Homologs in group_2733

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_07525 FBDBKF_07525 84.7 Morganella morganii S1 mngR DNA-binding transcriptional regulator, GntR family
EHELCC_17195 EHELCC_17195 84.7 Morganella morganii S2 mngR DNA-binding transcriptional regulator, GntR family
NLDBIP_13800 NLDBIP_13800 84.7 Morganella morganii S4 mngR DNA-binding transcriptional regulator, GntR family
LHKJJB_09050 LHKJJB_09050 84.7 Morganella morganii S3 mngR DNA-binding transcriptional regulator, GntR family
HKOGLL_08600 HKOGLL_08600 84.7 Morganella morganii S5 mngR DNA-binding transcriptional regulator, GntR family

Distribution of the homologs in the orthogroup group_2733

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2733

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0ACN1 8.7e-93 275 52 0 236 4 yihL Uncharacterized HTH-type transcriptional regulator YihL Shigella flexneri
P0ACM9 8.7e-93 275 52 0 236 4 yihL Uncharacterized HTH-type transcriptional regulator YihL Escherichia coli (strain K12)
P0ACN0 8.7e-93 275 52 0 236 4 yihL Uncharacterized HTH-type transcriptional regulator YihL Escherichia coli O157:H7
Q7CR30 6.03e-37 132 30 1 226 2 phnR Putative transcriptional regulator of 2-aminoethylphosphonate degradation operons Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P96061 6.03e-37 132 30 1 226 4 phnR Putative transcriptional regulator of 2-aminoethylphosphonate degradation operons Salmonella typhi
Q57SD4 6.43e-37 132 30 1 226 4 phnR Putative transcriptional regulator of 2-aminoethylphosphonate degradation operons Salmonella choleraesuis (strain SC-B67)
Q5PFQ9 1.18e-36 132 30 1 226 4 phnR Putative transcriptional regulator of 2-aminoethylphosphonate degradation operons Salmonella paratyphi A (strain ATCC 9150 / SARB42)
P0ACM8 7.38e-11 63 23 6 216 4 yegW Uncharacterized HTH-type transcriptional regulator YegW Shigella flexneri
P0ACM5 7.38e-11 63 23 6 216 4 yegW Uncharacterized HTH-type transcriptional regulator YegW Escherichia coli (strain K12)
P0ACM6 7.38e-11 63 23 6 216 4 yegW Uncharacterized HTH-type transcriptional regulator YegW Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0ACM7 7.38e-11 63 23 6 216 4 yegW Uncharacterized HTH-type transcriptional regulator YegW Escherichia coli O157:H7
O34817 8.78e-10 60 29 1 117 1 nagR HTH-type transcriptional repressor NagR Bacillus subtilis (strain 168)
Q8X835 8.96e-09 57 19 2 226 3 frlR Probable fructoselysine utilization operon transcriptional repressor Escherichia coli O157:H7
O31459 9.27e-09 57 24 3 220 1 gamR HTH-type transcriptional repressor GamR Bacillus subtilis (strain 168)
A0QQ72 9.68e-09 57 28 9 227 1 phnF HTH-type transcriptional repressor PhnF Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155)
Q83PX4 1.23e-08 57 19 2 226 3 frlR Probable fructoselysine utilization operon transcriptional repressor Shigella flexneri
P45544 1.54e-08 57 19 2 226 1 frlR Probable fructoselysine utilization operon transcriptional repressor Escherichia coli (strain K12)
P0ACL9 2.94e-08 56 39 0 63 1 pdhR Pyruvate dehydrogenase complex repressor Escherichia coli (strain K12)
P0ACM0 2.94e-08 56 39 0 63 3 pdhR Pyruvate dehydrogenase complex repressor Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0ACM1 2.94e-08 56 39 0 63 3 pdhR Pyruvate dehydrogenase complex repressor Escherichia coli O157:H7
P0CL10 3.26e-08 56 39 0 63 3 pdhR Pyruvate dehydrogenase complex repressor Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
E1W823 3.26e-08 56 39 0 63 3 pdhR Pyruvate dehydrogenase complex repressor Salmonella typhimurium (strain SL1344)
P0A2S3 3.26e-08 56 39 0 63 3 pdhR Pyruvate dehydrogenase complex repressor Salmonella typhi
O86331 3.09e-07 53 22 4 215 1 Rv0792c HTH-type transcriptional regulator Rv0792c Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P16684 5.43e-07 52 24 4 213 1 phnF Probable transcriptional regulator PhnF Escherichia coli (strain K12)
P42239 1.29e-06 51 43 0 67 4 ycbG Uncharacterized HTH-type transcriptional regulator YcbG Bacillus subtilis (strain 168)
Q9K492 4.47e-06 50 22 3 213 1 dasR HTH-type transcriptional repressor DasR Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
P67740 6.07e-06 49 44 0 61 4 BQ2027_MB0505 Uncharacterized HTH-type transcriptional regulator Mb0505 Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
P9WMG7 6.07e-06 49 44 0 61 1 Rv0494 Uncharacterized HTH-type transcriptional regulator Rv0494 Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WMG6 6.07e-06 49 44 0 61 4 MT0514 Uncharacterized HTH-type transcriptional regulator MT0514 Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
Q45591 7.2e-06 49 19 2 197 1 yydK Uncharacterized HTH-type transcriptional regulator YydK Bacillus subtilis (strain 168)
O31761 1.09e-05 48 20 4 224 4 ymfC Uncharacterized HTH-type transcriptional regulator YmfC Bacillus subtilis (strain 168)
P31453 1.2e-05 48 21 3 195 4 yidP Uncharacterized HTH-type transcriptional regulator YidP Escherichia coli (strain K12)
Q82IW0 1.38e-05 48 22 3 226 3 dasR HTH-type transcriptional repressor DasR Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NBRC 14893 / NCIMB 12804 / NRRL 8165 / MA-4680)
P0ACL8 8.59e-05 46 38 0 62 3 lldR Putative L-lactate dehydrogenase operon regulatory protein Shigella flexneri
P0ACL7 8.59e-05 46 38 0 62 2 lldR Putative L-lactate dehydrogenase operon regulatory protein Escherichia coli (strain K12)
Q8VV01 0.000111 45 21 3 226 2 dasR HTH-type transcriptional repressor DasR Streptomyces griseus
P13669 0.000176 45 21 3 197 1 mngR Mannosyl-D-glycerate transport/metabolism system repressor MngR Escherichia coli (strain K12)
Q9X9E0 0.000237 44 38 2 63 4 exuR Exu regulon transcriptional regulator Dickeya chrysanthemi
P0ACL4 0.000603 43 39 2 63 3 exuR Exu regulon transcriptional regulator Shigella flexneri
P0ACL2 0.000603 43 39 2 63 4 exuR Exu regulon transcriptional regulator Escherichia coli (strain K12)
P0ACL3 0.000603 43 39 2 63 3 exuR Exu regulon transcriptional regulator Escherichia coli O157:H7
P44487 0.000668 43 33 0 53 3 uxuR Uxu operon regulator Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P77730 0.000835 43 32 2 83 3 ydcR Uncharacterized HTH-type transcriptional regulator YdcR Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS13590
Feature type CDS
Gene -
Product UTRA domain-containing protein
Location 350976 - 351686 (strand: 1)
Length 711 (nucleotides) / 236 (amino acids)

