Homologs in group_2730

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_07480 FBDBKF_07480 95.4 Morganella morganii S1 mal methylaspartate ammonia-lyase
EHELCC_17150 EHELCC_17150 95.4 Morganella morganii S2 mal methylaspartate ammonia-lyase
NLDBIP_13755 NLDBIP_13755 95.4 Morganella morganii S4 mal methylaspartate ammonia-lyase
LHKJJB_09095 LHKJJB_09095 95.4 Morganella morganii S3 mal methylaspartate ammonia-lyase
HKOGLL_08645 HKOGLL_08645 95.4 Morganella morganii S5 mal methylaspartate ammonia-lyase

Distribution of the homologs in the orthogroup group_2730

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2730

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
O66145 0.0 684 76 0 412 1 None Methylaspartate ammonia-lyase Citrobacter amalonaticus
Q3AEJ6 3.98e-172 490 57 2 414 3 CHY_0582 Methylaspartate ammonia-lyase 2 Carboxydothermus hydrogenoformans (strain ATCC BAA-161 / DSM 6008 / Z-2901)
Q05514 9.59e-168 479 57 0 409 1 None Methylaspartate ammonia-lyase Clostridium tetanomorphum
Q3AEU2 3.02e-161 463 55 3 411 1 CHY_0484 Methylaspartate ammonia-lyase 1 Carboxydothermus hydrogenoformans (strain ATCC BAA-161 / DSM 6008 / Z-2901)
Q5V465 1.9e-137 402 50 4 412 3 mal Methylaspartate ammonia-lyase Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS13635
Feature type CDS
Gene -
Product methylaspartate ammonia-lyase
Location 361962 - 363203 (strand: -1)
Length 1242 (nucleotides) / 413 (amino acids)

Contig

Accession term accessions NZ_VXKB01000003 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 425895 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2730
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF05034 Methylaspartate ammonia-lyase N-terminus
PF07476 Methylaspartate ammonia-lyase C-terminus

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3799 Amino acid transport and metabolism (E) E Methylaspartate ammonia-lyase

Kegg Ortholog Annotation(s)

Protein Sequence

MKIKHALFTAGNSSFYFDDQQAIKDGAGHDGFVYTGKPVTPGFTAIRQAGECVSVQLVLENGSVAIGDCAAVQYSGAGGRDPLFLAENFIPFLEKHIKPLLEGRDISEFRANAKFFDELKVEGKQLHTAIRYGLSQALLDAAALATNRVKAEVVCDEWHLPVVAEPIPLFGQSGDDRYNAVDKMILKHVDVLPHGLINNVDEKLGRQGEKLRAYVSWLAERIVELRTEDSYKPSLHIDVYGTIGIIFDKDPIRCADYIASLQEQAGDLELYIEGPIDAGNKPDQIRLMKGIMDHLKKLGSKVKIVADEWCNTCQDIIDFTDAKCCDMVQIKTPDLGSVHNIADAVLYCQKNGMEAYQGGTCNETDVSARTCVHIAIATRPMRMLIKPGMGFDEGMNIVNNEMNRTLAVLKAKG

Flanking regions ( +/- flanking 50bp)

ATTGATGACATTAACGCAGTATCTCACAGTAAATTGGTAGGAAGACCATAATGAAAATTAAACATGCATTGTTCACGGCGGGTAACTCATCTTTCTATTTTGATGATCAGCAGGCAATTAAAGACGGCGCAGGTCACGATGGTTTCGTTTATACCGGTAAGCCGGTAACGCCGGGCTTTACTGCAATTCGTCAGGCAGGTGAGTGCGTATCAGTTCAGTTAGTCCTCGAAAATGGTTCTGTGGCTATCGGTGACTGCGCCGCTGTTCAGTATTCCGGTGCGGGTGGTCGTGACCCGTTATTCCTGGCGGAAAACTTTATTCCGTTCCTGGAAAAACATATCAAACCACTGCTGGAAGGTCGTGATATCAGTGAATTCCGCGCTAACGCCAAGTTCTTCGATGAACTGAAAGTGGAAGGCAAACAACTGCACACGGCTATTCGTTATGGTCTGTCCCAGGCACTGCTGGACGCTGCGGCATTAGCAACTAACCGTGTGAAAGCGGAAGTTGTCTGCGACGAATGGCATCTGCCGGTTGTCGCTGAGCCGATTCCTCTGTTTGGTCAGAGCGGTGATGACCGTTATAACGCCGTTGACAAAATGATCCTCAAACACGTTGATGTGCTGCCACATGGCCTTATCAACAACGTAGATGAAAAACTGGGTCGTCAGGGTGAGAAACTGCGTGCATACGTTTCATGGCTGGCAGAGCGTATCGTTGAATTACGCACAGAAGACAGCTACAAACCTTCTCTGCACATCGACGTTTACGGCACTATCGGTATCATTTTCGACAAAGATCCAATCCGTTGCGCGGATTATATCGCAAGTCTGCAGGAGCAGGCCGGTGATTTGGAACTGTACATCGAAGGTCCGATTGATGCAGGTAACAAACCAGACCAGATCCGCCTGATGAAAGGCATTATGGATCACCTGAAAAAACTCGGTTCAAAAGTCAAAATTGTTGCTGACGAATGGTGTAACACCTGCCAGGACATCATTGATTTCACAGATGCAAAATGCTGTGACATGGTTCAGATTAAAACCCCTGACCTGGGTTCAGTTCATAATATCGCTGACGCAGTGCTGTATTGCCAGAAGAACGGTATGGAAGCATACCAGGGCGGTACCTGTAACGAAACCGACGTCAGTGCGCGTACCTGTGTTCACATCGCTATCGCAACACGTCCGATGCGTATGCTGATCAAGCCGGGTATGGGCTTCGACGAAGGTATGAATATCGTTAACAACGAAATGAACCGCACACTGGCTGTACTGAAAGCAAAAGGGTAAGGAAACATTATGTCTGAGACATTTAAAATTCTGTCTCCCACTGCCATTCT