Homologs in group_764

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_03515 FBDBKF_03515 96.5 Morganella morganii S1 rpoH RNA polymerase sigma factor RpoH
EHELCC_07020 EHELCC_07020 96.5 Morganella morganii S2 rpoH RNA polymerase sigma factor RpoH
NLDBIP_07345 NLDBIP_07345 96.5 Morganella morganii S4 rpoH RNA polymerase sigma factor RpoH
LHKJJB_06880 LHKJJB_06880 96.5 Morganella morganii S3 rpoH RNA polymerase sigma factor RpoH
HKOGLL_04050 HKOGLL_04050 96.5 Morganella morganii S5 rpoH RNA polymerase sigma factor RpoH
PMI_RS17955 PMI_RS17955 87.6 Proteus mirabilis HI4320 rpoH RNA polymerase sigma factor RpoH

Distribution of the homologs in the orthogroup group_764

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_764

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P50509 0.0 507 85 0 284 3 rpoH RNA polymerase sigma factor RpoH Proteus mirabilis
P50510 4.86e-162 454 79 1 284 3 rpoH RNA polymerase sigma factor RpoH Serratia marcescens
P11539 2.95e-161 452 78 0 283 3 rpoH RNA polymerase sigma factor RpoH Citrobacter freundii
P0AGB3 6.02e-161 451 77 0 283 1 rpoH RNA polymerase sigma factor RpoH Escherichia coli (strain K12)
P0AGB4 6.02e-161 451 77 0 283 3 rpoH RNA polymerase sigma factor RpoH Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0AGB5 6.02e-161 451 77 0 283 3 rpoH RNA polymerase sigma factor RpoH Escherichia coli O157:H7
P50508 5.48e-155 436 77 2 285 3 rpoH RNA polymerase sigma factor RpoH Enterobacter cloacae
P44404 2.88e-152 429 73 3 282 3 rpoH RNA polymerase sigma factor RpoH Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P50511 7.34e-152 428 71 1 283 3 rpoH RNA polymerase sigma factor RpoH Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
O05385 4.82e-148 419 68 0 283 3 rpoH RNA polymerase sigma factor RpoH Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
Q8DD54 8.33e-147 416 69 2 283 3 rpoH RNA polymerase sigma factor RpoH Vibrio vulnificus (strain CMCP6)
Q8KA76 1.63e-143 407 67 1 285 3 rpoH RNA polymerase sigma factor RpoH Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
Q89B27 8.1e-140 398 66 3 284 3 rpoH RNA polymerase sigma factor RpoH Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp)
P42378 4.71e-120 348 62 2 280 3 rpoH RNA polymerase sigma factor RpoH Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q07083 9.52e-67 213 42 4 273 3 sigC RNA polymerase sigma-C factor Myxococcus xanthus
B8H3C3 9.69e-63 202 40 5 285 3 rpoH RNA polymerase sigma factor RpoH Caulobacter vibrioides (strain NA1000 / CB15N)
P0CAW9 9.69e-63 202 40 5 285 1 rpoH RNA polymerase sigma factor RpoH Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15)
Q01624 4.58e-62 201 43 7 269 3 sigB RNA polymerase sigma-B factor Stigmatella aurantiaca (strain DW4/3-1)
P50512 5.04e-61 198 42 4 274 3 rpoH RNA polymerase sigma factor RpoH Zymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4)
P50507 1.81e-56 186 36 5 291 3 rpoH RNA polymerase sigma factor RpoH Rhizobium radiobacter
P19433 2.71e-47 161 40 6 235 3 sigB RNA polymerase sigma-B factor Myxococcus xanthus
O66381 2.18e-31 123 32 11 286 3 sigA RNA polymerase sigma factor SigA Halalkalibacterium halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
Q9KI19 1.45e-30 120 32 8 271 1 rpoS RNA polymerase sigma factor RpoS Coxiella burnetii (strain RSA 493 / Nine Mile phase I)
P52328 1.27e-29 118 31 11 275 3 sigA RNA polymerase sigma factor SigA Bacillus sp.
