Homologs in group_2765

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_07765 FBDBKF_07765 95.2 Morganella morganii S1 dpaL diaminopropionate ammonia-lyase
EHELCC_13595 EHELCC_13595 95.2 Morganella morganii S2 dpaL diaminopropionate ammonia-lyase
NLDBIP_14040 NLDBIP_14040 95.2 Morganella morganii S4 dpaL diaminopropionate ammonia-lyase
LHKJJB_08810 LHKJJB_08810 95.2 Morganella morganii S3 dpaL diaminopropionate ammonia-lyase
HKOGLL_08360 HKOGLL_08360 95.2 Morganella morganii S5 dpaL diaminopropionate ammonia-lyase

Distribution of the homologs in the orthogroup group_2765

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2765

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P66899 0.0 647 76 1 395 1 ygeX Diaminopropionate ammonia-lyase Escherichia coli (strain K12)
P66900 0.0 647 76 1 395 3 ygeX Diaminopropionate ammonia-lyase Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P66901 0.0 647 76 1 395 3 ygeX Diaminopropionate ammonia-lyase Escherichia coli O157:H7
P40817 4.85e-124 367 47 4 400 1 dpaL Diaminopropionate ammonia-lyase Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
B3PYT5 6.04e-12 70 28 8 256 3 dsdA Probable D-serine dehydratase Rhizobium etli (strain CIAT 652)
B5ZNC1 1.57e-11 69 25 10 340 3 dsdA Probable D-serine dehydratase Rhizobium leguminosarum bv. trifolii (strain WSM2304)
P20506 1.16e-09 63 27 5 176 3 ilvA L-Threonine dehydratase biosynthetic IlvA Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q9CKJ2 2.75e-09 62 25 15 357 3 ilvA L-threonine dehydratase biosynthetic IlvA Pasteurella multocida (strain Pm70)
P04968 7.11e-09 61 27 6 176 1 ilvA L-threonine dehydratase biosynthetic IlvA Escherichia coli (strain K12)
Q8NWQ4 1.19e-08 59 32 5 144 3 tdcB L-threonine dehydratase catabolic TdcB Staphylococcus aureus (strain MW2)
Q6G9C4 1.19e-08 59 32 5 144 3 tdcB L-threonine dehydratase catabolic TdcB Staphylococcus aureus (strain MSSA476)
Q6GGX0 1.19e-08 59 32 5 144 3 tdcB L-threonine dehydratase catabolic TdcB Staphylococcus aureus (strain MRSA252)
Q5HFY5 1.19e-08 59 32 5 144 3 tdcB L-threonine dehydratase catabolic TdcB Staphylococcus aureus (strain COL)
Q2FYJ3 1.19e-08 59 32 5 144 3 tdcB L-threonine dehydratase catabolic TdcB Staphylococcus aureus (strain NCTC 8325 / PS 47)
Q2FH01 1.19e-08 59 32 5 144 3 tdcB L-threonine dehydratase catabolic TdcB Staphylococcus aureus (strain USA300)
P46493 1.58e-08 60 24 12 313 3 ilvA L-threonine dehydratase biosynthetic IlvA Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
A6UB95 3.4e-08 58 23 9 292 3 dsdA Probable D-serine dehydratase Sinorhizobium medicae (strain WSM419)
Q2YY67 4.12e-08 58 31 5 144 3 tdcB L-threonine dehydratase catabolic TdcB Staphylococcus aureus (strain bovine RF122 / ET3-1)
Q8CNK9 1.34e-07 57 20 12 335 3 ilvA L-threonine dehydratase biosynthetic IlvA Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200)
Q5HMF5 1.34e-07 57 20 12 335 3 ilvA L-threonine dehydratase biosynthetic IlvA Staphylococcus epidermidis (strain ATCC 35984 / DSM 28319 / BCRC 17069 / CCUG 31568 / BM 3577 / RP62A)
Q04G28 1.43e-07 57 25 13 302 3 dsdA Probable D-serine dehydratase Oenococcus oeni (strain ATCC BAA-331 / PSU-1)
Q86B06 3.1e-07 55 22 8 304 3 sds L-serine dehydratase Dictyostelium discoideum
