Homologs in group_89

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11 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_07875 FBDBKF_07875 96.8 Morganella morganii S1 tnaA tryptophanase
FBDBKF_11135 FBDBKF_11135 52.9 Morganella morganii S1 tpl tyrosine phenol-lyase
EHELCC_05090 EHELCC_05090 52.9 Morganella morganii S2 tpl tyrosine phenol-lyase
EHELCC_13705 EHELCC_13705 96.8 Morganella morganii S2 tnaA tryptophanase
NLDBIP_05410 NLDBIP_05410 52.9 Morganella morganii S4 tpl tyrosine phenol-lyase
NLDBIP_14150 NLDBIP_14150 96.8 Morganella morganii S4 tnaA tryptophanase
LHKJJB_02290 LHKJJB_02290 52.9 Morganella morganii S3 tpl tyrosine phenol-lyase
LHKJJB_08700 LHKJJB_08700 96.8 Morganella morganii S3 tnaA tryptophanase
HKOGLL_08250 HKOGLL_08250 96.8 Morganella morganii S5 tnaA tryptophanase
HKOGLL_15670 HKOGLL_15670 52.9 Morganella morganii S5 tpl tyrosine phenol-lyase
F4V73_RS08140 F4V73_RS08140 52.6 Morganella psychrotolerans - tyrosine phenol-lyase