O33662 4.05e-29 117 31 7 276 3 sigA RNA polymerase sigma factor SigA Streptococcus mutans serotype c (strain ATCC 700610 / UA159)
Q92BQ6 1.09e-28 115 29 8 282 3 sigA RNA polymerase sigma factor SigA Listeria innocua serovar 6a (strain ATCC BAA-680 / CLIP 11262)
P52331 1.13e-28 115 29 8 282 3 sigA RNA polymerase sigma factor SigA Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e)
P0A4J0 1.2e-28 115 30 7 276 3 sigA RNA polymerase sigma factor SigA Streptococcus pneumoniae (strain ATCC BAA-255 / R6)
P0A4I9 1.2e-28 115 30 7 276 3 sigA RNA polymerase sigma factor SigA Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)
P52329 3.68e-28 114 30 10 278 3 sigA RNA polymerase sigma factor SigA Enterococcus faecalis (strain ATCC 700802 / V583)
P06224 4.01e-28 114 29 8 282 1 sigA RNA polymerase sigma factor SigA Bacillus subtilis (strain 168)
P45684 2.71e-27 111 29 8 279 1 rpoS RNA polymerase sigma factor RpoS Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P9WGI1 2.72e-27 114 29 9 306 1 sigA RNA polymerase sigma factor SigA Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WGI0 2.72e-27 114 29 9 306 3 sigA RNA polymerase sigma factor SigA Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P0A603 2.72e-27 114 29 9 306 3 sigA RNA polymerase sigma factor SigA Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
Q9ZMY3 2.96e-27 114 32 11 287 3 rpoD RNA polymerase sigma factor RpoD Helicobacter pylori (strain J99 / ATCC 700824)
P58290 3.06e-27 111 30 9 278 3 sigA RNA polymerase sigma factor SigA (Fragment) Lactococcus lactis subsp. cremoris
P0A0I9 4.6e-27 111 28 7 279 3 sigA RNA polymerase sigma factor SigA Staphylococcus aureus (strain MW2)
Q6G905 4.6e-27 111 28 7 279 3 sigA RNA polymerase sigma factor SigA Staphylococcus aureus (strain MSSA476)
Q6GGD8 4.6e-27 111 28 7 279 3 sigA RNA polymerase sigma factor SigA Staphylococcus aureus (strain MRSA252)
P0A0I8 4.6e-27 111 28 7 279 3 sigA RNA polymerase sigma factor SigA Staphylococcus aureus (strain Mu50 / ATCC 700699)
Q5HFJ9 4.6e-27 111 28 7 279 3 sigA RNA polymerase sigma factor SigA Staphylococcus aureus (strain COL)
P0A0J0 4.6e-27 111 28 7 279 1 sigA RNA polymerase sigma factor SigA Staphylococcus aureus (strain NCTC 8325 / PS 47)
Q99TT5 5.58e-27 110 28 7 279 1 sigA RNA polymerase sigma factor SigA Staphylococcus aureus (strain N315)
Q04506 7.83e-27 110 30 9 278 3 sigA RNA polymerase sigma factor SigA Lactococcus lactis subsp. lactis (strain IL1403)
P55993 8.19e-27 112 32 11 287 1 rpoD RNA polymerase sigma factor RpoD Helicobacter pylori (strain ATCC 700392 / 26695)
Q8CP24 8.73e-27 110 29 7 273 3 sigA RNA polymerase sigma factor SigA Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200)
Q5HNY7 8.73e-27 110 29 7 273 3 sigA RNA polymerase sigma factor SigA Staphylococcus epidermidis (strain ATCC 35984 / DSM 28319 / BCRC 17069 / CCUG 31568 / BM 3577 / RP62A)
P33118 1.72e-26 108 29 8 294 3 sigB RNA polymerase sigma factor SigB Corynebacterium diphtheriae (strain ATCC 700971 / NCTC 13129 / Biotype gravis)
