Homologs in group_345

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_11995 FBDBKF_11995 27.8 Morganella morganii S1 fhaC Hemolysin activation/secretion protein
EHELCC_14310 EHELCC_14310 27.8 Morganella morganii S2 fhaC Hemolysin activation/secretion protein
NLDBIP_15405 NLDBIP_15405 27.8 Morganella morganii S4 fhaC Hemolysin activation/secretion protein
LHKJJB_15205 LHKJJB_15205 27.8 Morganella morganii S3 fhaC Hemolysin activation/secretion protein
HKOGLL_14325 HKOGLL_14325 27.8 Morganella morganii S5 fhaC Hemolysin activation/secretion protein
F4V73_RS14660 F4V73_RS14660 28.3 Morganella psychrotolerans - ShlB/FhaC/HecB family hemolysin secretion/activation protein
PMI_RS14070 PMI_RS14070 25.1 Proteus mirabilis HI4320 - ShlB/FhaC/HecB family hemolysin secretion/activation protein

Distribution of the homologs in the orthogroup group_345

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_345

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q7CGD8 0.0 635 56 2 537 3 cdib Outer membrane transporter CdiB Yersinia pestis
P0DMJ8 1.61e-108 340 37 9 537 3 cdiB2 Outer membrane transporter CdiB-2 Burkholderia pseudomallei (strain 1026b)
Q3YL97 1.45e-59 211 29 10 564 1 cdiB Outer membrane transporter CdiB Escherichia coli
Q0T962 4.51e-59 210 29 10 564 3 cdiB Outer membrane transporter CdiB Escherichia coli O6:K15:H31 (strain 536 / UPEC)
E0SDG9 1.84e-56 202 28 12 568 3 cdiB Outer membrane transporter CdiB Dickeya dadantii (strain 3937)
P16465 7.45e-36 145 25 14 553 3 hpmB Hemolysin transporter protein HpmB Proteus mirabilis
P15321 1.03e-31 132 25 9 449 1 shlB Hemolysin transporter protein ShlB Serratia marcescens
B0UUL1 3.88e-21 100 23 16 502 3 ibpB Outer membrane transporter protein IbpB Histophilus somni (strain 2336)
P35077 8.43e-20 96 25 9 404 1 fhaC Filamentous hemagglutinin transporter protein FhaC Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251)
Q4QNS5 4.75e-09 62 19 13 476 3 hxuB Heme/hemopexin transporter protein HuxB Haemophilus influenzae (strain 86-028NP)
P45356 2.96e-07 57 19 13 464 1 hxuB Heme/hemopexin transporter protein HuxB Haemophilus influenzae
P44601 5.62e-06 53 19 15 461 3 hxuB Heme/hemopexin transporter protein HuxB Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS12500
Feature type CDS
Gene -
Product ShlB/FhaC/HecB family hemolysin secretion/activation protein
Location 90612 - 92354 (strand: -1)
Length 1743 (nucleotides) / 580 (amino acids)

Contig

Accession term accessions NZ_VXKB01000003 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 425895 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_345
Orthogroup size 8
N. genomes 7

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Genomic region

Domains

PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB
PF08479 POTRA domain, ShlB-type
PF17287 POTRA domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2831 Intracellular trafficking, secretion, and vesicular transport (U) U Hemolysin activation/secretion protein

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K07326 hemolysin activation/secretion protein Pertussis -

Protein Sequence

MNNRHKMVLSRFLPGAALFFIAGSALSAPGDQPVIPPEKRVSDQQFIHQQQQQDALDAQFGAKAPDVRLAAPVISSGKLIFPQETPCFEIRRVTVSGTESLPHWLPLQRLANEGTGQCLGVQGINLLMANMQNRLISHGWVTTRVLAPQQDLTQGTLALTVIPGRVRQVRFTDDSDKYATLYTAMPAREGNVLDLRDIEQGLENLQRLPTVEASMELVPGDEPGESDIVITRKQKKMWRLNAWVDNTGTDSTGKNQGGLMFALDNPSSLSDLFYVTATRDLLFTNGKGSTNYSAHYSVPLGYWQLALTGSKYDYVQTVAMLNSDARYKGRSESLNAQLSNVLYRDATAKTTLNYGVNFRQTRNYIQQTEIENQKRRTSTWKVGLDHRQYFGAAILDAGVSYQRGTRWFGAMPAWEEYRVRDSEDYATALSRILQFSASLTVPFAAGEQHFQYQSEYLRQLSGTPLTPQDQFSIGNRWSVRGFDGERTLSGDDGWTVRNTLTWFTPVPQQQLYLGMDYGRVDGHNRDWLIGQTLAGGVIGLKGACSPAGLSYDFSVGTPLSKPDGFKTDNAVFNFNISWQY