Distribution of the homologs in the orthogroup group_89

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_89

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
A8AKE2 0.0 847 86 1 464 3 tnaA Tryptophanase Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696)
Q7N8C9 0.0 840 85 1 465 3 tnaA Tryptophanase Photorhabdus laumondii subsp. laumondii (strain DSM 15139 / CIP 105565 / TT01)
A1JJH3 0.0 831 84 1 465 3 tnaA Tryptophanase Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)
Q59342 0.0 827 84 1 464 3 tnaA Tryptophanase Klebsiella aerogenes
Q87JQ6 0.0 747 75 1 465 3 tnaA Tryptophanase Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
A1VC86 0.0 746 75 1 464 3 tnaA Tryptophanase Nitratidesulfovibrio vulgaris (strain DP4)
Q729Z3 0.0 746 75 1 464 3 tnaA Tryptophanase Nitratidesulfovibrio vulgaris (strain ATCC 29579 / DSM 644 / CCUG 34227 / NCIMB 8303 / VKM B-1760 / Hildenborough)
A8G097 0.0 739 73 1 465 3 tnaA Tryptophanase Shewanella sediminis (strain HAW-EB3)
P28796 0.0 689 70 1 464 1 tnaA Tryptophanase Proteus vulgaris
Q7NYV9 0.0 681 69 2 462 3 tnaA Tryptophanase Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / CCUG 213 / NBRC 12614 / NCIMB 9131 / NCTC 9757 / MK)
A4SNA7 0.0 673 70 1 464 3 tnaA Tryptophanase Aeromonas salmonicida (strain A449)
A0KJP3 0.0 668 70 1 464 3 tnaA Tryptophanase Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / DSM 30187 / BCRC 13018 / CCUG 14551 / JCM 1027 / KCTC 2358 / NCIMB 9240 / NCTC 8049)
Q9ZNA8 0.0 645 67 2 464 3 tnaA Tryptophanase Proteus inconstans
Q8R9K5 0.0 595 60 1 464 3 tnaA Tryptophanase Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4)
Q9CL27 0.0 568 60 4 469 3 tnaA Tryptophanase Pasteurella multocida (strain Pm70)
B0UTZ3 0.0 559 59 4 469 3 tnaA Tryptophanase Histophilus somni (strain 2336)
Q0I3R5 0.0 559 59 4 469 3 tnaA Tryptophanase Histophilus somni (strain 129Pt)
B5YXB2 0.0 554 59 4 469 3 tnaA Tryptophanase Escherichia coli O157:H7 (strain EC4115 / EHEC)
Q8XB34 0.0 554 59 4 469 3 tnaA Tryptophanase Escherichia coli O157:H7
Q7MCR1 0.0 553 58 4 469 3 tnaA Tryptophanase Vibrio vulnificus (strain YJ016)
Q8D5Q4 0.0 553 58 4 469 3 tnaA Tryptophanase Vibrio vulnificus (strain CMCP6)
P0A854 0.0 553 59 4 469 3 tnaA Tryptophanase Shigella flexneri
Q0SYP7 0.0 553 59 4 469 3 tnaA Tryptophanase Shigella flexneri serotype 5b (strain 8401)
B6I3U1 0.0 553 59 4 469 3 tnaA Tryptophanase Escherichia coli (strain SE11)
B7NF25 0.0 553 59 4 469 3 tnaA Tryptophanase Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC)
P0A853 0.0 553 59 4 469 1 tnaA Tryptophanase Escherichia coli (strain K12)
B1IX30 0.0 553 59 4 469 3 tnaA Tryptophanase Escherichia coli (strain ATCC 8739 / DSM 1576 / NBRC 3972 / NCIMB 8545 / WDCM 00012 / Crooks)
Q0TB00 0.0 553 59 4 469 3 tnaA Tryptophanase Escherichia coli O6:K15:H31 (strain 536 / UPEC)
B1X9T7 0.0 553 59 4 469 3 tnaA Tryptophanase Escherichia coli (strain K12 / DH10B)
C4ZYY6 0.0 553 59 4 469 3 tnaA Tryptophanase Escherichia coli (strain K12 / MC4100 / BW2952)
B7M560 0.0 553 59 4 469 3 tnaA Tryptophanase Escherichia coli O8 (strain IAI1)
B7N212 0.0 553 59 4 469 3 tnaA Tryptophanase Escherichia coli O81 (strain ED1a)
B7NR10 0.0 553 59 4 469 3 tnaA Tryptophanase Escherichia coli O7:K1 (strain IAI39 / ExPEC)
B7L853 0.0 553 59 4 469 3 tnaA Tryptophanase Escherichia coli (strain 55989 / EAEC)
B7MGC9 0.0 553 59 4 469 3 tnaA Tryptophanase Escherichia coli O45:K1 (strain S88 / ExPEC)
B7UMH5 0.0 553 59 4 469 3 tnaA Tryptophanase Escherichia coli O127:H6 (strain E2348/69 / EPEC)
