Homologs in group_313

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_09295 FBDBKF_09295 79.1 Morganella morganii S1 flhB Flagellar biosynthesis protein FlhB
EHELCC_10115 EHELCC_10115 79.1 Morganella morganii S2 flhB Flagellar biosynthesis protein FlhB
NLDBIP_10460 NLDBIP_10460 79.1 Morganella morganii S4 flhB Flagellar biosynthesis protein FlhB
LHKJJB_10895 LHKJJB_10895 79.1 Morganella morganii S3 flhB Flagellar biosynthesis protein FlhB
HKOGLL_13955 HKOGLL_13955 79.1 Morganella morganii S5 flhB Flagellar biosynthesis protein FlhB
F4V73_RS08350 F4V73_RS08350 29.5 Morganella psychrotolerans - EscU/YscU/HrcU family type III secretion system export apparatus switch protein
PMI_RS13230 PMI_RS13230 42.8 Proteus mirabilis HI4320 - EscU/YscU/HrcU family type III secretion system export apparatus switch protein

Distribution of the homologs in the orthogroup group_313

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_313

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
A3NLD7 6.69e-87 270 40 3 352 3 bsaZ Secretion apparatus protein BsaZ Burkholderia pseudomallei (strain 668)
Q2T713 7.62e-87 270 40 3 351 3 bsaZ Secretion apparatus protein BsaZ Burkholderia thailandensis (strain ATCC 700388 / DSM 13276 / CCUG 48851 / CIP 106301 / E264)
Q3JL20 8.82e-87 270 39 3 355 3 bsaZ Secretion apparatus protein BsaZ Burkholderia pseudomallei (strain 1710b)
Q62B05 9.01e-87 270 40 3 352 3 bsaZ Secretion apparatus protein BsaZ Burkholderia mallei (strain ATCC 23344)
A2S1P8 9.01e-87 270 40 3 352 3 bsaZ Secretion apparatus protein BsaZ Burkholderia mallei (strain NCTC 10229)
A3MCG6 9.01e-87 270 40 3 352 3 bsaZ Secretion apparatus protein BsaZ Burkholderia mallei (strain NCTC 10247)
I1WUC2 1.21e-86 270 40 3 352 3 bsaZ Secretion apparatus protein BsaZ Burkholderia pseudomallei (strain 1026b)
A3P6Z9 1.88e-86 270 40 3 352 3 bsaZ Secretion apparatus protein BsaZ Burkholderia pseudomallei (strain 1106a)
Q63K32 1.96e-86 270 40 3 352 3 bsaZ Secretion apparatus protein BsaZ Burkholderia pseudomallei (strain K96243)
P40702 1.31e-75 240 35 0 353 1 spaS Surface presentation of antigens protein SpaS Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A1M9 5.81e-64 209 35 3 345 3 spaS Surface presentation of antigens protein SpaS Shigella sonnei
P0A1M8 5.81e-64 209 35 3 345 1 spaS Surface presentation of antigens protein SpaS Shigella flexneri
P69987 4.07e-50 174 30 2 341 1 yscU Yop proteins translocation protein U Yersinia pseudotuberculosis serotype I (strain IP32953)
P69986 4.07e-50 174 30 2 341 1 yscU Yop proteins translocation protein U Yersinia pestis
P35538 1.5e-37 141 31 8 351 3 flhB Flagellar biosynthetic protein FlhB Bacillus subtilis (strain 168)
Q56886 4.43e-34 132 27 4 353 3 flhB Flagellar biosynthetic protein FlhB Yersinia enterocolitica
P35652 2.59e-33 129 30 9 357 3 hrcU Hypersensitivity response secretion protein HrcU Ralstonia nicotianae (strain ATCC BAA-1114 / GMI1000)
P96069 4.01e-31 124 30 10 363 3 ssaU Secretion system apparatus protein SsaU Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
O67813 1.23e-27 114 32 7 258 1 flhB Flagellar biosynthetic protein FlhB Aquifex aeolicus (strain VF5)
Q9ZL73 2.81e-27 113 28 9 354 3 flhB Flagellar biosynthetic protein FlhB Helicobacter pylori (strain J99 / ATCC 700824)
P40727 1.56e-25 108 23 7 370 1 flhB Flagellar biosynthetic protein FlhB Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P56416 1.99e-25 108 28 9 354 3 flhB Flagellar biosynthetic protein FlhB Helicobacter pylori (strain ATCC 700392 / 26695)
O54243 1.19e-24 106 27 7 329 3 flhB Flagellar biosynthetic protein FlhB Rhizobium meliloti (strain 1021)
P57334 5.49e-24 104 24 5 351 3 flhB Flagellar biosynthetic protein FlhB Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
Q89AN6 1.65e-22 100 27 10 366 3 flhB Flagellar biosynthetic protein FlhB Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp)
P76299 9.48e-21 95 22 5 350 1 flhB Flagellar biosynthetic protein FlhB Escherichia coli (strain K12)
O83710 2.45e-19 91 27 11 348 3 flhB Flagellar biosynthetic protein FlhB Treponema pallidum (strain Nichols)
Q44760 6.74e-18 87 24 6 329 3 flhB Flagellar biosynthetic protein FlhB Borreliella burgdorferi (strain ATCC 35210 / DSM 4680 / CIP 102532 / B31)
Q8K9S1 4.14e-15 79 22 8 367 3 flhB Flagellar biosynthetic protein FlhB Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
P55723 4.3e-09 60 22 9 322 3 NGR_a00580 Probable translocation protein y4yO Sinorhizobium fredii (strain NBRC 101917 / NGR234)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS10670
Feature type CDS
Gene -
Product EscU/YscU/HrcU family type III secretion system export apparatus switch protein
Location 262728 - 263792 (strand: 1)
Length 1065 (nucleotides) / 354 (amino acids)