P77994 2.54e-26 109 29 6 274 1 sigA RNA polymerase sigma factor SigA Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8)
P27785 2.25e-25 105 28 9 305 3 sigA RNA polymerase sigma factor SigA Kitasatospora aureofaciens
O51804 6.47e-25 104 29 6 255 3 rpoS RNA polymerase sigma factor RpoS Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
P77951 7.43e-25 106 28 7 301 1 sigA RNA polymerase sigma factor SigA Streptomyces griseus
B1VXR4 7.43e-25 106 28 7 301 2 hrdB RNA polymerase principal sigma factor HrdB Streptomyces griseus subsp. griseus (strain JCM 4626 / CBS 651.72 / NBRC 13350 / KCC S-0626 / ISP 5235)
P18183 3.09e-24 105 28 7 301 1 hrdB RNA polymerase principal sigma factor HrdB Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
Q9Z7F0 3.5e-24 105 31 6 251 3 sigA RNA polymerase sigma factor SigA Chlamydia pneumoniae
P47765 1.01e-23 101 29 6 255 3 rpoS RNA polymerase sigma factor RpoS Yersinia enterocolitica
P13445 1.56e-23 100 27 8 282 1 rpoS RNA polymerase sigma factor RpoS Escherichia coli (strain K12)
P0DM81 1.64e-23 100 27 8 282 3 rpoS RNA polymerase sigma factor RpoS Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
F5ZTT9 1.64e-23 100 27 8 282 3 rpoS RNA polymerase sigma factor RpoS Salmonella typhimurium (strain ATCC 68169 / UK-1)
P0A2E6 1.64e-23 100 27 8 282 3 rpoS RNA polymerase sigma factor RpoS Salmonella typhi
D0ZVL4 1.64e-23 100 27 8 282 1 rpoS RNA polymerase sigma factor RpoS Salmonella typhimurium (strain 14028s / SGSC 2262)
P0A2E7 1.64e-23 100 27 8 282 3 rpoS RNA polymerase sigma factor RpoS Salmonella dublin
P35540 1.76e-23 100 27 8 282 3 rpoS RNA polymerase sigma factor RpoS Shigella flexneri
P18249 2.53e-23 100 32 6 233 3 hrdD RNA polymerase principal sigma factor HrdD Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
Q60012 3.37e-23 100 32 6 233 3 hrdD RNA polymerase principal sigma factor HrdD Streptomyces viridifaciens
P18333 3.87e-23 102 30 6 243 1 sigA RNA polymerase sigma factor SigA Chlamydia trachomatis serovar D (strain ATCC VR-885 / DSM 19411 / UW-3/Cx)
P56835 4.02e-23 102 30 6 243 3 sigA RNA polymerase sigma factor SigA Chlamydia muridarum (strain MoPn / Nigg)
P9WGI5 5.11e-23 99 28 10 301 1 sigB RNA polymerase sigma factor SigB Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WGI4 5.11e-23 99 28 10 301 3 sigB RNA polymerase sigma factor SigB Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
Q9LD95 7.53e-23 101 29 8 237 1 SIGF RNA polymerase sigma factor sigF, chloroplastic Arabidopsis thaliana
P52322 2.04e-22 99 29 5 242 3 sigA RNA polymerase sigma factor SigA Microcystis aeruginosa
Q59914 4.72e-22 97 31 7 256 3 hrdD RNA polymerase principal sigma factor HrdD Streptomyces griseus
P33656 6.82e-22 97 30 9 287 3 sigA RNA polymerase sigma factor SigA Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / IAM 19013 / LMG 5710 / NBRC 13948 / NRRL B-527 / VKM B-1787 / 2291 / W)
