Homologs in group_731

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_03230 FBDBKF_03230 89.8 Morganella morganii S1 kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC
EHELCC_07305 EHELCC_07305 89.8 Morganella morganii S2 kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC
NLDBIP_07630 NLDBIP_07630 89.8 Morganella morganii S4 kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC
LHKJJB_07165 LHKJJB_07165 89.8 Morganella morganii S3 kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC
HKOGLL_03765 HKOGLL_03765 89.8 Morganella morganii S5 kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC
PMI_RS18170 PMI_RS18170 76.8 Proteus mirabilis HI4320 kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC

Distribution of the homologs in the orthogroup group_731

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_731

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q8ZB47 1.82e-104 300 78 0 187 1 kdsC 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC Yersinia pestis
P0ABZ4 2.22e-101 293 77 0 183 3 kdsC 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC Escherichia coli (strain K12)
P0ABZ5 2.22e-101 293 77 0 183 3 kdsC 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC Escherichia coli O157:H7
P67654 4.94e-101 292 76 0 183 3 kdsC 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC Shigella flexneri
P67653 4.94e-101 292 76 0 183 1 kdsC 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
A0A140N5J7 4.94e-101 292 76 0 183 1 kdsC 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC Escherichia coli (strain B / BL21-DE3)
Q8Z3G5 6.43e-101 291 75 0 183 1 kdsC 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC Salmonella typhi
Q8ZLS0 8.09e-101 291 75 0 183 3 kdsC 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P45314 1.21e-37 130 41 3 170 1 HI_1679 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q8A712 2.3e-25 99 36 0 150 1 BT_1713 2-keto-3-deoxy-D-glycero-D-galacto-9-phosphonononic acid phosphatase Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / JCM 5827 / CCUG 10774 / NCTC 10582 / VPI-5482 / E50)
Q5R6R5 5.98e-22 95 34 1 163 2 CMAS N-acylneuraminate cytidylyltransferase Pongo abelii
Q8NFW8 1.1e-21 94 34 1 163 1 CMAS N-acylneuraminate cytidylyltransferase Homo sapiens
P69060 1.89e-21 93 34 1 163 2 Cmas N-acylneuraminate cytidylyltransferase Rattus norvegicus
Q99KK2 3.76e-21 92 34 1 163 1 Cmas N-acylneuraminate cytidylyltransferase Mus musculus
Q0E671 6.3e-19 86 37 1 160 1 cmasa N-acylneuraminate cytidylyltransferase A Danio rerio
H9BFW7 1.79e-18 85 33 2 164 1 cmasb N-acylneuraminate cytidylyltransferase B Danio rerio
Q3SZM5 1.88e-17 82 33 1 160 2 CMAS N-acylneuraminate cytidylyltransferase Bos taurus
Q90WG6 4.92e-17 81 35 1 163 2 cmas N-acylneuraminate cytidylyltransferase Oncorhynchus mykiss
A3DNN7 3.51e-07 52 37 1 81 3 Smar_1152 Phosphoglycolate phosphatase Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / JCM 9404 / F1)
Q5XAQ1 3.72e-05 46 30 1 109 1 M6_Spy1377 Putative bifunctional phosphatase/peptidyl-prolyl cis-trans isomerase Streptococcus pyogenes serotype M6 (strain ATCC BAA-946 / MGAS10394)
C6A1L0 0.000235 43 35 0 80 3 TSIB_0439 Phosphoglycolate phosphatase Thermococcus sibiricus (strain DSM 12597 / MM 739)
P95967 0.000527 42 43 1 60 3 SSO0094 Phosphoglycolate phosphatase 1 Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2)
Q8U111 0.000566 42 39 0 61 3 PF1419 Phosphoglycolate phosphatase Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
O27143 0.001 42 36 1 79 3 MTH_1071 Phosphoglycolate phosphatase Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS11690
Feature type CDS
Gene kdsC
Product 3-deoxy-manno-octulosonate-8-phosphatase KdsC
Location 487891 - 488454 (strand: -1)
Length 564 (nucleotides) / 187 (amino acids)

Contig

Accession term accessions NZ_VXKB01000002 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 573139 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_731
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF08282 haloacid dehalogenase-like hydrolase

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1778 Cell wall/membrane/envelope biogenesis (M)
General function prediction only (R)		 MR 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC and related HAD superfamily phosphatases

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03270 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] Lipopolysaccharide biosynthesis
Metabolic pathways
Biosynthesis of nucleotide sugars		 CMP-KDO biosynthesis

Protein Sequence

MTQNATVATCYGAIKQTVIEKAAKIRLLICDVDGVMSDGLIYMGNNGEELKAFNVRDGYGIRCLLTSGVEVAIITGRKAKLLADRAITLGITHLYQGQSDKLLAYRELLDKLVLRPEEVAYIGDDLIDWPVMAEVGLSVAVADAHPVLLPKADYITQIAGGRGAVRELCDLILLAQDKLDDAKGLSI

Flanking regions ( +/- flanking 50bp)

TGCTGCACATGCACGATTTACTTCATGCCGGCGTCGTATAAGGATTTGTCATGACACAAAATGCCACTGTCGCCACCTGCTATGGCGCGATAAAGCAAACCGTGATAGAAAAAGCCGCTAAAATACGCCTGCTTATTTGCGATGTTGACGGCGTGATGTCTGACGGGCTCATTTATATGGGTAATAACGGGGAAGAGCTGAAAGCGTTCAACGTCCGCGACGGGTATGGGATCCGTTGCCTGCTCACCTCCGGTGTGGAAGTGGCGATAATTACCGGTCGTAAAGCCAAATTACTGGCAGATCGTGCCATTACACTTGGAATTACACATCTTTACCAGGGGCAGAGTGATAAGCTTTTGGCGTATCGTGAACTATTAGATAAACTGGTACTCCGCCCGGAAGAAGTGGCGTATATCGGTGATGATCTGATCGACTGGCCGGTCATGGCAGAAGTCGGGTTATCTGTCGCCGTCGCTGATGCACACCCTGTATTATTACCGAAAGCGGATTATATTACACAGATTGCAGGCGGACGGGGTGCGGTCCGCGAATTATGCGATCTTATTTTGCTGGCACAAGATAAACTGGATGACGCCAAAGGCTTGTCCATCTGAATAATAATTCATTGATTACACTGGCTTTACCAAGGAATTCATGAGTAAAT