Homologs in group_3693

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2 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
PMI_RS05020 PMI_RS05020 24.5 Proteus mirabilis HI4320 - fimbrial protein
PMI_RS17145 PMI_RS17145 30.0 Proteus mirabilis HI4320 - fimbrial protein

Distribution of the homologs in the orthogroup group_3693

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3693

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P21648 5.96e-08 57 30 5 148 1 mrkD Fimbria adhesin protein Klebsiella pneumoniae

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS12575
Feature type CDS
Gene -
Product hypothetical protein
Location 108206 - 109387 (strand: -1)
Length 1182 (nucleotides) / 393 (amino acids)
In genomic island -

Contig

Accession NZ_VXKB01000003
Length 425895 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3693
Orthogroup size 3
N. genomes 2

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Genomic region

Domains

PF00419 Fimbrial protein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3539 Cell motility (N) N Pilin (type 1 fimbrial protein)

Protein Sequence

MRINCLFSLLLMITSMQVSAFSTITDIKGHVAPVWRGATNIRATIGVFNSGSYEFGEPIRDTSGRLIETEYIPHFHTSYSSPRFKCTKGETYRASVTAEGIGTVLGEKDGYAIIQSNVPGVGYRLDIGGAFSGTYVNPAITRYSKISTTGASDIDISCTATAQFALGVKVTLVRTNEQPDDNNGLAYLPVNVNSPYPVAISIYNRSGAIELDGRWTIPLKKVSNISVKYLKESCRYRFSNREQLLSLGKVSSAQFSGTGSTAYGDNGPQSVDVYIDCAGTNIIRNIRASVFEAIAGNEASGALRRQGVLLNNLTGQNAAKGVGVQVLIDNNIKPLGTDAPVYINDDTQWDVENSYEVIRGVYHFSVSGRYYQVAPEIREGKLQTTAGFTLIYR

Flanking regions ( +/- flanking 50bp)

TATGAATGATAAAGTTTCAGTTGTCACAGTGACCTGCGGGGTGATTGATCATGAGAATTAACTGTTTGTTTTCCCTGTTATTGATGATTACCAGCATGCAGGTATCAGCATTCAGCACCATTACCGATATTAAGGGGCACGTTGCCCCTGTCTGGCGGGGAGCGACAAATATTCGTGCCACTATCGGCGTATTTAACTCCGGCAGCTACGAATTTGGTGAGCCTATCCGTGATACCAGCGGACGATTAATTGAAACCGAATATATTCCGCATTTTCATACAAGTTATTCATCGCCCAGGTTTAAGTGTACAAAAGGTGAAACGTACCGTGCATCAGTGACTGCGGAAGGAATTGGTACTGTTCTGGGCGAGAAAGACGGCTATGCCATTATTCAGTCAAATGTGCCGGGAGTGGGTTACCGGCTGGATATCGGCGGTGCATTTTCAGGGACTTATGTTAATCCGGCTATCACCAGGTACAGTAAGATAAGCACAACCGGCGCATCAGACATTGATATCAGTTGTACCGCGACGGCTCAGTTCGCACTGGGCGTTAAAGTGACACTGGTCAGAACCAATGAACAGCCGGATGACAATAACGGACTCGCTTATCTGCCGGTGAATGTTAATTCACCTTATCCTGTTGCTATTTCAATATATAACCGCAGCGGAGCCATTGAGTTGGACGGACGCTGGACGATTCCGCTGAAAAAAGTCAGCAATATTTCTGTCAAATATCTGAAAGAGTCCTGCCGTTACCGCTTTTCCAACCGGGAGCAACTTCTCAGCCTCGGCAAAGTCAGTTCTGCTCAGTTTTCCGGAACAGGCAGTACCGCCTATGGTGATAATGGTCCGCAGAGTGTGGATGTGTATATTGATTGCGCGGGGACGAATATTATCCGTAATATCCGTGCATCTGTTTTTGAAGCTATTGCCGGAAATGAAGCATCAGGGGCATTGCGGCGTCAGGGGGTTTTGCTTAATAATCTGACCGGACAAAATGCAGCAAAAGGTGTCGGTGTTCAGGTGTTAATTGATAATAATATCAAGCCGCTCGGTACGGATGCGCCGGTTTATATTAATGACGACACTCAGTGGGATGTGGAAAACAGCTATGAGGTAATCAGAGGTGTTTATCATTTTTCTGTCAGTGGTCGCTATTATCAGGTTGCACCTGAAATTCGTGAAGGTAAACTTCAGACTACTGCCGGATTTACACTGATATACCGGTAAAACCATTGACTTGCCGGGTTTGGCAGCGTGATACAGCGCTGAAAATTACA