Contig

Accession term accessions NZ_VXKB01000003 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 425895 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2733
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF00392 Bacterial regulatory proteins, gntR family
PF07702 UTRA domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2188 Transcription (K) K DNA-binding transcriptional regulator, GntR family

Protein Sequence

MKNTQTAADLAREKLEILLTDGVITPGDKLPAERPLTEQLGVNRMSLRQALLSMESDGKIFRKNRSGWFAALPRFNYNPKSPASFNQAARAQGREPSWEYSDKSLITNPPAEIAEKLGLAPGEPVYCICGWGALDGHKVFWHQTYINPAVGPGFTDKLDNHSFAAIWEEEYHITTTTARLAFKPARMPEAASKEIGCTANSPGIRVEKYRCDSAHNIVQIDIEYWRFESVNFFVEL

Flanking regions ( +/- flanking 50bp)

GACTCACGTAACTTACAATGAATTTGGTTTAAACCAAAAAAATAAATAATATGAAAAACACACAAACAGCAGCTGACCTTGCCAGAGAAAAATTAGAAATACTGCTCACTGACGGTGTAATTACACCCGGCGATAAATTACCTGCTGAGCGCCCGCTGACGGAACAACTCGGTGTTAACCGGATGTCACTGCGCCAGGCATTGCTGAGCATGGAAAGTGACGGGAAAATTTTCCGCAAAAACCGCAGTGGCTGGTTTGCCGCGCTTCCGCGATTTAATTACAACCCGAAATCACCCGCCAGTTTTAATCAGGCGGCGAGAGCACAGGGGCGGGAGCCATCATGGGAATACAGCGATAAATCACTGATAACCAACCCGCCTGCGGAAATAGCTGAAAAACTGGGGCTTGCGCCGGGAGAGCCGGTTTATTGCATCTGTGGCTGGGGCGCGCTCGACGGGCACAAAGTATTCTGGCACCAGACGTATATCAACCCGGCAGTCGGTCCCGGATTTACCGACAAACTGGATAATCACTCTTTTGCCGCTATCTGGGAAGAGGAATACCACATCACCACCACCACGGCACGCCTGGCATTTAAACCTGCCCGTATGCCTGAAGCGGCCAGTAAAGAAATCGGCTGCACCGCCAATTCGCCGGGGATCCGGGTCGAAAAATACCGCTGCGATTCTGCACATAATATTGTTCAGATAGATATCGAATACTGGCGCTTTGAATCTGTTAATTTTTTTGTTGAGCTTTGAGATAAGGAAATATACCCATGACATCAGATGAAGCCCGCCGGATTATTGAA