Homologs in group_762

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_03455 FBDBKF_03455 74.3 Morganella morganii S1 tPR TPR repeat
EHELCC_07080 EHELCC_07080 74.3 Morganella morganii S2 tPR TPR repeat
NLDBIP_07405 NLDBIP_07405 74.3 Morganella morganii S4 tPR TPR repeat
LHKJJB_06940 LHKJJB_06940 74.3 Morganella morganii S3 tPR TPR repeat
HKOGLL_03990 HKOGLL_03990 74.3 Morganella morganii S5 tPR TPR repeat
F4V73_RS11450 F4V73_RS11450 32.2 Morganella psychrotolerans - tetratricopeptide repeat protein

Distribution of the homologs in the orthogroup group_762

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_762

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
A0A0H2VDN9 4.28e-26 110 33 4 254 1 esiB Secretory immunoglobulin A-binding protein EsiB Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
A0A0H2VDN9 8.06e-15 77 37 5 178 1 esiB Secretory immunoglobulin A-binding protein EsiB Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
A0A0H2VDN9 1.64e-12 70 30 5 243 1 esiB Secretory immunoglobulin A-binding protein EsiB Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
A0A0H2VDN9 4.78e-11 66 27 11 276 1 esiB Secretory immunoglobulin A-binding protein EsiB Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P77234 2.91e-17 83 30 5 239 4 ybeQ Sel1-repeat-containing protein YbeQ Escherichia coli (strain K12)
P77234 5.25e-17 82 31 7 242 4 ybeQ Sel1-repeat-containing protein YbeQ Escherichia coli (strain K12)
P77234 2.76e-11 66 29 3 174 4 ybeQ Sel1-repeat-containing protein YbeQ Escherichia coli (strain K12)
P77234 3.1e-08 57 32 3 157 4 ybeQ Sel1-repeat-containing protein YbeQ Escherichia coli (strain K12)
Q5TEA6 1.9e-16 82 32 6 217 1 SEL1L2 Protein sel-1 homolog 2 Homo sapiens
Q3V172 1.93e-15 79 31 6 217 2 Sel1l2 Protein sel-1 homolog 2 Mus musculus
P77296 1.12e-14 73 38 1 117 2 ybeT Sel1-repeat-containing protein YbeT Escherichia coli (strain K12)
P77296 1.62e-11 65 30 3 150 2 ybeT Sel1-repeat-containing protein YbeT Escherichia coli (strain K12)
P77296 6.97e-09 57 35 2 99 2 ybeT Sel1-repeat-containing protein YbeT Escherichia coli (strain K12)
P77296 3.9e-08 55 28 4 151 2 ybeT Sel1-repeat-containing protein YbeT Escherichia coli (strain K12)
Q9UBV2 1.43e-14 77 29 6 244 1 SEL1L Protein sel-1 homolog 1 Homo sapiens
Q9UBV2 0.000379 45 29 5 143 1 SEL1L Protein sel-1 homolog 1 Homo sapiens
Q9ESM7 1.58e-14 77 28 6 244 2 Sel1l Protein sel-1 homolog 1 Mesocricetus auratus
Q9ESM7 0.000537 45 30 3 109 2 Sel1l Protein sel-1 homolog 1 Mesocricetus auratus
Q5XI05 2.19e-14 76 31 6 217 2 Sel1l2 Protein sel-1 homolog 2 Rattus norvegicus
Q5XI05 8.31e-09 59 28 5 218 2 Sel1l2 Protein sel-1 homolog 2 Rattus norvegicus
Q9LM25 4.14e-14 75 29 3 190 1 HRD3A ERAD-associated E3 ubiquitin-protein ligase component HRD3A Arabidopsis thaliana
Q9LM25 1.06e-08 59 28 0 125 1 HRD3A ERAD-associated E3 ubiquitin-protein ligase component HRD3A Arabidopsis thaliana
Q80Z70 1.29e-13 74 28 6 244 1 Sel1l Protein sel-1 homolog 1 Rattus norvegicus
Q80Z70 0.000556 45 30 3 109 1 Sel1l Protein sel-1 homolog 1 Rattus norvegicus
Q9Z2G6 1.55e-13 73 28 6 238 1 Sel1l Protein sel-1 homolog 1 Mus musculus
Q9Z2G6 0.000608 44 30 3 109 1 Sel1l Protein sel-1 homolog 1 Mus musculus
Q10NT7 1.31e-12 71 31 2 177 2 HRD3 ERAD-associated E3 ubiquitin-protein ligase component HRD3 Oryza sativa subsp. japonica
Q10NT7 1.51e-10 65 30 0 136 2 HRD3 ERAD-associated E3 ubiquitin-protein ligase component HRD3 Oryza sativa subsp. japonica
Q5UP92 1.24e-11 68 29 7 230 4 MIMI_L18 Putative sel1-like repeat-containing protein L18 Acanthamoeba polyphaga mimivirus
Q5UP92 1.8e-10 64 33 4 166 4 MIMI_L18 Putative sel1-like repeat-containing protein L18 Acanthamoeba polyphaga mimivirus
Q5UP92 1.22e-09 62 29 6 195 4 MIMI_L18 Putative sel1-like repeat-containing protein L18 Acanthamoeba polyphaga mimivirus
O24968 4.28e-10 62 23 2 208 1 hcpD Putative beta-lactamase HcpD Helicobacter pylori (strain ATCC 700392 / 26695)
O24968 3.5e-06 51 21 2 182 1 hcpD Putative beta-lactamase HcpD Helicobacter pylori (strain ATCC 700392 / 26695)
O25728 1.83e-09 60 26 4 217 1 hcpC Putative beta-lactamase HcpC Helicobacter pylori (strain ATCC 700392 / 26695)
