e-99 331 27 18 816 3 psaC Outer membrane usher protein PsaC Yersinia pestis
P33408 6.6e-99 330 27 19 808 3 myfC Outer membrane usher protein MyfC Yersinia enterocolitica
P53517 1.03e-98 330 26 17 817 3 afaC Outer membrane usher protein AfaC Escherichia coli
P46005 1.59e-89 304 26 15 812 3 aggC Outer membrane usher protein AggC Escherichia coli
P46000 2.59e-81 282 28 27 843 3 fasD Outer membrane usher protein FasD Escherichia coli
P33388 1.6e-78 274 28 12 727 3 sefC Outer membrane usher protein SefC Salmonella enteritidis
P33129 8.98e-76 267 25 24 811 1 htrE Outer membrane usher protein HtrE Escherichia coli (strain K12)
P33341 6.06e-75 264 26 22 766 2 yehB Outer membrane usher protein YehB Escherichia coli (strain K12)
P33397 1.41e-71 255 26 23 796 3 hifC Outer membrane usher protein HifC Haemophilus influenzae
P21647 3.06e-71 254 24 17 778 3 mrkC Outer membrane usher protein MrkC Klebsiella pneumoniae
P45998 2.06e-69 249 25 24 799 3 hifC Outer membrane usher protein HifC Haemophilus influenzae
P45997 1.11e-68 247 26 23 796 3 hifC Outer membrane usher protein HifC Haemophilus influenzae
P76655 1.68e-68 246 26 20 787 5 yqiG Putative outer membrane usher protein YqiG Escherichia coli (strain K12)
P15484 2.82e-67 244 27 18 746 3 None Outer membrane usher protein CS3-2 Escherichia coli
P33410 9.12e-66 239 25 18 734 3 fimC Outer membrane usher protein FimC Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251)
P07110 2.78e-65 237 26 19 785 1 papC Outer membrane usher protein PapC Escherichia coli
P77196 4.13e-64 234 25 25 871 5 yfcU Putative outer membrane usher protein YfcU Escherichia coli (strain K12)
Q8X5K8 4.35e-64 226 29 11 496 2 lpfC' Probable outer membrane usher protein LpfC' Escherichia coli O157:H7
P53512 1.59e-59 220 28 20 761 3 cssD Outer membrane usher protein CssD Escherichia coli
P75750 1.86e-59 220 26 25 801 3 ybgQ Uncharacterized outer membrane usher protein YbgQ Escherichia coli (strain K12)
P53513 1.4e-58 218 27 22 761 3 cssD Outer membrane usher protein CssD Escherichia coli
P53514 5.03e-58 216 25 27 815 3 pmfC Outer membrane usher protein PmfC Proteus mirabilis (strain HI4320)
Q8X5K7 6.39e-54 194 30 10 360 2 lpfC Probable outer membrane usher protein LpfC Escherichia coli O157:H7
P12050 1.65e-50 194 27 26 737 3 fanD Outer membrane usher protein FanD Escherichia coli
P06970 1.15e-47 186 25 25 827 3 faeD Outer membrane usher protein FaeD Escherichia coli
P37868 2.33e-42 169 23 23 734 3 pefC Outer membrane usher protein PefC Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P45420 1.46e-26 120 23 27 673 3 yhcD Uncharacterized outer membrane usher protein YhcD Escherichia coli (strain K12)
Q7DBJ9 2.53e-19 94 29 4 223 4 ydeT Fimbrial usher domain-containing protein YdeT Escherichia coli O157:H7
P76137 2.18e-18 91 28 4 209 4 ydeT Fimbrial usher domain-containing protein YdeT Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS14220
Feature type CDS
Gene -
Product fimbria/pilus outer membrane usher protein
Location 60674 - 63187 (strand: -1)
Length 2514 (nucleotides) / 837 (amino acids)

