Homologs in group_155

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9 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_09020 FBDBKF_09020 86.1 Morganella morganii S1 - Fimbrial protein
EHELCC_10390 EHELCC_10390 86.1 Morganella morganii S2 - Fimbrial protein
NLDBIP_10735 NLDBIP_10735 86.1 Morganella morganii S4 - Fimbrial protein
LHKJJB_10620 LHKJJB_10620 86.1 Morganella morganii S3 - Fimbrial protein
HKOGLL_13680 HKOGLL_13680 86.1 Morganella morganii S5 - Fimbrial protein
PMI_RS01250 PMI_RS01250 55.6 Proteus mirabilis HI4320 - fimbrial protein
PMI_RS01300 PMI_RS01300 68.9 Proteus mirabilis HI4320 - fimbrial protein
PMI_RS09280 PMI_RS09280 31.0 Proteus mirabilis HI4320 - fimbrial protein
PMI_RS10925 PMI_RS10925 26.3 Proteus mirabilis HI4320 - fimbrial protein

Distribution of the homologs in the orthogroup group_155

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_155

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P76500 1.37e-22 91 34 5 157 2 yfcQ Uncharacterized fimbrial-like protein YfcQ Escherichia coli (strain K12)
P76501 4.82e-13 66 33 6 133 2 yfcR Uncharacterized fimbrial-like protein YfcR Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS10950
Feature type CDS
Gene -
Product pilus assembly protein
Location 332067 - 332573 (strand: 1)
Length 507 (nucleotides) / 168 (amino acids)

Contig

Accession term accessions NZ_VXKB01000002 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 573139 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_155
Orthogroup size 10
N. genomes 7

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Genomic region

Domains

PF00419 Fimbrial protein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3539 Cell motility (N) N Pilin (type 1 fimbrial protein)

Virulence factor Annotation(s)

VF gene ID Protein VF ID Category
VFG042626 fimbrial protein VF1233 Adherence

Protein Sequence

MMTTTNNRRFVHYLLSGLLCIAAGNVSADTPNMKLFGTLLVPPPCTISDNGMIDIYFGDNVGIHKVDGINYSRPVNYTLVCEDNIKGWDLGLSVIGPVSAFDDAALQTNITDLAIRLTQNGQPFTLNKRIAVSPDNPPVIQAVPVKRPGSTLPEGVFDVTATLLAEYQ

Flanking regions ( +/- flanking 50bp)

GATTTTGCGGCGACGGCCACGTTAGAGCTGGACTATCAGTAAGGAGCCTGATGATGACAACAACGAATAACAGGCGATTTGTGCATTACCTGCTGAGCGGATTGCTTTGTATTGCGGCAGGCAATGTCAGCGCGGATACCCCGAATATGAAACTGTTCGGCACGTTGCTGGTTCCGCCACCCTGCACCATCAGTGATAACGGCATGATCGATATCTACTTCGGGGACAATGTCGGGATCCACAAAGTGGACGGCATCAATTACAGCCGCCCGGTCAACTATACCCTGGTGTGTGAGGACAATATCAAAGGCTGGGATCTGGGGTTATCAGTCATTGGACCGGTAAGTGCCTTTGATGATGCGGCATTGCAGACCAACATCACCGATTTGGCTATCCGCCTGACACAGAACGGGCAACCTTTCACGCTGAACAAGCGCATTGCGGTTTCGCCGGATAATCCGCCGGTTATTCAGGCGGTGCCGGTAAAGCGGCCGGGCAGTACATTGCCGGAAGGCGTGTTTGATGTAACTGCCACATTACTGGCGGAATATCAGTAGGAGTGAATAAATGAAAACTGACAATCGGTGGCGGTGGCTTATCAGCGCGT