P18184 8.65e-22 96 30 8 272 3 hrdC RNA polymerase principal sigma factor HrdC Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
P26683 1.08e-21 96 28 4 239 1 sigA RNA polymerase sigma factor SigA Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)
Q8PG33 1.13e-21 97 31 11 273 3 rpoD RNA polymerase sigma factor RpoD Xanthomonas axonopodis pv. citri (strain 306)
Q31QR8 1.36e-21 95 28 9 290 3 sigA4 RNA polymerase sigma factor SigA4 Synechococcus elongatus (strain ATCC 33912 / PCC 7942 / FACHB-805)
P74565 1.39e-21 97 28 7 247 1 sigA RNA polymerase sigma factor SigA Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
Q8P4H2 2.46e-21 97 30 11 273 3 rpoD RNA polymerase sigma factor RpoD Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25)
P38023 3.6e-21 95 28 4 239 3 sigA1 RNA polymerase sigma factor SigA1 Synechococcus elongatus (strain ATCC 33912 / PCC 7942 / FACHB-805)
P18182 9.4e-21 94 27 12 297 1 hrdA RNA polymerase principal sigma factor HrdA Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
Q9PDM9 3.02e-20 94 29 9 257 3 rpoD RNA polymerase sigma factor RpoD Xylella fastidiosa (strain 9a5c)
Q87DT7 3.16e-20 93 29 9 257 3 rpoD RNA polymerase sigma factor RpoD Xylella fastidiosa (strain Temecula1 / ATCC 700964)
P59117 3.86e-20 93 28 8 250 3 rpoD RNA polymerase sigma factor RpoD Leptospira interrogans serogroup Icterohaemorrhagiae serovar Lai (strain 56601)
P61540 3.86e-20 93 28 8 250 3 rpoD RNA polymerase sigma factor RpoD Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni (strain Fiocruz L1-130)
P43766 4.36e-20 93 29 9 242 3 rpoD RNA polymerase sigma factor RpoD Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P57163 5.75e-20 92 28 9 264 3 rpoD RNA polymerase sigma factor RpoD Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
Q83BB6 8.86e-20 92 29 8 246 1 rpoD RNA polymerase sigma factor RpoD Coxiella burnetii (strain RSA 493 / Nine Mile phase I)
P00579 8.88e-20 92 28 7 259 1 rpoD RNA polymerase sigma factor RpoD Escherichia coli (strain K12)
P0A2E3 9.07e-20 92 28 7 259 3 rpoD RNA polymerase sigma factor RpoD Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A2E4 9.07e-20 92 28 7 259 3 rpoD RNA polymerase sigma factor RpoD Salmonella typhi
P32001 9.26e-20 92 28 9 264 3 rpoD RNA polymerase sigma factor RpoD Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
P52325 1.33e-19 92 28 7 259 3 rpoD RNA polymerase sigma factor RpoD Neisseria gonorrhoeae
O83506 1.49e-19 91 28 7 240 3 rpoD RNA polymerase sigma factor RpoD Treponema pallidum (strain Nichols)
Q9EZJ8 2.28e-19 90 28 8 259 1 sigA RNA polymerase sigma factor SigA Thermus aquaticus
Q92FZ8 2.91e-19 90 28 7 243 3 rpoD RNA polymerase sigma factor RpoD Rickettsia conorii (strain ATCC VR-613 / Malish 7)
Q4UJT1 3.2e-19 90 28 7 243 3 rpoD RNA polymerase sigma factor RpoD Rickettsia felis (strain ATCC VR-1525 / URRWXCal2)
O24744 3.79e-19 90 28 4 232 3 rpoD RNA polymerase sigma factor RpoD Shewanella violacea (strain JCM 10179 / CIP 106290 / LMG 19151 / DSS12)