Flanking regions ( +/- flanking 50bp)

CTGCAATACCGCACCCTGCTTTTCTGACACTACTCTGCGACGCTAAAAACATGAATAACAGACATAAAATGGTCCTCTCCCGCTTCTTACCCGGCGCGGCACTCTTTTTTATTGCCGGTTCGGCTCTCAGTGCCCCGGGCGATCAGCCCGTTATTCCCCCGGAAAAACGGGTAAGTGACCAGCAGTTTATTCATCAGCAACAGCAGCAGGACGCACTGGATGCACAGTTCGGTGCCAAAGCCCCGGATGTCCGCCTTGCCGCCCCGGTTATCTCATCCGGTAAGCTGATTTTCCCGCAGGAAACACCGTGTTTTGAGATTCGCCGGGTGACCGTCAGTGGGACTGAATCACTGCCGCACTGGCTGCCGTTACAGCGCCTTGCAAATGAAGGTACGGGGCAATGTCTCGGCGTGCAGGGCATTAATCTGCTGATGGCCAATATGCAGAACCGCCTGATCAGCCACGGCTGGGTGACCACCCGCGTACTGGCGCCACAGCAGGATCTGACTCAGGGTACCCTGGCGCTGACCGTCATTCCCGGGCGCGTGCGCCAGGTGCGTTTTACGGACGATTCAGATAAGTACGCCACCCTTTACACCGCCATGCCTGCCCGCGAAGGCAATGTGCTGGATTTGCGGGATATCGAGCAGGGGCTGGAGAATTTACAGCGTCTGCCGACCGTCGAAGCGTCAATGGAGCTGGTGCCCGGCGATGAACCCGGCGAAAGCGACATTGTTATCACCCGCAAACAGAAAAAAATGTGGCGGCTCAATGCCTGGGTGGACAACACCGGCACGGACAGTACCGGGAAAAATCAGGGCGGGCTGATGTTCGCGCTGGATAACCCGTCCTCCCTCAGTGATCTGTTTTACGTGACCGCCACCCGTGATCTGCTGTTTACCAACGGCAAAGGCTCCACCAACTACAGCGCCCATTATTCTGTGCCGCTCGGTTATTGGCAGTTAGCCCTGACCGGCAGCAAATACGATTACGTGCAGACGGTGGCGATGCTCAACAGCGATGCCCGTTACAAAGGGCGCAGTGAAAGCCTTAATGCGCAGCTCAGTAATGTGCTGTACCGCGATGCGACCGCGAAAACCACCCTGAATTATGGCGTGAACTTTCGCCAGACCCGCAACTATATTCAGCAAACGGAAATAGAGAACCAGAAGCGCCGTACCAGCACCTGGAAGGTCGGGCTGGATCACCGGCAGTATTTTGGCGCGGCGATTCTGGATGCGGGCGTCAGTTACCAGCGCGGCACCCGCTGGTTTGGTGCGATGCCGGCGTGGGAAGAGTACCGTGTCCGTGACAGTGAAGATTACGCCACCGCACTCTCCCGTATTTTACAGTTCTCCGCCTCACTGACGGTGCCGTTTGCCGCCGGAGAGCAGCATTTTCAGTATCAGAGCGAATACCTGCGCCAGTTAAGCGGCACCCCGCTGACGCCGCAGGATCAGTTTTCCATCGGTAACCGCTGGTCAGTCCGCGGCTTTGACGGTGAACGTACCCTGAGCGGCGATGACGGCTGGACGGTACGCAATACCCTCACCTGGTTTACCCCTGTGCCGCAGCAGCAACTGTATCTCGGTATGGATTACGGGCGCGTGGACGGGCACAACCGCGACTGGCTTATCGGGCAGACCCTGGCAGGCGGCGTGATTGGTCTGAAGGGTGCGTGCTCCCCGGCCGGTCTCTCTTATGATTTCTCTGTCGGCACGCCGCTGTCCAAACCGGACGGCTTTAAAACCGACAATGCCGTATTTAATTTTAATATCAGCTGGCAGTACTGACGGGTACTGATGATGACTGCACTGATAGTGCAAAGGAATGAGCAATGAAT