Orthogroup:group_89


Homologs in group_89

Help

12 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_07875 FBDBKF_07875 Morganella morganii S1 tnaA tryptophanase
FBDBKF_11135 FBDBKF_11135 Morganella morganii S1 tpl tyrosine phenol-lyase
EHELCC_05090 EHELCC_05090 Morganella morganii S2 tpl tyrosine phenol-lyase
EHELCC_13705 EHELCC_13705 Morganella morganii S2 tnaA tryptophanase
NLDBIP_05410 NLDBIP_05410 Morganella morganii S4 tpl tyrosine phenol-lyase
NLDBIP_14150 NLDBIP_14150 Morganella morganii S4 tnaA tryptophanase
LHKJJB_02290 LHKJJB_02290 Morganella morganii S3 tpl tyrosine phenol-lyase
LHKJJB_08700 LHKJJB_08700 Morganella morganii S3 tnaA tryptophanase
HKOGLL_08250 HKOGLL_08250 Morganella morganii S5 tnaA tryptophanase
HKOGLL_15670 HKOGLL_15670 Morganella morganii S5 tpl tyrosine phenol-lyase
F4V73_RS08140 F4V73_RS08140 Morganella psychrotolerans - tyrosine phenol-lyase
F4V73_RS13145 F4V73_RS13145 Morganella psychrotolerans tnaA tryptophanase

Distribution of group_89 homologs

Help

Number of homologs in each genome (first column and blue bar chart)

Download SVG

Phylogeny of group_89 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_89

Orthogroup content: 12 members

Help

This page summarizes the annotation of all members of the orthologous group group_89.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 tnaA 6
2 tpl 5
3 - 1

Product

# Product Occurence
1 tryptophanase 6
2 tyrosine phenol-lyase 6

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG3033 12 E Amino acid transport and metabolism (E) Tryptophanase

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K01667 6 tryptophanase [EC:4.1.99.1] Tryptophan metabolism
Metabolic pathways		 -
K01668 6 tyrosine phenol-lyase [EC:4.1.99.2] Tyrosine metabolism -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01212 12 Beta-eliminating lyase

Annotations of the 70 SwissProt hits

Annotation Number of occurrences
Probable beta-eliminating lyase 1
Probable tryptophanase 3
Putative beta-eliminating lyase-like protein 1
Tryptophanase 51
Tryptophanase 1 1
Tryptophanase 2 1
Tyrosine phenol-lyase 11
Uncharacterized protein R102.4 1

Protein length

Min length 456
Max length 465
Mean length (sd) 460.5 (4.7)
Median length 460.5

Protein length distribution