Homologs in group_731

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_03230 FBDBKF_03230 75.7 Morganella morganii S1 kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC
EHELCC_07305 EHELCC_07305 75.7 Morganella morganii S2 kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC
NLDBIP_07630 NLDBIP_07630 75.7 Morganella morganii S4 kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC
LHKJJB_07165 LHKJJB_07165 75.7 Morganella morganii S3 kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC
HKOGLL_03765 HKOGLL_03765 75.7 Morganella morganii S5 kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC
F4V73_RS11690 F4V73_RS11690 76.8 Morganella psychrotolerans kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC

Distribution of the homologs in the orthogroup group_731

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_731

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q8Z3G5 5.21e-101 291 76 0 181 1 kdsC 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC Salmonella typhi
Q8ZLS0 7.81e-101 291 76 0 181 3 kdsC 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P67654 4.37e-100 289 76 0 181 3 kdsC 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC Shigella flexneri
P67653 4.37e-100 289 76 0 181 1 kdsC 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
A0A140N5J7 4.37e-100 289 76 0 181 1 kdsC 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC Escherichia coli (strain B / BL21-DE3)
P0ABZ4 2.23e-99 288 76 0 181 3 kdsC 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC Escherichia coli (strain K12)
P0ABZ5 2.23e-99 288 76 0 181 3 kdsC 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC Escherichia coli O157:H7
Q8ZB47 8.22e-98 283 76 0 181 1 kdsC 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC Yersinia pestis
P45314 1.75e-41 140 42 1 171 1 HI_1679 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q8A712 8.79e-27 102 35 0 151 1 BT_1713 2-keto-3-deoxy-D-glycero-D-galacto-9-phosphonononic acid phosphatase Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / JCM 5827 / CCUG 10774 / NCTC 10582 / VPI-5482 / E50)
Q5R6R5 6.77e-18 83 31 3 170 2 CMAS N-acylneuraminate cytidylyltransferase Pongo abelii
P69060 9.47e-18 83 30 2 161 2 Cmas N-acylneuraminate cytidylyltransferase Rattus norvegicus
Q0E671 1.06e-17 82 34 3 156 1 cmasa N-acylneuraminate cytidylyltransferase A Danio rerio
Q8NFW8 1.15e-17 82 31 3 170 1 CMAS N-acylneuraminate cytidylyltransferase Homo sapiens
Q99KK2 2.01e-17 82 30 2 161 1 Cmas N-acylneuraminate cytidylyltransferase Mus musculus
Q90WG6 3.44e-17 81 31 3 175 2 cmas N-acylneuraminate cytidylyltransferase Oncorhynchus mykiss
H9BFW7 4.14e-17 81 34 2 153 1 cmasb N-acylneuraminate cytidylyltransferase B Danio rerio
Q3SZM5 1.99e-14 73 30 3 170 2 CMAS N-acylneuraminate cytidylyltransferase Bos taurus
Q5XAQ1 1.56e-06 50 36 0 75 1 M6_Spy1377 Putative bifunctional phosphatase/peptidyl-prolyl cis-trans isomerase Streptococcus pyogenes serotype M6 (strain ATCC BAA-946 / MGAS10394)
O27143 4.22e-05 45 37 1 79 3 MTH_1071 Phosphoglycolate phosphatase Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H)
O50129 0.00024 43 34 0 73 1 PH1421 Phosphoglycolate phosphatase Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
Q5JDB7 0.000456 43 38 1 84 3 TK2301 Phosphoglycolate phosphatase Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1)
P95967 0.000489 42 42 1 57 3 SSO0094 Phosphoglycolate phosphatase 1 Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2)
A3DNN7 0.00061 42 34 1 70 3 Smar_1152 Phosphoglycolate phosphatase Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / JCM 9404 / F1)
Q9V0Q4 0.00067 42 31 0 76 3 PYRAB07350 Phosphoglycolate phosphatase Pyrococcus abyssi (strain GE5 / Orsay)
Q8U111 0.000835 42 31 0 73 3 PF1419 Phosphoglycolate phosphatase Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS18170
Feature type CDS
Gene kdsC
Product 3-deoxy-manno-octulosonate-8-phosphatase KdsC
Location 3988663 - 3989220 (strand: -1)
Length 558 (nucleotides) / 185 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_731
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF08282 haloacid dehalogenase-like hydrolase

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1778 Cell wall/membrane/envelope biogenesis (M)
General function prediction only (R)		 MR 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC and related HAD superfamily phosphatases

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03270 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] Lipopolysaccharide biosynthesis
Metabolic pathways
Biosynthesis of nucleotide sugars		 CMP-KDO biosynthesis

Protein Sequence

MNTMIETCYGAVSKQIMQKAEKVQLLICDVDGVMSDGLIYMGNNGEELKAFNVRDGYGIRCLLTSGIEVAIITGRQSKLLEDRAKTLGITYLYQGQHNKLLAYQQLLDTLNLKPEQTAYIGDDLIDLPVMEKVGLSVAVADAHPLLTPRADYVTHILGGRGAVRELCDLILLAQGRLEEAKGLSI

Flanking regions ( +/- flanking 50bp)

TATTGCAAGCTGGGGTTGTTTAAGCTTGTTATGCGTTCATAAGGATAAAGATGAATACAATGATAGAGACCTGCTACGGTGCAGTAAGCAAGCAAATAATGCAAAAAGCAGAAAAAGTCCAATTGCTGATTTGCGATGTTGATGGTGTGATGTCTGACGGACTTATTTATATGGGCAATAACGGTGAAGAGTTGAAAGCGTTTAATGTCCGTGATGGCTATGGCATTCGTTGTTTACTTACATCGGGTATTGAGGTCGCTATCATTACGGGTCGTCAATCTAAGCTTTTAGAAGATAGAGCCAAAACACTTGGCATTACATATCTTTACCAAGGACAGCATAATAAGCTTTTGGCGTATCAACAACTGTTAGATACACTAAACCTTAAACCAGAACAGACAGCCTATATTGGCGATGATCTGATTGATTTACCGGTAATGGAAAAAGTAGGACTGTCAGTTGCCGTTGCTGATGCCCATCCATTACTCACACCTCGTGCCGACTATGTTACCCATATTTTAGGTGGACGCGGTGCAGTACGAGAATTATGTGATTTGATCCTATTAGCCCAAGGTCGACTTGAAGAAGCTAAAGGTTTATCGATTTAAACGTATAACGACACAGAATGAATAAATTAAAATCCTGGTTTACCCTGATT