Homologs in group_803

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_03230 FBDBKF_03230 100.0 Morganella morganii S1 kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC
EHELCC_07305 EHELCC_07305 100.0 Morganella morganii S2 kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC
LHKJJB_07165 LHKJJB_07165 100.0 Morganella morganii S3 kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC
HKOGLL_03765 HKOGLL_03765 100.0 Morganella morganii S5 kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC
F4V73_RS11690 F4V73_RS11690 89.8 Morganella psychrotolerans kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC
PMI_RS18170 PMI_RS18170 75.7 Proteus mirabilis HI4320 kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC

Distribution of the homologs in the orthogroup group_803

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_803

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q8ZB47 3.3e-106 305 79 0 187 1 kdsC 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC Yersinia pestis
P67654 4.93e-99 287 74 0 183 3 kdsC 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC Shigella flexneri
P67653 4.93e-99 287 74 0 183 1 kdsC 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
A0A140N5J7 4.93e-99 287 74 0 183 1 kdsC 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC Escherichia coli (strain B / BL21-DE3)
Q8Z3G5 7.56e-99 286 74 0 182 1 kdsC 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC Salmonella typhi
Q8ZLS0 1.12e-98 286 74 0 182 3 kdsC 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0ABZ4 3.4e-98 285 74 0 183 3 kdsC 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC Escherichia coli (strain K12)
P0ABZ5 3.4e-98 285 74 0 183 3 kdsC 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC Escherichia coli O157:H7
P45314 6.68e-36 126 40 3 172 1 HI_1679 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q8A712 1.88e-25 99 36 0 150 1 BT_1713 2-keto-3-deoxy-D-glycero-D-galacto-9-phosphonononic acid phosphatase Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / JCM 5827 / CCUG 10774 / NCTC 10582 / VPI-5482 / E50)
Q5R6R5 8.6e-20 89 33 2 164 2 CMAS N-acylneuraminate cytidylyltransferase Pongo abelii
P69060 1.54e-19 88 34 2 167 2 Cmas N-acylneuraminate cytidylyltransferase Rattus norvegicus
Q8NFW8 1.62e-19 88 33 2 164 1 CMAS N-acylneuraminate cytidylyltransferase Homo sapiens
Q99KK2 3.32e-19 87 34 2 167 1 Cmas N-acylneuraminate cytidylyltransferase Mus musculus
Q0E671 4.29e-19 87 36 1 160 1 cmasa N-acylneuraminate cytidylyltransferase A Danio rerio
H9BFW7 5.59e-19 86 34 2 163 1 cmasb N-acylneuraminate cytidylyltransferase B Danio rerio
Q90WG6 4.68e-17 81 34 2 166 2 cmas N-acylneuraminate cytidylyltransferase Oncorhynchus mykiss
Q3SZM5 5.91e-16 78 32 2 161 2 CMAS N-acylneuraminate cytidylyltransferase Bos taurus
A3DNN7 8.48e-06 48 35 1 81 3 Smar_1152 Phosphoglycolate phosphatase Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / JCM 9404 / F1)
Q5XAQ1 0.000728 42 32 0 76 1 M6_Spy1377 Putative bifunctional phosphatase/peptidyl-prolyl cis-trans isomerase Streptococcus pyogenes serotype M6 (strain ATCC BAA-946 / MGAS10394)

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_07630
Feature type CDS
Gene kdsC
Product 3-deoxy-manno-octulosonate-8-phosphatase KdsC
Location 198221 - 198784 (strand: -1)
Length 564 (nucleotides) / 187 (amino acids)
In genomic island -

Contig

Accession ZDB_522
Length 269640 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_803
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF08282 haloacid dehalogenase-like hydrolase

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1778 Cell wall/membrane/envelope biogenesis (M)
General function prediction only (R)		 MR 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC and related HAD superfamily phosphatases

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03270 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] Biosynthesis of various nucleotide sugars
Metabolic pathways
Biosynthesis of nucleotide sugars		 CMP-3-deoxy-D-manno-octulosonate biosynthesis, ribulose-5P => CMP-KDO

Protein Sequence

MTQITTIDTCYGPIAQTVMEKAAKIRLLICDVDGVMSDGLIYQGNSGEELKAFNVRDGYGIRCLLTSGVEVAIITGRKAKLLEDRANTLGITHLYQGQSDKLLAYRELLDKLVLRPGEVAYIGDDLIDWPVMAEVGLSAAVADAHPLLLPKADYVTQIAGGRGAVRELCDLILLAQNKLDAARGLSV

Flanking regions ( +/- flanking 50bp)

TACTGCATATGCATGATCTGCTCCAGGCCGGAGTGGTGTAAGGACTGACGATGACACAAATTACCACTATTGACACCTGCTATGGCCCGATAGCGCAAACAGTTATGGAAAAAGCCGCTAAAATACGGCTTCTTATCTGTGATGTGGACGGCGTGATGTCTGACGGCCTGATTTATCAGGGCAACAGCGGTGAAGAACTGAAAGCATTTAATGTCCGTGACGGCTACGGTATCCGCTGCCTGCTGACCTCCGGGGTGGAGGTGGCGATAATTACCGGTCGTAAAGCCAAATTGCTGGAAGATCGTGCCAATACACTCGGAATTACACATCTTTACCAGGGACAGAGCGATAAGCTTTTGGCGTATCGCGAACTATTAGATAAACTGGTACTTCGCCCCGGCGAAGTCGCCTATATCGGCGATGACCTGATTGACTGGCCGGTCATGGCAGAGGTCGGTTTATCCGCCGCAGTGGCGGATGCCCACCCGTTATTGTTACCCAAAGCGGATTATGTTACACAGATTGCAGGCGGCCGCGGGGCTGTCCGCGAATTGTGCGATCTGATTCTGCTGGCACAAAATAAGCTGGATGCGGCCAGAGGCCTGTCCGTCTGAAGAGAATTTCATTGGTTATAATGGCTTTATCAGGGATCTCATGAGTAAAT