Homologs in group_372

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7 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_13830 FBDBKF_13830 94.5 Morganella morganii S1 dtpB dipeptide/tripeptide permease DtpB
EHELCC_11500 EHELCC_11500 94.5 Morganella morganii S2 dtpB dipeptide/tripeptide permease DtpB
NLDBIP_11845 NLDBIP_11845 94.5 Morganella morganii S4 dtpB dipeptide/tripeptide permease DtpB
LHKJJB_11705 LHKJJB_11705 94.5 Morganella morganii S3 dtpB dipeptide/tripeptide permease DtpB
HKOGLL_10315 HKOGLL_10315 94.5 Morganella morganii S5 dtpB dipeptide/tripeptide permease DtpB
PMI_RS01190 PMI_RS01190 78.2 Proteus mirabilis HI4320 dtpB dipeptide/tripeptide permease DtpB
PMI_RS07725 PMI_RS07725 52.2 Proteus mirabilis HI4320 dtpA dipeptide/tripeptide permease DtpA

Distribution of the homologs in the orthogroup group_372

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_372

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q8GFA2 0.0 773 74 0 486 3 dtpB Dipeptide and tripeptide permease B Photorhabdus luminescens
A0KMY1 0.0 771 76 0 484 3 dtpB Dipeptide and tripeptide permease B Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / DSM 30187 / BCRC 13018 / CCUG 14551 / JCM 1027 / KCTC 2358 / NCIMB 9240 / NCTC 8049)
B6VMU9 0.0 766 74 0 487 3 dtpB Dipeptide and tripeptide permease B Photorhabdus asymbiotica subsp. asymbiotica (strain ATCC 43949 / 3105-77)
D0ZGL2 0.0 756 73 0 480 3 dtpB Dipeptide and tripeptide permease B Edwardsiella tarda (strain EIB202)
P36837 0.0 742 73 0 483 1 dtpB Dipeptide and tripeptide permease B Escherichia coli (strain K12)
A1JRI8 0.0 741 70 0 493 3 dtpB Dipeptide and tripeptide permease B Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)
D3V3D1 0.0 741 73 1 486 3 dtpB Dipeptide and tripeptide permease B Xenorhabdus bovienii (strain SS-2004)
Q8ZLD6 0.0 739 72 1 490 3 dtpB Dipeptide and tripeptide permease B Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q32AW5 0.0 734 72 0 483 3 dtpB Dipeptide and tripeptide permease B Shigella dysenteriae serotype 1 (strain Sd197)
B5FDK5 0.0 634 62 0 482 3 dtpB Dipeptide and tripeptide permease B Aliivibrio fischeri (strain MJ11)
A8AH15 0.0 522 52 3 489 3 dtpA Dipeptide and tripeptide permease A Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696)
C9Y3M8 7.79e-180 516 51 3 489 3 dtpA Dipeptide and tripeptide permease A Cronobacter turicensis (strain DSM 18703 / CCUG 55852 / LMG 23827 / z3032)
B5XWP3 1.93e-179 515 52 3 489 3 dtpA Dipeptide and tripeptide permease A Klebsiella pneumoniae (strain 342)
Q8ZPM6 2.79e-178 512 50 3 493 2 dtpA Dipeptide and tripeptide permease A Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q8X651 3.14e-178 512 52 3 486 3 dtpA Dipeptide and tripeptide permease A Escherichia coli O157:H7