O25728 2.19e-09 60 26 1 143 1 hcpC Putative beta-lactamase HcpC Helicobacter pylori (strain ATCC 700392 / 26695)
O25728 8.97e-09 58 24 4 214 1 hcpC Putative beta-lactamase HcpC Helicobacter pylori (strain ATCC 700392 / 26695)
Q9ZKB5 2e-09 60 26 1 143 3 hcpC Putative beta-lactamase HcpC Helicobacter pylori (strain J99 / ATCC 700824)
Q9ZKB5 7.94e-09 58 25 4 208 3 hcpC Putative beta-lactamase HcpC Helicobacter pylori (strain J99 / ATCC 700824)
Q9ZKB5 8.17e-09 58 25 4 217 3 hcpC Putative beta-lactamase HcpC Helicobacter pylori (strain J99 / ATCC 700824)
Q9ZKB5 1.53e-06 52 24 2 201 3 hcpC Putative beta-lactamase HcpC Helicobacter pylori (strain J99 / ATCC 700824)
Q9C6B6 5.4e-09 60 34 3 123 3 HRD3B ERAD-associated E3 ubiquitin-protein ligase component HRD3B Arabidopsis thaliana
Q9C6B6 2.95e-06 52 24 6 227 3 HRD3B ERAD-associated E3 ubiquitin-protein ligase component HRD3B Arabidopsis thaliana
Q80TS8 3.82e-08 57 28 7 198 2 Sel1l3 Protein sel-1 homolog 3 Mus musculus
J9VSG5 8.46e-08 56 28 3 174 3 CSR2 Chitin synthase regulator 2 Cryptococcus neoformans var. grubii serotype A (strain H99 / ATCC 208821 / CBS 10515 / FGSC 9487)
Q9ZMS0 8.5e-08 55 23 2 182 3 hcpD Putative beta-lactamase HcpD Helicobacter pylori (strain J99 / ATCC 700824)
Q9ZMS0 5.35e-07 53 20 2 217 3 hcpD Putative beta-lactamase HcpD Helicobacter pylori (strain J99 / ATCC 700824)
Q9ZMS0 7.95e-07 53 21 2 217 3 hcpD Putative beta-lactamase HcpD Helicobacter pylori (strain J99 / ATCC 700824)
B8GXA0 1.36e-07 56 34 2 103 2 podJ Localization factor PodJL Caulobacter vibrioides (strain NA1000 / CB15N)
Q9ZG88 1.36e-07 56 34 2 103 1 podJ Localization factor PodJL Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15)
Q68CR1 1.73e-07 55 28 7 197 1 SEL1L3 Protein sel-1 homolog 3 Homo sapiens
Q94C27 3.35e-07 54 28 4 167 2 At1g70590 F-box protein At1g70590 Arabidopsis thaliana
Q94C27 2.74e-05 48 25 3 162 2 At1g70590 F-box protein At1g70590 Arabidopsis thaliana
Q09897 8.34e-07 53 36 1 93 1 chr3 Chitin synthase regulatory factor 3 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Q5UP97 1.14e-06 53 27 4 184 4 MIMI_L21 Putative sel1-like repeat-containing protein L21 Acanthamoeba polyphaga mimivirus
P9WEM4 1.5e-06 53 30 3 113 3 SKT5 Chitin synthase regulator SKT5 Malassezia restricta (strain ATCC 96810 / NBRC 103918 / CBS 7877)
Q9JZ25 1.67e-06 52 37 0 75 1 NMB1327 Uncharacterized protein NMB1327 Neisseria meningitidis serogroup B (strain ATCC BAA-335 / MC58)
Q9JZ25 4.06e-05 48 28 4 149 1 NMB1327 Uncharacterized protein NMB1327 Neisseria meningitidis serogroup B (strain ATCC BAA-335 / MC58)
Q9JZ25 0.000425 45 24 5 262 1 NMB1327 Uncharacterized protein NMB1327 Neisseria meningitidis serogroup B (strain ATCC BAA-335 / MC58)
O25001 3.2e-06 50 26 1 133 1 hcpA Beta-lactamase HcpA Helicobacter pylori (strain ATCC 700392 / 26695)
O25001 1.02e-05 49 22 5 230 1 hcpA Beta-lactamase HcpA Helicobacter pylori (strain ATCC 700392 / 26695)
Q9ZMM1 8.41e-06 49 22 5 230 3 hcpA Beta-lactamase HcpA Helicobacter pylori (strain J99 / ATCC 700824)
P0AF58 9.42e-06 49 27 3 191 3 yjcO Uncharacterized protein YjcO Shigella flexneri
P0AF56 9.42e-06 49 27 3 191 3 yjcO Sel1-repeat-containing protein YjcO Escherichia coli (strain K12)
P0AF57 9.42e-06 49 27 3 191 3 yjcO Uncharacterized protein YjcO Escherichia coli O157:H7
Q9ZMJ9 1.96e-05 48 22 2 211 3 hcpE Putative beta-lactamase HcpE Helicobacter pylori (strain J99 / ATCC 700824)
Q9ZMJ9 0.000631 44 23 7 232 3 hcpE Putative beta-lactamase HcpE Helicobacter pylori (strain J99 / ATCC 700824)
O25021 3.86e-05 48 22 2 211 3 hcpE Putative beta-lactamase HcpE Helicobacter pylori (strain ATCC 700392 / 26695)
O25021 0.000164 46 27 2 133 3 hcpE Putative beta-lactamase HcpE Helicobacter pylori (strain ATCC 700392 / 26695)
Q5UQH0 7.89e-05 47 28 1 125 4 MIMI_R815 Putative sel1-like repeat-containing protein R815 Acanthamoeba polyphaga mimivirus
Q5UQH0 0.000643 44 27 3 118 4 MIMI_R815 Putative sel1-like repeat-containing protein R815 Acanthamoeba polyphaga mimivirus
P44277 0.000341 43 36 1 88 4 HI_1625 Uncharacterized protein HI_1625 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q66KY0 0.00046 44 27 4 126 2 coa7-a Cytochrome c oxidase assembly factor 7A Xenopus laevis