P33451 3.94e-19 90 28 7 243 3 rpoD RNA polymerase sigma factor RpoD Rickettsia prowazekii (strain Madrid E)
Q68VQ5 4.37e-19 90 28 7 243 3 rpoD RNA polymerase sigma factor RpoD Rickettsia typhi (strain ATCC VR-144 / Wilmington)
Q89B10 8.81e-19 89 29 6 237 3 rpoD RNA polymerase sigma factor RpoD Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp)
P26764 1.37e-18 86 29 8 262 3 sigF RNA polymerase sigma-F factor Bacillus licheniformis
Q31QG5 1.42e-18 87 27 7 244 3 sigA3 RNA polymerase sigma factor SigA3 Synechococcus elongatus (strain ATCC 33912 / PCC 7942 / FACHB-805)
P52326 1.49e-18 89 28 6 235 3 rpoD RNA polymerase sigma factor RpoD Pseudomonas protegens (strain DSM 19095 / LMG 27888 / CFBP 6595 / CHA0)
P26480 1.5e-18 89 28 6 235 1 rpoD RNA polymerase sigma factor RpoD Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
D5AQI9 1.51e-18 89 28 7 236 3 rpoD RNA polymerase sigma factor RpoD Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003)
P52324 1.57e-18 89 28 7 235 3 rpoD RNA polymerase sigma factor RpoD Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15)
P52323 1.8e-18 88 27 9 252 3 rpoD RNA polymerase sigma factor RpoD Borreliella burgdorferi (strain ATCC 35210 / DSM 4680 / CIP 102532 / B31)
Q1RKH7 3.74e-18 87 28 7 243 3 rpoD RNA polymerase sigma factor RpoD Rickettsia bellii (strain RML369-C)
Q59996 3.79e-18 87 28 7 235 3 sigC Probable RNA polymerase sigma-C factor Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
Q59753 4.03e-18 87 28 7 234 3 rpoD RNA polymerase sigma factor RpoD Rhizobium meliloti (strain 1021)
O22056 4.24e-18 87 26 9 258 2 SIGB RNA polymerase sigma factor sigB Arabidopsis thaliana
Q2K619 4.83e-18 87 28 7 234 1 rpoD RNA polymerase sigma factor RpoD Rhizobium etli (strain ATCC 51251 / DSM 11541 / JCM 21823 / NBRC 15573 / CFN 42)
P33452 4.91e-18 87 28 7 234 3 rpoD RNA polymerase sigma factor RpoD Agrobacterium fabrum (strain C58 / ATCC 33970)
P47491 6.79e-18 86 28 9 274 3 sigA RNA polymerase sigma factor SigA Mycoplasma genitalium (strain ATCC 33530 / DSM 19775 / NCTC 10195 / G37)
P78022 7.08e-18 86 28 9 274 3 sigA RNA polymerase sigma factor SigA Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1)
P0CZ15 1.12e-17 86 27 7 236 2 rpoD RNA polymerase sigma factor RpoD Rhodobacter capsulatus
P52327 1.22e-17 86 28 6 255 3 rpoD RNA polymerase sigma factor RpoD Pseudomonas putida
P33658 1.86e-17 83 28 8 264 3 sigG RNA polymerase sigma-G factor Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / IAM 19013 / LMG 5710 / NBRC 13948 / NRRL B-527 / VKM B-1787 / 2291 / W)
Q72L95 2.35e-17 84 27 8 259 1 sigA RNA polymerase sigma factor SigA Thermus thermophilus (strain ATCC BAA-163 / DSM 7039 / HB27)
P17531 3.54e-17 84 28 7 235 3 rpoD RNA polymerase sigma factor RpoD Myxococcus xanthus
O24629 1.79e-16 82 29 9 246 1 SIGA RNA polymerase sigma factor sigA Arabidopsis thaliana
Q31ME3 2.98e-16 80 27 6 234 1 sigA2 RNA polymerase sigma factor SigA2 Synechococcus elongatus (strain ATCC 33912 / PCC 7942 / FACHB-805)
