Homologs in group_1493

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_09020 FBDBKF_09020 72.4 Morganella morganii S1 - Fimbrial protein
EHELCC_10390 EHELCC_10390 72.4 Morganella morganii S2 - Fimbrial protein
NLDBIP_10735 NLDBIP_10735 72.4 Morganella morganii S4 - Fimbrial protein
LHKJJB_10620 LHKJJB_10620 72.4 Morganella morganii S3 - Fimbrial protein
HKOGLL_13680 HKOGLL_13680 72.4 Morganella morganii S5 - Fimbrial protein
F4V73_RS10950 F4V73_RS10950 68.9 Morganella psychrotolerans - pilus assembly protein

Distribution of the homologs in the orthogroup group_1493

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1493

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P76500 2.64e-27 103 35 3 163 2 yfcQ Uncharacterized fimbrial-like protein YfcQ Escherichia coli (strain K12)
P76501 7.25e-14 68 33 7 159 2 yfcR Uncharacterized fimbrial-like protein YfcR Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS01300
Feature type CDS
Gene -
Product fimbrial protein
Location 316543 - 317028 (strand: 1)
Length 486 (nucleotides) / 161 (amino acids)
In genomic island -

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1493
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF00419 Fimbrial protein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3539 Cell motility (N) N Pilin (type 1 fimbrial protein)

Virulence factor Annotation(s)

VF gene ID Protein VF ID Category
VFG042626 fimbrial protein VF1233 Adherence

Protein Sequence

MNKLQSICLIILLNSTAVMAADSPNLKLFGTLLVPPPCVISNDERIEVFFGKNVGINKVDGINYTESVNYTLVCDANLKGWDLGLSIIGPKTQFDEAALQTNIPDLGIHLTQDGKPFKLNERIAISPDSPPVIQAVPVKRPGSTLPEGAFEVSATLLAEYQ

Flanking regions ( +/- flanking 50bp)

TTGTTGCCAATGCCACACTTCATGTAGATTATCAGTAAAGGGGCAACACGATGAATAAATTGCAATCTATTTGTCTGATTATATTACTAAATTCTACAGCAGTAATGGCGGCCGACTCGCCTAATTTAAAATTATTCGGAACATTATTAGTGCCACCTCCTTGTGTTATCAGCAATGACGAACGAATTGAGGTTTTTTTTGGTAAGAACGTCGGTATTAATAAAGTTGATGGTATTAACTATACCGAATCGGTGAATTATACCTTGGTATGCGACGCTAATTTAAAAGGTTGGGATTTGGGATTATCAATTATCGGACCTAAAACCCAGTTTGATGAGGCGGCATTGCAAACCAATATTCCAGATTTAGGTATTCATTTAACTCAAGATGGTAAGCCTTTTAAGCTAAATGAGCGTATTGCGATTTCACCAGATTCGCCTCCGGTTATTCAAGCTGTTCCAGTAAAAAGACCGGGAAGTACATTGCCTGAAGGGGCATTTGAAGTCTCAGCCACCTTATTAGCAGAATACCAATAGGAGCGTTTTGATGAAAATAAAAACATTATCGATCCGGTTCATATTGGGTC