Q7A5L8 1.18e-06 53 31 5 145 1 tdcB L-threonine dehydratase catabolic TdcB Staphylococcus aureus (strain N315)
Q99U50 1.18e-06 53 31 5 145 3 tdcB L-threonine dehydratase catabolic TdcB Staphylococcus aureus (strain Mu50 / ATCC 700699)
Q04513 1.96e-06 53 26 5 180 3 ilvA L-threonine dehydratase biosynthetic IlvA Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / BCRC 11384 / CCUG 27702 / LMG 3730 / NBRC 12168 / NCIMB 10025 / NRRL B-2784 / 534)
P25306 3.67e-06 52 23 6 201 1 TD2 Threonine dehydratase 2 biosynthetic, chloroplastic Solanum lycopersicum
Q9AXU4 1.56e-05 50 25 11 241 1 TD Threonine dehydratase Nicotiana attenuata
Q74FW6 2.27e-05 50 32 0 71 1 tdcB L-threonine ammonia-lyase Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA)
P0CF23 4.9e-05 48 22 10 287 3 SDL1 L-serine dehydratase Saccharomyces cerevisiae
O59701 4.91e-05 48 33 1 86 1 cys11 Cysteine synthase 1 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
C8ZAU6 6.29e-05 48 22 10 287 3 SDL1 L-serine dehydratase Saccharomyces cerevisiae (strain Lalvin EC1118 / Prise de mousse)
B3LU13 6.29e-05 48 22 10 287 3 SDL1 L-serine dehydratase Saccharomyces cerevisiae (strain RM11-1a)
Q4L7U4 0.00012 47 29 3 106 3 ilvA L-threonine dehydratase biosynthetic IlvA Staphylococcus haemolyticus (strain JCSC1435)
Q9KC12 0.00016 47 24 10 278 3 dsdA Probable D-serine dehydratase Halalkalibacterium halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
B5VKE8 0.000202 46 21 9 280 3 SDL1 L-serine dehydratase Saccharomyces cerevisiae (strain AWRI1631)
A0FKE6 0.000203 47 28 7 181 1 TD1 Threonine dehydratase 1 biosynthetic, chloroplastic Solanum lycopersicum
Q10725 0.000223 46 27 6 213 1 psdht Phenylserine dehydratase Ralstonia pickettii
A6ZVB1 0.000245 46 21 10 287 3 SDL1 L-serine dehydratase Saccharomyces cerevisiae (strain YJM789)
P9WG95 0.000315 46 25 7 179 1 ilvA L-threonine dehydratase biosynthetic IlvA Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WG94 0.000315 46 25 7 179 3 ilvA L-threonine dehydratase biosynthetic IlvA Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P66898 0.000315 46 25 7 179 3 ilvA L-threonine dehydratase biosynthetic IlvA Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
A4F2N8 0.000334 45 22 10 321 1 thadh L-threo-3-hydroxyaspartate ammonia-lyase Pseudomonas sp.
P55664 0.000528 45 25 6 182 3 NGR_a01490 Putative threonine dehydratase Sinorhizobium fredii (strain NBRC 101917 / NGR234)
Q9ZSS6 0.000549 45 26 7 178 1 OMR1 Threonine dehydratase biosynthetic, chloroplastic Arabidopsis thaliana
P37887 0.000592 45 35 1 77 1 cysK Cysteine synthase Bacillus subtilis (strain 168)
O94634 0.000618 45 38 0 49 3 SPBC1677.03c Threonine dehydratase, mitochondrial Schizosaccharomyces pombe (strain 972 / ATCC 24843)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS13280
Feature type CDS
Gene dpaL
Product diaminopropionate ammonia-lyase
Location 283845 - 285044 (strand: 1)
Length 1200 (nucleotides) / 399 (amino acids)

Contig

Accession term accessions NZ_VXKB01000003 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 425895 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2765
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF00291 Pyridoxal-phosphate dependent enzyme