P35145 4.57e-16 79 28 8 267 3 sigF RNA polymerase sigma-F factor Priestia megaterium
P07860 1.28e-15 77 28 9 268 1 sigF RNA polymerase sigma-F factor Bacillus subtilis (strain 168)
Q0J7T6 1.4e-15 79 27 6 243 2 SIGA RNA polymerase sigma factor sigA Oryza sativa subsp. japonica
P19940 1.46e-15 77 27 7 260 1 sigG RNA polymerase sigma-G factor Bacillus subtilis (strain 168)
Q03066 1.63e-15 79 26 5 243 3 sigC RNA polymerase sigma-C factor Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)
Q03065 5.04e-15 77 25 7 241 3 sigB RNA polymerase sigma-B factor Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)
P62179 6.89e-15 75 28 9 265 1 sigE RNA polymerase sigma-35 factor Bacillus thuringiensis subsp. kurstaki
P62178 6.89e-15 75 28 9 265 3 sigE RNA polymerase sigma-35 factor Bacillus cereus (strain ATCC 14579 / DSM 31 / CCUG 7414 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NCTC 2599 / NRRL B-3711)
P62177 6.89e-15 75 28 9 265 3 sigE RNA polymerase sigma-35 factor Bacillus anthracis
P12254 4.03e-14 74 28 13 276 1 sigK RNA polymerase sigma-K factor Bacillus subtilis (strain 168)
P06222 5.04e-14 73 39 2 109 1 sigE RNA polymerase sigma-E factor Bacillus subtilis (strain 168)
Q9ZSL6 3.2e-13 72 24 5 238 2 SIGD RNA polymerase sigma factor sigD, chloroplastic Arabidopsis thaliana
P43344 4.74e-13 70 27 5 205 3 rpoD RNA polymerase sigma factor RpoD (Fragment) Serratia marcescens
P33657 8.55e-12 67 35 2 107 3 sigE RNA polymerase sigma-E factor Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / IAM 19013 / LMG 5710 / NBRC 13948 / NRRL B-527 / VKM B-1787 / 2291 / W)
P62181 1.84e-11 65 25 9 263 1 sigK RNA polymerase sigma-28 factor Bacillus thuringiensis subsp. kurstaki
P62180 1.84e-11 65 25 9 263 3 sigK RNA polymerase sigma-28 factor Bacillus cereus (strain ATCC 14579 / DSM 31 / CCUG 7414 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NCTC 2599 / NRRL B-3711)
P62182 1.84e-11 65 25 9 263 3 sigK RNA polymerase sigma-28 factor Bacillus anthracis
O24621 3.32e-11 67 26 7 251 2 SIGC RNA polymerase sigma factor sigC Arabidopsis thaliana
P9WGI3 3.37e-11 65 26 7 237 1 sigF RNA polymerase sigma factor SigF Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WGI2 3.37e-11 65 26 7 237 3 sigF RNA polymerase sigma factor SigF Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P06574 5.62e-11 65 27 10 268 1 sigB RNA polymerase sigma-B factor Bacillus subtilis (strain 168)
P37971 2.54e-09 60 25 7 232 3 sigF RNA polymerase sigma-F factor Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
P26768 2.21e-08 55 33 1 93 3 None Putative RNA polymerase sigma-G factor (Fragment) Bacillus thuringiensis subsp. kurstaki
P37970 3.6e-07 53 24 8 232 3 sigF RNA polymerase sigma-F factor Kitasatospora aureofaciens
Q9ZNX9 1.39e-06 52 25 9 251 1 SIGE RNA polymerase sigma factor sigE, chloroplastic/mitochondrial Arabidopsis thaliana
P17211 4.09e-06 50 25 11 247 3 whiG RNA polymerase sigma factor WhiG Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