Q8FH91 6.59e-178 511 52 3 486 3 dtpA Dipeptide and tripeptide permease A Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P77304 7.76e-178 511 52 3 486 1 dtpA Dipeptide and tripeptide permease A Escherichia coli (strain K12)
Q8Z6Q5 7.78e-178 511 50 3 493 3 dtpA Dipeptide and tripeptide permease A Salmonella typhi
A4W9W3 9.3e-175 503 53 2 473 3 dtpA Dipeptide and tripeptide permease A Enterobacter sp. (strain 638)
D2TBH1 2.24e-174 502 51 2 485 3 dtpA Dipeptide and tripeptide permease A Erwinia pyrifoliae (strain DSM 12163 / CIP 106111 / Ep16/96)
C6DH09 2.13e-173 500 51 2 484 3 dtpA Dipeptide and tripeptide permease A Pectobacterium carotovorum subsp. carotovorum (strain PC1)
D0Z7W2 8.23e-173 498 51 4 488 3 dtpA Dipeptide and tripeptide permease A Edwardsiella tarda (strain EIB202)
Q0WEG0 1.42e-171 495 52 4 484 3 dtpA Dipeptide and tripeptide permease A Yersinia pestis
B4EY98 3.06e-171 494 51 3 483 3 dtpA Dipeptide and tripeptide permease A Proteus mirabilis (strain HI4320)
A8GDZ4 6.18e-167 484 52 3 488 3 dtpA Dipeptide and tripeptide permease A Serratia proteamaculans (strain 568)
Q7NRM5 1.4e-162 472 51 2 478 3 dtpA Dipeptide and tripeptide permease A Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / CCUG 213 / NBRC 12614 / NCIMB 9131 / NCTC 9757 / MK)
A0A2R9TD79 5.48e-57 200 29 11 510 1 YEP4_02370 Peptide transporter YePEPT Yersinia enterocolitica subsp. palearctica serotype O:3 (strain YE-P4)
C0PWD2 2.64e-54 192 28 9 481 3 dtpD Dipeptide permease D Salmonella paratyphi C (strain RKS4594)
Q7CQY0 2.99e-54 192 28 9 481 3 dtpD Dipeptide permease D Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
D0ZQC5 2.99e-54 192 28 9 481 3 dtpD Dipeptide permease D Salmonella typhimurium (strain 14028s / SGSC 2262)
Q57RM6 3.09e-54 192 28 9 481 3 dtpD Dipeptide permease D Salmonella choleraesuis (strain SC-B67)
B5XZE5 4.02e-53 189 28 9 481 3 dtpD Dipeptide permease D Klebsiella pneumoniae (strain 342)
A6T6E2 8.45e-53 188 28 9 481 3 dtpD Dipeptide permease D Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578)
A8AJB3 3.72e-51 184 26 11 494 3 dtpD Dipeptide permease D Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696)
Q8X9D3 5.28e-50 181 27 10 480 1 dtpD Dipeptide permease D Escherichia coli O157:H7
P94408 7.35e-50 181 29 9 436 3 yclF Uncharacterized transporter YclF Bacillus subtilis (strain 168)
D2TNL4 2.99e-49 179 26 10 483 3 dtpD Dipeptide permease D Citrobacter rodentium (strain ICC168)
Q83S84 3.06e-49 179 26 10 480 3 dtpD Dipeptide permease D Shigella flexneri
P75742 3.57e-49 179 27 10 480 1 dtpD Dipeptide permease D Escherichia coli (strain K12)
P0C2U2 7.49e-49 178 28 13 462 3 dtpT Di-/tripeptide transporter Lactococcus lactis subsp. lactis (strain IL1403)