A7ZTR3 0.0 553 59 4 469 3 tnaA Tryptophanase Escherichia coli O139:H28 (strain E24377A / ETEC)
Q4QML4 0.0 553 57 4 469 3 tnaA Tryptophanase Haemophilus influenzae (strain 86-028NP)
B7LK50 0.0 553 59 4 469 3 tnaA Tryptophanase Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CCUG 18766 / IAM 14443 / JCM 21226 / LMG 7866 / NBRC 102419 / NCTC 12128 / CDC 0568-73)
B1LL35 0.0 552 59 4 469 3 tnaA Tryptophanase Escherichia coli (strain SMS-3-5 / SECEC)
B2TUR7 0.0 551 59 4 469 3 tnaA Tryptophanase Shigella boydii serotype 18 (strain CDC 3083-94 / BS512)
C3LUI5 0.0 551 58 4 467 3 tnaA Tryptophanase Vibrio cholerae serotype O1 (strain M66-2)
Q9KN05 0.0 551 58 4 467 3 tnaA Tryptophanase Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
Q8FBV2 0.0 551 58 4 469 3 tnaA Tryptophanase Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
A8A6H0 0.0 550 58 4 469 3 tnaA Tryptophanase Escherichia coli O9:H4 (strain HS)
A5EYI0 0.0 549 58 4 467 3 tnaA Tryptophanase Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395)
O07674 0.0 548 57 4 469 3 tnaA Tryptophanase Haemophilus influenzae
Q894M8 0.0 539 55 1 464 3 tnaA Tryptophanase Clostridium tetani (strain Massachusetts / E88)
P31014 0.0 521 55 3 458 1 tnaA1 Tryptophanase 1 Symbiobacterium thermophilum (strain DSM 24528 / JCM 14929 / IAM 14863 / T)
P31015 6.67e-179 511 55 3 459 1 tnaA2 Tryptophanase 2 Symbiobacterium thermophilum (strain DSM 24528 / JCM 14929 / IAM 14863 / T)
Q8RHM6 2.08e-165 477 53 3 456 3 tpl Tyrosine phenol-lyase Fusobacterium nucleatum subsp. nucleatum (strain ATCC 25586 / DSM 15643 / BCRC 10681 / CIP 101130 / JCM 8532 / KCTC 2640 / LMG 13131 / VPI 4355)
P31011 1.47e-164 475 51 3 458 1 tpl Tyrosine phenol-lyase Enterobacter agglomerans
Q9CMK9 1.62e-162 469 51 4 464 3 tpl Tyrosine phenol-lyase Pasteurella multocida (strain Pm70)
E6SFG5 1.38e-161 468 51 4 464 3 tpl Tyrosine phenol-lyase Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / NCIMB 10167 / NRRL B-3866 / 7 KIP)
D9R201 2.49e-160 464 52 5 466 3 tpl Tyrosine phenol-lyase Lacrimispora saccharolytica (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1)
Q2S1V4 9.55e-160 463 51 6 463 3 tnaA Tryptophanase Salinibacter ruber (strain DSM 13855 / M31)
P31013 1.92e-159 462 50 3 458 1 tpl Tyrosine phenol-lyase Citrobacter freundii
Q08897 5.03e-159 461 51 3 459 1 tpl Tyrosine phenol-lyase Symbiobacterium thermophilum (strain DSM 24528 / JCM 14929 / IAM 14863 / T)
O08501 5.55e-159 461 51 3 459 3 tpl Tyrosine phenol-lyase Symbiobacterium sp. (strain SC-1)
P31012 5.84e-159 461 50 3 458 3 tpl Tyrosine phenol-lyase Citrobacter intermedius
A2EYC4 3.28e-158 459 51 5 458 3 TVAG_054490 Probable beta-eliminating lyase Trichomonas vaginalis (strain ATCC PRA-98 / G3)
Q897C2 2.74e-156 454 49 3 458 3 tpl Tyrosine phenol-lyase Clostridium tetani (strain Massachusetts / E88)
B2J908 5.11e-151 441 49 3 457 3 tpl Tyrosine phenol-lyase Nostoc punctiforme (strain ATCC 29133 / PCC 73102)
O30971 1.84e-148 434 49 4 462 3 tnaA Tryptophanase Rhodobacter capsulatus
Q0C406 5.2e-145 425 48 6 459 3 tnaA Tryptophanase Hyphomonas neptunium (strain ATCC 15444)
Q9YCI2 1.44e-128 384 46 7 462 3 tnaA Probable tryptophanase Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1)
Q9HMV2 1.14e-121 365 41 4 455 3 tnaA Probable tryptophanase Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1)
B0R7Q6 1.14e-121 365 41 4 455 3 tnaA Probable tryptophanase Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1)
Q54UE3 6.28e-46 160 50 1 165 5 DDB_G0281127 Putative beta-eliminating lyase-like protein Dictyostelium discoideum