P0AEM6 1.57e-05 48 26 8 212 1 fliA RNA polymerase sigma factor FliA Escherichia coli (strain K12)
P0AEM7 1.57e-05 48 26 8 212 3 fliA RNA polymerase sigma factor FliA Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0AEM8 1.57e-05 48 26 8 212 3 fliA RNA polymerase sigma factor FliA Escherichia coli O157:H7
Q9K5J6 2.52e-05 48 25 10 247 3 sigB RNA polymerase sigma-B factor Bacillus anthracis
P52621 0.000189 45 25 8 208 3 fliA RNA polymerase sigma factor FliA Yersinia enterocolitica
P17869 0.000221 45 31 2 106 1 sigH RNA polymerase sigma-H factor Bacillus subtilis (strain 168)
P0A2E8 0.00023 45 25 8 211 1 fliA RNA polymerase sigma factor FliA Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A2E9 0.00023 45 25 8 211 3 fliA RNA polymerase sigma factor FliA Salmonella typhi
P10726 0.00044 44 23 10 246 1 sigD RNA polymerase sigma-D factor Bacillus subtilis (strain 168)
P02964 0.000495 43 32 1 94 3 sigH RNA polymerase sigma-H factor Bacillus licheniformis

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS11385
Feature type CDS
Gene rpoH
Product RNA polymerase sigma factor RpoH
Location 419291 - 420145 (strand: 1)
Length 855 (nucleotides) / 284 (amino acids)

Contig

Accession term accessions NZ_VXKB01000002 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 573139 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_764
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF00140 Sigma-70 factor, region 1.2
PF04542 Sigma-70 region 2
PF04545 Sigma-70, region 4

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0568 Transcription (K) K DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03089 RNA polymerase sigma-32 factor - -

Protein Sequence

MTKDTQSLVLVPQGSIEAYVRGANQYPMLTAEEEKELAERLYYDGDLEAAKKLIMSHLRFVIHVARSYSGYGLPQADLIQEGNIGLMKAVRRFNPEMGVRLVSFAVHWIKAEIHEYVLRNWRIVKIATTKAQRKLFFNLRKSKKRLGWFNQEEVEMVAQELGVTSKDVLEMESRMAAQDMAFDMSDDDDGDHPVVAPALFLEDKSSDFADEIEEDNWDNHATDKLTMAIDTLDERSRDIIRARWLDDDSKTTLQELADKYGVSAERVRQLEKNAMKKLRLAIED

Flanking regions ( +/- flanking 50bp)

TTGTTATTATCGTCTGCCGACGTCATTTTTTTATTCATATCGAGGACTGAATGACTAAAGATACCCAATCCTTAGTATTGGTTCCGCAGGGAAGCATTGAAGCTTACGTCCGTGGAGCAAACCAGTATCCGATGCTGACGGCAGAGGAAGAGAAAGAGCTGGCTGAACGCCTCTATTATGATGGCGACCTTGAAGCTGCGAAAAAACTCATCATGTCTCACTTGCGGTTTGTCATCCATGTTGCCCGCAGTTACTCCGGGTATGGTTTGCCTCAGGCGGATCTTATCCAGGAAGGAAATATCGGGCTGATGAAAGCGGTGCGCCGCTTCAATCCGGAAATGGGCGTGCGTCTGGTGTCATTTGCGGTTCACTGGATCAAAGCGGAAATCCATGAATATGTGCTGCGTAACTGGCGTATTGTAAAAATCGCCACGACTAAAGCACAGCGTAAGTTATTCTTTAATCTGCGTAAATCTAAGAAACGTCTGGGCTGGTTTAACCAGGAAGAAGTCGAAATGGTTGCCCAGGAACTGGGGGTCACCAGCAAAGATGTGCTGGAGATGGAATCCCGTATGGCGGCGCAGGATATGGCATTTGACATGTCCGATGACGACGACGGCGATCATCCGGTTGTGGCTCCGGCGCTGTTTCTGGAGGATAAATCCTCTGATTTCGCAGATGAAATTGAAGAAGATAACTGGGATAACCACGCCACAGATAAACTCACTATGGCGATTGATACCCTTGATGAGCGCAGCCGTGATATTATCCGCGCCCGCTGGCTGGATGATGACAGCAAAACGACATTGCAGGAACTGGCTGATAAATATGGTGTTTCCGCTGAACGCGTTCGTCAGCTGGAAAAAAATGCCATGAAAAAACTGCGCCTGGCGATCGAAGATTAATCTGTAATATTCGTGTTATTTTTAAAGGCGGATTAACCGCCTTTTTCTTT