Contig

Accession term accessions NZ_VXKB01000004 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 258164 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2836
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF00577 Outer membrane usher protein
PF13953 PapC C-terminal domain
PF13954 PapC N-terminal domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3188 Cell motility (N)
Extracellular structures (W)		 NW Outer membrane usher protein FimD/PapC

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K07347 outer membrane usher protein Two-component system
Pertussis		 -

Protein Sequence

MKNTYNKNNFILLPVISFLLAGTSCSVIAGDYYPPGLFSIAGAESQLTNEELDVFKENDVAPGKYKVNLFINNSKISNQDIDFILMKNSSGSEKLAPCFSKADWDNFGIEFPVLPDETQNTDNCLNINNIEFVQGYLDLNTKVYSLTVPQSYINKDKLSLIEEKNWDNGIPVLFVDYLFSAFNRQHNGNSDDNYYGNIRTRVNMGAWRYKNYSTWMNDTNGKKKWNNISNTLSRNINKIKSEFTIGDLYSSSQLFDSVKYRGVRLTTDRTMEPTNKTNYVPTISGLANSEATVTIVQNGETILRQSVPAGPFNLTNYFPMSNGGNLYVNVTETDGSEKNFIVPFSSISTLERKGNIRYSLSSGKYDSRNDGDGKYINQAEVFYGFTDFITLYGGAFVAPRYQSGGIGAAFNLGVFGAITTDILHAKTTMTDDKKFSGNAFRVNYSKRLEATNTSLSLVGYRHFDTNFYRFDDAMAYQDNNNSHNKLKNEYTLSLNQPILSGNSSLNISSVIYEYTNGKKQKSYNAGFNSSFNKINYGIYYNYYQGGKSHDNNKNTYNISMNLSVPLSINDYPVWANYSASVDNDRQSLQTAGISGNYGDKQQGSWDIYQSHGNKGVDYSGGLSSSYRSQYSTVHAGYSYSKDNKNLSYGMNGSLVATQYGVLATPALQETNALVLTKDAAGIGVVNGHSLKTNNSGLAIVSGMTPYRKNNITIDTQTLPGNVEIENNIINNIVPTKGALILANFDAKKGYKLLIKLTSKDNTEIPLGAKASMEGSPDYLVSNFSSLYFVANKEKGDIFVEWKYNGVTQHCRVNYNINNTIPTNGLYIMTSDCQQEVL

Flanking regions ( +/- flanking 50bp)