Contig

Accession term accessions NZ_VXKB01000002 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 573139 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_313
Orthogroup size 8
N. genomes 7

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Genomic region

Domains

PF01312 FlhB HrpN YscU SpaS Family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1377 Cell motility (N) N Flagellar biosynthesis protein FlhB

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K22510 type III secretion system export apparatus switch protein - -

Protein Sequence

MAEKTEKPTSKKLKDESKKGNAFKYKELLSTVGYITGFCFLVYVADWRAFSRFCQIVLRNVNTLSLSVYIDELFSLFLKMVLPLIGLCGLSVSFVSLLQTRFALATEAIKFDLTKIDPIAGFKRIFTKKSLKNLVKALLSIGVYVSAAAVFTMMNIADIYALVNAPFSDVSHSFIHFVSRYIFIFMLLLCPLLVIDYIVEYFFFFSDMKMEKHEVKQEYKNSEGNQDIKSARKQQHRELLSSETKALIKNSDVVVVNPTHIAVAVYLDPENGVMPLITVKEKGGNALAIRQYAEKHQIPVVRDIPLARRLFKKYHVFDTIIDDDLDKFLDLLLWLKDVEQARQDTSDAENTLMR

Flanking regions ( +/- flanking 50bp)

GGTTGCACTGTTTGATCCGGTGCCGGTGGCGTTATTTTTGAGGGGAAGTGATGGCTGAAAAAACGGAAAAACCGACCAGTAAAAAACTCAAAGATGAATCAAAAAAAGGTAATGCGTTTAAATACAAGGAGTTGCTATCTACAGTTGGCTATATAACGGGGTTCTGCTTTTTGGTTTATGTGGCAGACTGGCGTGCTTTCAGCCGATTCTGTCAGATAGTTTTACGCAATGTAAACACACTCTCACTTTCAGTTTATATTGATGAATTATTTAGTCTTTTTCTCAAGATGGTTTTGCCACTGATTGGTTTGTGCGGATTGAGTGTCAGCTTTGTCTCCCTGTTGCAGACACGTTTTGCTCTTGCAACGGAAGCTATCAAATTTGATTTAACAAAGATTGATCCGATAGCCGGATTTAAGCGGATTTTTACTAAAAAATCCCTGAAAAATCTGGTGAAAGCGCTGTTATCAATCGGGGTATATGTGTCTGCCGCGGCTGTATTTACCATGATGAATATTGCTGATATTTATGCGCTGGTTAATGCCCCATTTTCTGATGTGAGCCACAGTTTTATCCATTTTGTCAGCCGCTATATCTTTATTTTTATGCTGTTGTTGTGCCCGCTGTTAGTTATTGACTATATCGTGGAGTATTTTTTCTTTTTCAGTGATATGAAAATGGAAAAACACGAGGTTAAACAAGAGTATAAAAATAGCGAGGGAAACCAGGACATAAAATCAGCCCGCAAACAGCAGCACAGGGAATTGCTGAGCTCGGAAACGAAAGCATTAATTAAAAATTCAGATGTGGTGGTGGTTAATCCGACACACATTGCTGTTGCTGTTTATCTTGATCCTGAAAACGGTGTGATGCCACTCATTACAGTAAAAGAAAAGGGGGGAAATGCTCTGGCTATCCGGCAATATGCCGAAAAGCACCAGATCCCTGTTGTCCGGGATATTCCGCTGGCGCGCCGGTTGTTTAAAAAGTACCACGTTTTTGACACCATTATTGATGATGATCTGGATAAATTCCTCGATCTGTTGTTGTGGCTGAAAGATGTGGAACAGGCAAGGCAGGATACATCAGATGCAGAAAATACACTCATGCGGTAGGCGAGTATTTTATGAAAGTGATTATCAGTAAATCCGGGTATAATTTACCT