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS13145
Feature type CDS
Gene tnaA
Product tryptophanase
Location 245827 - 247224 (strand: -1)
Length 1398 (nucleotides) / 465 (amino acids)

Contig

Accession term accessions NZ_VXKB01000003 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 425895 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_89
Orthogroup size 12
N. genomes 6

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Genomic region

Domains

PF01212 Beta-eliminating lyase

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3033 Amino acid transport and metabolism (E) E Tryptophanase

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K01667 tryptophanase [EC:4.1.99.1] Tryptophan metabolism
Metabolic pathways		 -

Protein Sequence

MKRIPEPFRIKMVENIRMTTRNERDVALKEAGYNPFLLPGDVVFIDLLTDSGTGAMSDRQWAGLMMGDEAYAGSRNYYHLCDQVKKLIGYPFTIPTHQGRGAEQILFPSLIARRRKTGADKPVFISNFHFDTTAAHVELNGAKAINVVTPKAFDTTTYYDWKGDFDLDLLNAAIAEHGAKNVAAIITTVTCNSSGGQPVSLANMKAVYDIAKKHDIPVVIDSARFCENAWFIKQREKGYADKTVKEIVKEMYKYGDMLTMSAKKDSLVNIGGLCCFRDDEDLFNEVRIRCVPMEGFVTYGGLAGRDMEALAIGLEEGMDEDYLRYRISQVEYLGERLREAGIPIQFPVGGHAVFVDAKKMLPHIPGDQFPAHALNNALYLESGIRGVEIGSLLLGRDPETGIQKPSPMELLRLTIPRRVYTNDHMDYIADAFIRLMDNASAIKGLTFTYEPPVLRHFVARLKPVM

Flanking regions ( +/- flanking 50bp)

AATAAAACAGGGGCGGAATAATAAACAGCTGCCTGACGGAGAATTAAATAATGAAACGTATTCCTGAGCCGTTCCGTATTAAAATGGTAGAAAATATCCGTATGACCACCCGTAATGAGCGCGACGTTGCGCTGAAGGAGGCCGGATATAACCCGTTTTTATTACCCGGGGATGTGGTTTTTATCGATCTGCTGACAGACTCAGGTACCGGTGCAATGAGTGATCGCCAGTGGGCGGGTCTGATGATGGGGGATGAGGCGTATGCCGGTTCCCGTAACTATTATCATCTGTGTGATCAGGTGAAAAAGTTGATTGGTTATCCGTTTACTATTCCGACTCACCAGGGACGCGGCGCTGAGCAGATTCTGTTCCCGTCACTGATCGCCCGCCGCCGTAAAACCGGGGCGGATAAACCGGTCTTTATCTCAAATTTCCACTTTGATACAACGGCAGCTCACGTAGAGCTGAACGGCGCAAAAGCGATTAACGTCGTGACACCGAAAGCTTTTGATACCACGACGTATTATGACTGGAAAGGGGATTTTGATTTAGATCTTCTCAATGCTGCGATTGCAGAGCACGGCGCGAAAAACGTGGCCGCTATTATCACTACGGTGACCTGTAACAGCTCCGGCGGACAGCCGGTTTCGCTCGCCAATATGAAAGCGGTGTACGACATCGCGAAGAAACATGATATCCCGGTGGTTATCGATTCCGCCCGTTTCTGTGAAAACGCCTGGTTTATTAAACAGCGCGAAAAAGGGTATGCAGACAAAACCGTCAAAGAAATCGTCAAAGAGATGTATAAATACGGCGATATGCTGACAATGTCGGCGAAAAAAGATTCTCTCGTTAATATCGGCGGGCTGTGTTGCTTCCGTGATGATGAAGACCTGTTTAATGAAGTGCGCATCCGTTGTGTGCCGATGGAAGGCTTTGTGACATACGGCGGTCTGGCCGGACGTGATATGGAAGCGCTGGCAATCGGGCTGGAAGAGGGGATGGATGAAGATTATCTCCGCTACCGGATTTCTCAGGTTGAATATCTGGGTGAGCGCCTGCGCGAAGCCGGTATTCCGATCCAGTTCCCGGTCGGCGGACACGCGGTATTTGTCGATGCGAAAAAAATGCTGCCGCATATTCCGGGCGATCAGTTCCCGGCGCATGCCCTGAATAACGCACTGTACCTGGAGTCCGGCATACGCGGCGTGGAAATCGGCTCGCTGCTGTTAGGGCGTGATCCTGAAACCGGCATTCAGAAACCGTCTCCGATGGAGTTACTGCGTCTGACTATTCCCCGTCGTGTGTATACCAACGATCATATGGACTATATTGCAGATGCATTTATTCGCCTGATGGATAACGCATCGGCGATCAAAGGGCTGACATTCACTTATGAACCCCCGGTTCTGCGTCACTTTGTCGCCCGCCTGAAACCTGTCATGTAGCTCTGTTACGTAAACCTGTCGTCTTACAGGAGGATGTTACGGCATCCTCC