GCAAAGCAATTGAGAAAAACGTCTCTGTTAAATAAATCATGATGACTACTATGAAAAATACGTATAATAAAAACAACTTCATATTATTACCTGTAATATCATTTCTGCTTGCAGGGACATCCTGTTCAGTTATTGCCGGAGACTATTACCCACCTGGTTTATTCAGTATTGCCGGTGCTGAATCTCAGTTAACTAATGAAGAACTTGATGTTTTCAAAGAAAATGATGTAGCTCCGGGAAAATATAAAGTTAATCTATTTATTAACAATAGTAAAATATCTAATCAGGATATTGATTTCATTCTGATGAAAAACAGTTCCGGAAGTGAAAAGCTGGCGCCTTGCTTTTCAAAAGCAGACTGGGATAATTTTGGTATTGAGTTTCCTGTATTACCTGATGAAACTCAAAATACAGATAACTGCCTTAACATTAATAACATTGAATTTGTACAAGGCTATTTGGATCTCAATACTAAAGTTTATTCCCTGACAGTCCCTCAATCCTATATTAATAAAGACAAACTATCACTGATTGAAGAAAAAAACTGGGATAATGGTATTCCTGTATTATTTGTTGATTACTTATTTTCTGCGTTCAACCGTCAACATAATGGCAACTCTGATGATAACTATTACGGTAACATCCGGACCCGTGTAAATATGGGAGCATGGCGCTACAAGAATTACTCAACCTGGATGAATGATACCAATGGAAAGAAGAAATGGAACAATATCAGCAATACCCTTTCACGAAATATTAATAAAATTAAAAGTGAATTTACTATCGGGGATTTATACTCCTCATCACAGTTGTTTGACTCCGTTAAATACCGCGGTGTTCGTCTGACAACAGACAGAACAATGGAACCAACAAATAAAACAAATTATGTTCCTACTATTTCCGGCTTAGCTAACTCAGAAGCTACGGTCACTATTGTTCAAAATGGTGAAACAATCCTCAGACAAAGTGTGCCCGCAGGACCCTTTAATCTGACCAACTACTTCCCGATGAGCAATGGCGGGAATCTCTACGTTAATGTTACAGAAACAGACGGTAGTGAAAAGAATTTCATCGTGCCTTTTTCGTCAATCTCAACCCTGGAAAGGAAAGGAAATATACGCTACAGCCTGTCCAGCGGAAAATATGACAGCCGCAATGATGGTGATGGGAAATACATCAATCAGGCAGAGGTTTTTTATGGTTTTACCGATTTTATTACACTTTACGGTGGTGCATTTGTTGCCCCGCGTTACCAATCCGGCGGGATAGGAGCAGCATTTAATTTAGGTGTTTTTGGTGCTATAACGACCGATATATTACATGCAAAAACAACCATGACGGATGATAAAAAATTCAGTGGTAATGCATTCCGTGTTAACTACTCAAAACGTCTCGAGGCAACGAATACCAGCCTATCATTGGTTGGCTACCGGCATTTTGATACTAATTTCTATCGTTTTGATGATGCAATGGCATATCAGGATAATAACAACAGCCATAATAAACTAAAGAATGAATATACACTATCACTGAACCAACCAATATTATCCGGAAATTCATCGTTAAATATTTCCTCTGTCATCTATGAATATACAAACGGGAAAAAACAAAAATCGTACAATGCCGGATTTAACAGCTCATTTAATAAAATAAACTATGGTATTTATTATAACTATTATCAGGGTGGGAAATCTCACGATAATAATAAAAATACCTATAACATCAGTATGAACCTCAGCGTTCCGTTAAGTATTAATGATTACCCTGTCTGGGCAAATTACAGCGCATCTGTCGATAATGATCGACAGTCATTACAAACGGCCGGGATAAGCGGTAATTATGGTGATAAACAGCAAGGCAGCTGGGATATTTATCAAAGTCATGGCAATAAGGGTGTCGATTACTCAGGCGGATTAAGCAGTTCATATCGTTCACAATATTCAACTGTTCATGCCGGTTATTCATACAGTAAAGATAATAAAAATCTCAGTTATGGCATGAACGGCTCACTGGTTGCCACACAGTATGGTGTTCTGGCAACACCTGCATTGCAGGAAACTAATGCACTGGTACTGACAAAAGATGCCGCAGGTATCGGTGTGGTTAATGGCCATTCACTGAAAACAAATAACTCAGGTCTGGCAATTGTCTCCGGTATGACGCCTTACCGGAAAAATAATATTACGATAGATACGCAGACACTACCGGGTAATGTTGAGATTGAAAATAATATTATTAATAATATTGTCCCGACAAAAGGCGCATTAATTCTTGCAAACTTTGATGCAAAGAAGGGATATAAATTATTAATAAAACTTACATCGAAAGACAATACTGAAATACCACTGGGCGCAAAAGCCAGCATGGAAGGATCACCTGACTATCTTGTATCTAATTTCAGCTCACTTTACTTTGTTGCCAATAAAGAAAAAGGCGATATTTTTGTTGAGTGGAAATATAACGGTGTCACACAGCACTGCCGGGTGAATTACAATATTAACAATACTATTCCGACAAATGGTCTTTATATTATGACCTCGGATTGTCAGCAGGAGGTATTATGAGCCACTATCATATAATGAAAAAAACCAAACATCTGGCACTGACCTTACTG