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1171 Amino acid transport and metabolism (E) E Threonine deaminase

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K01751 diaminopropionate ammonia-lyase [EC:4.3.1.15] - -

Protein Sequence

MSVFSLKLDISDNRFFNGKHSPLFSRAEAHKALKFHEKITGYHPTPLYDMKDLAGLLGVGNILVKDESQRFELNAFKILGGSYAIAHLLCEKYNMNIDDFSFEKLKSTLTEKMTFATTTDGNHGRGVAWAARALGQKAVVYMPKGSAQERVDHITGLGAECIVTDMNYDDTVRLTMENAKKHGWLVVQDTACEGYTKIPTWIMQGYTTLAAEAVAQMKEMKITRPTHVLLQAGVGAMAGGVLGYLVDEFGAKDLHSIIVEPELADCLYRSSLKGEIVNVGGDMATIMAGLACGEPNPIGWELMRNCATQFISCEDAVAALGMRVLGNPYGSDTRVISGESGAVGLGVLAAVHHHPKRAELMAKLGLNSDSVILVINTEGDTDTKHYREVVWEGKNPAQK

Flanking regions ( +/- flanking 50bp)

CCGGCCGGTAACGGCCGGGTCGTTTTCCCGATGATATGAGGTGAGGCAATATGTCTGTCTTCTCACTAAAGTTAGATATTTCAGATAACCGTTTCTTTAACGGAAAACATTCTCCGCTTTTCTCCCGCGCTGAAGCTCACAAAGCGCTGAAATTTCATGAGAAAATTACGGGATACCATCCTACCCCGCTGTATGACATGAAAGATCTCGCCGGATTACTCGGTGTGGGCAACATCCTGGTAAAGGATGAATCACAGCGTTTTGAACTCAATGCCTTCAAAATTTTGGGCGGCTCTTATGCTATCGCCCACCTGTTGTGCGAAAAGTACAACATGAATATTGATGATTTCTCCTTTGAGAAACTCAAAAGCACGCTGACCGAAAAAATGACGTTTGCCACCACAACTGATGGTAACCACGGACGCGGTGTGGCATGGGCTGCCCGTGCATTAGGTCAGAAAGCTGTTGTTTATATGCCGAAAGGCTCCGCACAGGAGCGCGTGGATCACATCACCGGTCTTGGCGCTGAGTGTATCGTCACCGATATGAACTATGACGATACCGTTCGTCTCACCATGGAAAATGCCAAAAAACATGGCTGGCTCGTGGTGCAGGATACCGCCTGTGAAGGCTATACCAAGATCCCGACCTGGATTATGCAGGGCTACACAACGCTGGCTGCCGAAGCCGTCGCCCAGATGAAAGAAATGAAGATCACACGCCCGACCCACGTTCTGTTACAGGCGGGTGTGGGCGCGATGGCAGGCGGCGTGCTGGGCTATCTGGTTGATGAGTTCGGCGCAAAAGATCTGCACTCCATTATTGTTGAGCCGGAACTGGCAGACTGCCTCTACCGTTCAAGCCTGAAAGGCGAAATCGTCAATGTCGGCGGGGATATGGCAACCATTATGGCAGGTCTTGCCTGTGGCGAACCAAACCCGATTGGCTGGGAACTGATGCGCAACTGTGCGACGCAGTTTATCTCCTGTGAAGATGCGGTTGCCGCCCTCGGTATGCGTGTTCTCGGTAACCCGTACGGCAGTGATACCCGTGTGATTTCCGGTGAGTCCGGTGCGGTGGGTCTGGGCGTACTGGCAGCGGTTCATCATCACCCGAAACGCGCGGAACTGATGGCAAAACTCGGTCTTAACAGTGATTCCGTCATCCTCGTTATCAACACCGAAGGTGACACAGATACAAAACATTACCGCGAAGTGGTCTGGGAAGGTAAAAACCCGGCGCAGAAATAAGCATCTTACGGCGGTGCCGCGTGTATCCGTCGTGACGAATTTAACTGATT