Homologs in group_1448

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_09210 FBDBKF_09210 77.0 Morganella morganii S1 fepB ABC-type Fe3+-hydroxamate transport system, periplasmic component
EHELCC_10200 EHELCC_10200 77.0 Morganella morganii S2 fepB ABC-type Fe3+-hydroxamate transport system, periplasmic component
NLDBIP_10545 NLDBIP_10545 77.0 Morganella morganii S4 fepB ABC-type Fe3+-hydroxamate transport system, periplasmic component
LHKJJB_10810 LHKJJB_10810 77.0 Morganella morganii S3 fepB ABC-type Fe3+-hydroxamate transport system, periplasmic component
HKOGLL_13870 HKOGLL_13870 77.0 Morganella morganii S5 fepB ABC-type Fe3+-hydroxamate transport system, periplasmic component
PMI_RS13180 PMI_RS13180 53.0 Proteus mirabilis HI4320 - iron ABC transporter substrate-binding protein

Distribution of the homologs in the orthogroup group_1448

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1448

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q57550 2.6e-14 76 27 13 287 3 MJ0085 Uncharacterized lipoprotein MJ0085 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
O34805 2.28e-05 49 21 10 242 3 yvrC Uncharacterized ABC transporter substrate-binding lipoprotein YvrC Bacillus subtilis (strain 168)
Q8X8Z0 0.000596 44 26 9 210 3 btuF Vitamin B12-binding protein Escherichia coli O157:H7
P44206 0.00076 44 25 9 228 1 molA Molybdate-binding protein MolA Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS10760
Feature type CDS
Gene -
Product ABC transporter substrate-binding protein
Location 282967 - 284001 (strand: -1)
Length 1035 (nucleotides) / 344 (amino acids)

Contig

Accession term accessions NZ_VXKB01000002 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 573139 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1448
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF01497 Periplasmic binding protein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0614 Inorganic ion transport and metabolism (P) P ABC-type Fe3+-hydroxamate transport system, periplasmic component

Protein Sequence

MTLSLQHPFYLSRYALLLAFLTLPFTAEAQKTISQEFSYGELPAPATITRIVSSGPPTDQLLFAVAPEKLAGFSSLFLRDEPLFAPQWRALPKLGRISGRGSTLSPESLLALAPDMIIDSGLADETYRSSASRFSRQTGIPYLLLSGNLFQTPDQLRRLGTRLGETARTEQQAQLAEKWLEDAQHFAARETHKTRFYLARGANGLQTGLRGSIHGEAPELLGFENVAEVPGMQGLADVSAEQLLQWNPDMIIAQDAVTYHAIMQGEVWQSLDAVKNKQVFYYAGLPFGWLDSPPGLNRLLGLRRLQAQSEPGSIDLKADIGLFFRLFYHSPLTEAQINTLLSAK

Flanking regions ( +/- flanking 50bp)

CTAACGCCCGCTATATAATAATAAATATAACGATAACTGACCTGATCACTATGACTCTGAGCCTACAACACCCCTTTTATCTCTCCCGCTATGCCCTGCTGCTGGCTTTTCTGACCCTGCCGTTTACAGCAGAGGCACAGAAAACCATCTCACAGGAATTCAGCTACGGTGAGTTACCCGCACCTGCGACAATCACCCGGATTGTCAGCAGCGGTCCGCCGACTGATCAATTGCTGTTTGCTGTGGCACCTGAAAAACTGGCAGGATTCTCTTCTCTTTTCCTGCGGGATGAACCCTTGTTCGCCCCGCAGTGGCGCGCATTACCAAAACTGGGGCGGATCTCCGGACGCGGCAGTACATTGTCGCCGGAAAGCCTGCTGGCACTGGCTCCGGATATGATTATTGACAGCGGTCTGGCTGATGAAACCTATCGCTCGTCAGCCAGCCGCTTCAGCCGTCAAACCGGTATTCCTTACCTTCTGTTATCCGGAAATCTGTTTCAGACGCCTGATCAGTTGCGCCGTCTTGGTACCCGGCTGGGCGAAACCGCACGGACAGAACAACAGGCGCAACTGGCTGAGAAATGGCTGGAGGATGCGCAACACTTTGCGGCGCGGGAAACACACAAGACACGCTTTTACCTTGCCCGCGGAGCAAATGGGTTACAAACCGGTTTGCGTGGTTCAATTCACGGCGAAGCCCCTGAATTACTGGGTTTTGAGAATGTCGCAGAGGTTCCGGGCATGCAGGGGCTGGCAGATGTCTCAGCGGAGCAATTATTGCAGTGGAACCCGGATATGATTATTGCGCAGGACGCGGTGACCTATCACGCCATTATGCAGGGTGAAGTCTGGCAGAGCCTGGATGCGGTGAAAAATAAGCAGGTATTTTACTATGCCGGGCTGCCGTTCGGCTGGCTCGACAGTCCGCCGGGACTGAACCGGCTGCTCGGACTGCGCCGCTTACAGGCGCAATCTGAACCGGGCAGTATCGACCTGAAAGCCGATATCGGCTTGTTTTTCCGTCTGTTTTATCACTCTCCGTTGACAGAGGCACAGATTAATACTCTGTTATCTGCCAAATGAGTATCAGTATAAAAAGTCTGTTACTGCTCCTGATATTGATCATAACTATC