A2RMA8 9.57e-48 175 27 12 461 3 dtpT Di-/tripeptide transporter Lactococcus lactis subsp. cremoris (strain MG1363)
P0C2U3 9.57e-48 175 27 12 461 1 dtpT Di-/tripeptide transporter Lactococcus lactis subsp. cremoris
P39276 3e-40 154 28 9 440 1 dtpC Dipeptide and tripeptide permease C Escherichia coli (strain K12)
P91679 1.56e-16 86 26 9 339 1 yin Peptide transporter family 1 Drosophila melanogaster
P36836 1.35e-15 83 24 15 410 1 SLC15A1 Solute carrier family 15 member 1 Oryctolagus cuniculus
Q9ES07 5.92e-15 81 25 14 430 1 Slc15a2 Solute carrier family 15 member 2 Mus musculus
Q9JIP7 5.96e-15 81 23 10 392 1 Slc15a1 Solute carrier family 15 member 1 Mus musculus
O07380 1.2e-14 79 26 2 180 3 dtpT Di-/tripeptide transporter Lactobacillus helveticus
Q8WMX5 1.2e-14 80 24 14 397 2 SLC15A1 Solute carrier family 15 member 1 Canis lupus familiaris
Q16348 1.4e-14 80 28 5 235 1 SLC15A2 Solute carrier family 15 member 2 Homo sapiens
P51574 3.21e-14 79 23 10 397 2 Slc15a1 Solute carrier family 15 member 1 Rattus norvegicus
Q63424 4.4e-14 78 24 16 435 1 Slc15a2 Solute carrier family 15 member 2 Rattus norvegicus
P46029 7.53e-14 77 27 5 242 1 SLC15A2 Solute carrier family 15 member 2 Oryctolagus cuniculus
P46059 9.17e-13 74 22 10 383 1 SLC15A1 Solute carrier family 15 member 1 Homo sapiens
B0S6T2 1.92e-12 73 24 10 341 1 slc15a2 Solute carrier family 15 member 2 Danio rerio
Q17758 9.15e-11 68 23 7 345 1 pept-2 Peptide transporter family 2 Caenorhabditis elegans
Q21219 1.11e-10 67 30 3 193 2 pept-1 Peptide transporter family 1 Caenorhabditis elegans
Q9M1I2 1.06e-08 61 24 6 262 2 NPF5.4 Protein NRT1/ PTR FAMILY 5.4 Arabidopsis thaliana
O01840 4.92e-08 59 26 2 169 1 pept-3 Peptide transporter 3 Caenorhabditis elegans
Q8VZE2 1.11e-06 54 24 3 196 2 NPF5.14 Protein NRT1/ PTR FAMILY 5.14 Arabidopsis thaliana
Q9SK99 1.5e-06 54 23 4 201 2 NPF5.15 Protein NRT1/ PTR FAMILY 5.15 Arabidopsis thaliana
Q9SK96 2.62e-05 50 21 11 477 2 NPF5.16 Protein NRT1/ PTR FAMILY 5.16 Arabidopsis thaliana
Q9FNL7 3.13e-05 50 21 2 224 2 NPF5.2 Protein NRT1/ PTR FAMILY 5.2 Arabidopsis thaliana
P32901 4.61e-05 49 21 19 533 1 PTR2 Peptide transporter PTR2 Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Q9LVE0 6.2e-05 49 26 3 210 1 NPF6.4 Protein NRT1/ PTR FAMILY 6.4 Arabidopsis thaliana
Q05085 7.57e-05 48 24 3 240 1 NPF6.3 Protein NRT1/ PTR FAMILY 6.3 Arabidopsis thaliana
Q9FNL8 0.000409 46 21 3 208 2 NPF5.3 Protein NRT1/ PTR FAMILY 5.3 Arabidopsis thaliana
Q0WSZ6 0.000427 46 22 3 209 2 NPF5.13 Protein NRT1/ PTR FAMILY 5.13 Arabidopsis thaliana
Q84WG0 0.000476 46 24 4 208 2 NPF8.4 Protein NRT1/ PTR FAMILY 8.4 Arabidopsis thaliana
Q9C7U1 0.000622 46 24 7 299 2 NPF5.12 Protein NRT1/ PTR FAMILY 5.12 Arabidopsis thaliana
Q0WP01 0.000639 46 26 2 184 2 NPF5.10 Protein NRT1/ PTR FAMILY 5.10 Arabidopsis thaliana