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS11440
Feature type CDS
Gene -
Product tetratricopeptide repeat protein
Location 430934 - 431773 (strand: -1)
Length 840 (nucleotides) / 279 (amino acids)

Contig

Accession term accessions NZ_VXKB01000002 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 573139 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_762
Orthogroup size 7
N. genomes 6

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Genomic region

Domains

PF08238 Sel1 repeat

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0790 General function prediction only (R) R TPR repeat

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K07126 uncharacterized protein - -

Protein Sequence

MRIAIAAGLCCTVLFFTSPLMALPSPVKRQEAAALSGNITAQIKLADDYLAQKETVQAEYWFRKAAEQNNPYAQNSLGKLLLLTDQSPDSLMQAKVWFEKAATQQYAPAQTNLGNVYLHLADLNDKKNNNIVHARYWFEKAARQNVAVAQYQLGTMYLHAWGVKQDISKARTWFEKAAAQDQPDALYQLGVMYYGGKGCEGNNCAIARHFYEKAALQSHGAAQFYLSMMYLQGHGVAQDYDKGVSLMQASCDNGEQEACPWAKNLTEDGDKFRQIFSVK

Flanking regions ( +/- flanking 50bp)

TATAAGTTGCCCTACATATACCCGTTCATAAAATGCTTATGGAATGTGCAATGAGAATCGCTATCGCAGCAGGATTATGTTGTACCGTACTTTTTTTTACATCCCCGCTTATGGCACTGCCGTCCCCGGTAAAACGGCAGGAAGCCGCCGCTCTGAGCGGTAATATCACCGCTCAGATAAAATTAGCTGATGATTATCTGGCACAAAAAGAGACGGTACAGGCAGAATATTGGTTCAGAAAAGCCGCAGAGCAGAATAACCCTTATGCGCAAAATTCCCTGGGTAAACTACTGCTGCTTACCGACCAGTCCCCGGATTCACTGATGCAGGCGAAAGTCTGGTTTGAAAAGGCGGCGACACAACAATATGCACCCGCACAAACCAATCTGGGCAATGTTTATCTTCATTTAGCTGATTTAAATGATAAAAAAAACAATAATATTGTACATGCCCGCTACTGGTTTGAGAAAGCGGCACGGCAAAATGTCGCCGTTGCACAATATCAGCTGGGTACGATGTATCTGCATGCCTGGGGCGTAAAACAGGATATCAGCAAAGCCAGAACCTGGTTTGAGAAAGCCGCCGCACAAGATCAGCCCGATGCGCTTTATCAGCTTGGCGTGATGTATTACGGCGGAAAAGGATGCGAAGGTAATAATTGCGCCATTGCCCGCCATTTTTATGAAAAAGCGGCACTTCAGTCACATGGTGCGGCACAGTTTTATCTTTCAATGATGTATTTGCAGGGGCACGGCGTGGCGCAGGATTATGACAAAGGCGTATCGCTGATGCAGGCATCCTGTGATAACGGTGAGCAGGAAGCCTGCCCGTGGGCGAAAAATCTGACAGAAGACGGCGATAAATTCCGTCAGATTTTTTCTGTGAAATAAGTCAGTTAACCACCCAGATAGGCGCTTCTTACGGCTTCGTTCGCCAGCAG