Homologs in group_762

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_03455 FBDBKF_03455 27.6 Morganella morganii S1 tPR TPR repeat
EHELCC_07080 EHELCC_07080 27.6 Morganella morganii S2 tPR TPR repeat
NLDBIP_07405 NLDBIP_07405 27.6 Morganella morganii S4 tPR TPR repeat
LHKJJB_06940 LHKJJB_06940 27.6 Morganella morganii S3 tPR TPR repeat
HKOGLL_03990 HKOGLL_03990 27.6 Morganella morganii S5 tPR TPR repeat
F4V73_RS11440 F4V73_RS11440 32.2 Morganella psychrotolerans - tetratricopeptide repeat protein

Distribution of the homologs in the orthogroup group_762

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_762

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
A0A0H2VDN9 1.06e-08 58 27 5 197 1 esiB Secretory immunoglobulin A-binding protein EsiB Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
A0A0H2VDN9 2.3e-05 48 30 3 121 1 esiB Secretory immunoglobulin A-binding protein EsiB Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
A0A0H2VDN9 6.09e-05 47 30 8 208 1 esiB Secretory immunoglobulin A-binding protein EsiB Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P77234 1.19e-08 58 26 4 229 4 ybeQ Sel1-repeat-containing protein YbeQ Escherichia coli (strain K12)
Q9ZMJ9 1.56e-08 58 23 7 277 3 hcpE Putative beta-lactamase HcpE Helicobacter pylori (strain J99 / ATCC 700824)
Q9ZMJ9 5.45e-08 56 29 6 192 3 hcpE Putative beta-lactamase HcpE Helicobacter pylori (strain J99 / ATCC 700824)
O25021 1.14e-07 55 30 7 193 3 hcpE Putative beta-lactamase HcpE Helicobacter pylori (strain ATCC 700392 / 26695)
O25021 8.3e-07 52 21 8 277 3 hcpE Putative beta-lactamase HcpE Helicobacter pylori (strain ATCC 700392 / 26695)
Q9ZMS0 1.43e-07 55 24 4 249 3 hcpD Putative beta-lactamase HcpD Helicobacter pylori (strain J99 / ATCC 700824)
O25001 2.44e-07 53 26 3 185 1 hcpA Beta-lactamase HcpA Helicobacter pylori (strain ATCC 700392 / 26695)
Q9Z2G6 7.07e-07 53 31 4 163 1 Sel1l Protein sel-1 homolog 1 Mus musculus
Q80Z70 7.48e-07 53 31 4 163 1 Sel1l Protein sel-1 homolog 1 Rattus norvegicus
Q9UBV2 7.75e-07 53 31 4 163 1 SEL1L Protein sel-1 homolog 1 Homo sapiens
Q9UBV2 0.000191 46 23 5 248 1 SEL1L Protein sel-1 homolog 1 Homo sapiens
Q6IND7 1.23e-06 52 31 3 132 2 lrp2bp LRP2-binding protein Xenopus laevis
Q9ZMM1 3.3e-06 50 25 3 188 3 hcpA Beta-lactamase HcpA Helicobacter pylori (strain J99 / ATCC 700824)
O25728 8.6e-06 49 23 3 214 1 hcpC Putative beta-lactamase HcpC Helicobacter pylori (strain ATCC 700392 / 26695)
Q9ZKB5 9.09e-06 49 23 3 214 3 hcpC Putative beta-lactamase HcpC Helicobacter pylori (strain J99 / ATCC 700824)
P77296 9.5e-06 48 32 0 83 2 ybeT Sel1-repeat-containing protein YbeT Escherichia coli (strain K12)
O24968 1.64e-05 48 24 6 252 1 hcpD Putative beta-lactamase HcpD Helicobacter pylori (strain ATCC 700392 / 26695)
P34226 3.04e-05 48 25 7 213 1 SKT5 Chitin synthase regulator SKT5 Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Q9JZ25 0.00018 45 27 1 107 1 NMB1327 Uncharacterized protein NMB1327 Neisseria meningitidis serogroup B (strain ATCC BAA-335 / MC58)
Q569C2 0.000237 45 28 3 132 2 Lrp2bp LRP2-binding protein Rattus norvegicus
Q9D4C6 0.000274 45 27 3 132 2 Lrp2bp LRP2-binding protein Mus musculus
Q9USV0 0.000443 45 39 1 64 3 SPBC28F2.08c Putative ERAD-associated E3 ubiquitin-protein ligase component Schizosaccharomyces pombe (strain 972 / ATCC 24843)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS11450
Feature type CDS
Gene -
Product tetratricopeptide repeat protein
Location 432933 - 433709 (strand: 1)
Length 777 (nucleotides) / 258 (amino acids)

Contig

Accession term accessions NZ_VXKB01000002 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 573139 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_762
Orthogroup size 7
N. genomes 6

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Genomic region

Domains

PF08238 Sel1 repeat

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0790 General function prediction only (R) R TPR repeat

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K07126 uncharacterized protein - -

Protein Sequence

MKNLSAIVSIFISLLFIPPALAEKNYDWADALLADSTGRITPPDYRAIRVLFQQSLDTGYIPANGKLGDIYQYGYGVKPSPEKAFGYYQAGAAGRDAYSMFRLGVAYEEGAGTQEDVVKGRQYINDALAIFLQQAAGGDAQSQFFVGMQYIAGRYLPQSDKNALALFLKAAEQNHRPSLLVMGKYYNSEVDDIGQATEYYNKAIVQGEFQAYVDLGAYYFYIDPEKSHDYFQKGCDHDIALACKNLTAVDEYIAKRAE

Flanking regions ( +/- flanking 50bp)

GTTGTCCGGGTGATTAATGTATTATTAAAGGTTGTACAGGGACAGTAAATATGAAAAATCTTAGTGCTATAGTAAGTATATTTATTTCACTGCTATTTATTCCACCTGCATTGGCAGAAAAAAATTATGATTGGGCTGATGCCTTATTAGCGGATTCAACCGGACGTATTACACCGCCGGATTACCGGGCTATCCGTGTTTTATTTCAGCAGTCCCTTGATACCGGCTATATTCCGGCAAACGGAAAGTTAGGGGATATTTATCAGTATGGCTATGGTGTGAAACCCTCACCGGAAAAAGCCTTTGGCTACTATCAGGCTGGCGCTGCCGGTCGTGATGCGTATTCGATGTTTCGTCTGGGTGTGGCGTATGAAGAGGGTGCCGGTACACAAGAGGATGTGGTGAAAGGTCGTCAGTATATCAATGATGCGCTAGCTATTTTTCTGCAACAGGCAGCCGGCGGCGATGCACAGTCACAGTTTTTTGTCGGCATGCAATATATCGCCGGACGGTATTTGCCGCAGAGTGATAAAAATGCACTGGCGCTATTTTTAAAAGCAGCAGAGCAAAACCATCGTCCGAGCCTTCTTGTCATGGGAAAGTATTATAATTCTGAAGTGGACGATATAGGTCAGGCAACGGAATATTATAATAAAGCTATCGTGCAGGGTGAGTTTCAGGCGTATGTGGATCTCGGTGCTTATTATTTTTATATCGATCCGGAAAAGAGCCATGATTATTTTCAGAAAGGGTGCGATCACGATATCGCTCTGGCCTGTAAAAACCTGACTGCGGTTGACGAGTATATTGCCAAACGCGCTGAATAATAAGGATTTTCCCCCGTCATTCTGAACCGCCCGGTATATGCTTACCGGGC