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS12695
Feature type CDS
Gene dtpB
Product dipeptide/tripeptide permease DtpB
Location 138302 - 139783 (strand: 1)
Length 1482 (nucleotides) / 493 (amino acids)

Contig

Accession term accessions NZ_VXKB01000003 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 425895 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_372
Orthogroup size 8
N. genomes 7

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Genomic region

Domains

PF00854 POT family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3104 Amino acid transport and metabolism (E) E Dipeptide/tripeptide permease

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03305 proton-dependent oligopeptide transporter, POT family - -

Protein Sequence

MSKPAQVGLFNQPKPFFMIFIVELWERFGYYGVQGILAVYFVQKLGFSQEQAFITFGAFAALVYGLISIGGYVGDHVLGTKRTIILGAIVMAVGYFMTGLSIMNPDLIFYALGTIAVGNGLFKANPASLLSKCYAPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKYSYTVTYNICGIGLLVALVVFLFCQKMVRNIGSEPDHKPMKFGSLLVVLAGSVATVFLCAWLLHNVVVANYVLLCVTAVVIFFFFRETFKLKGVERNKMYVAFVLMLEAVVFYVLYAQMPTSLNFFAIYNVHHTIMGIDVHPVSFQALNPFWIIVLSPVLAYFYSKMGARGKDISMPGKFTIGMFCCSAGFLTAAASGMWFADATGMTSPWFIVLVYFFQAVGELMISALGLAMIAAFVPQYLMGFILGMWFLTQAMATLLGGYVATFTAAPQGVTDPLQTLGVYTDVFGKIGIATFVVALIMWAIVPKLNKIMKDDSVTKNLA

Flanking regions ( +/- flanking 50bp)

CCGGAAAAAATTTAGTGTAATGAATAATTATTAATAAGAGGCATTTAACCATGAGTAAACCCGCGCAGGTTGGATTGTTTAACCAACCTAAGCCATTCTTCATGATTTTTATCGTGGAGCTGTGGGAACGCTTCGGCTATTACGGTGTGCAAGGCATCCTGGCCGTCTACTTTGTTCAAAAACTGGGATTCAGTCAGGAACAGGCTTTTATCACCTTCGGGGCATTTGCTGCGCTGGTATACGGCCTGATCTCTATCGGGGGCTACGTCGGAGATCATGTCCTCGGCACCAAGCGGACCATCATTTTAGGGGCCATTGTGATGGCTGTCGGTTATTTTATGACCGGCCTCTCCATCATGAACCCGGATCTGATTTTCTATGCACTGGGGACAATCGCTGTCGGTAACGGCTTATTTAAAGCCAACCCGGCCAGCCTGCTATCAAAATGCTACGCGCCTAAAGATCCGCGTCTGGACGGAGCATTTACCCTGTTTTATATGTCGATCAACATCGGCTCCCTGATTTCCCTGTCTCTGGCACCGGTTATCGCTGACAAGTACAGCTATACCGTTACTTATAATATCTGCGGTATTGGTCTGCTGGTCGCCCTGGTAGTCTTCCTGTTCTGCCAGAAAATGGTTCGCAATATCGGTTCTGAGCCGGATCATAAACCAATGAAATTCGGCAGCCTGCTGGTCGTGTTAGCCGGTAGTGTGGCGACCGTTTTCCTGTGTGCATGGTTACTGCATAACGTGGTGGTAGCCAACTATGTGCTGCTCTGCGTAACCGCGGTGGTTATCTTCTTCTTCTTCCGCGAAACCTTCAAACTGAAAGGCGTTGAGCGCAACAAGATGTATGTCGCATTTGTTCTGATGCTGGAAGCGGTTGTCTTCTACGTCCTGTATGCACAGATGCCGACCTCACTGAACTTCTTCGCTATCTATAATGTGCATCACACCATTATGGGTATTGATGTGCACCCGGTCAGCTTCCAGGCACTGAACCCGTTCTGGATCATCGTCCTGAGCCCGGTTCTGGCCTATTTCTACAGTAAAATGGGGGCACGCGGCAAAGATATCTCTATGCCGGGTAAATTCACCATCGGTATGTTCTGCTGCTCCGCCGGCTTCCTGACCGCTGCCGCATCCGGTATGTGGTTTGCCGATGCCACCGGTATGACGTCACCATGGTTTATCGTGCTGGTCTATTTCTTCCAGGCGGTCGGCGAGCTGATGATCAGTGCGCTGGGTCTGGCGATGATTGCGGCGTTCGTTCCGCAATATCTGATGGGCTTTATTCTCGGAATGTGGTTCCTGACTCAGGCAATGGCAACACTATTGGGTGGTTATGTTGCGACATTTACCGCAGCACCGCAGGGTGTAACGGATCCGTTGCAAACCCTGGGTGTCTATACCGATGTATTCGGTAAAATAGGGATCGCCACTTTTGTTGTTGCCCTTATAATGTGGGCAATTGTACCGAAACTGAACAAAATCATGAAAGACGACAGCGTAACCAAAAATCTTGCCTGATAACAGCAGGCGCTGGCGTTGCAGCGCTTGTTTTCAGCAATATTTGTGTG