Homologs in group_1474

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_09500 FBDBKF_09500 84.9 Morganella morganii S1 narL two-component system response regulator NarL
EHELCC_09910 EHELCC_09910 84.9 Morganella morganii S2 narL two-component system response regulator NarL
NLDBIP_19230 NLDBIP_19230 84.9 Morganella morganii S4 narL two-component system response regulator NarL
LHKJJB_19140 LHKJJB_19140 84.9 Morganella morganii S3 narL two-component system response regulator NarL
HKOGLL_18920 HKOGLL_18920 84.9 Morganella morganii S5 narL two-component system response regulator NarL
PMI_RS18005 PMI_RS18005 54.2 Proteus mirabilis HI4320 - glycerophosphoryl diester phosphodiesterase

Distribution of the homologs in the orthogroup group_1474

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1474

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q8RB32 4.54e-46 156 36 2 234 1 UgpQ Glycerophosphodiester phosphodiesterase Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4)
P10908 9.69e-34 125 32 2 231 1 ugpQ Glycerophosphodiester phosphodiesterase, cytoplasmic Escherichia coli (strain K12)
O07592 1.09e-33 124 32 5 240 3 yhdW Putative glycerophosphodiester phosphodiesterase YhdW Bacillus subtilis (strain 168)
P37965 6.89e-30 116 29 6 253 1 glpQ Glycerophosphodiester phosphodiesterase Bacillus subtilis (strain 168)
A0A8F4N283 3.09e-29 113 33 4 236 1 bagdpd Glycerophosphodiester phosphodiesterase Bacillus altitudinis
P54527 1.31e-27 108 30 3 236 4 yqiK Uncharacterized protein YqiK Bacillus subtilis (strain 168)
Q9JL56 5.76e-19 87 36 1 121 1 Gde1 Glycerophosphodiester phosphodiesterase 1 Mus musculus
Q9JL55 1.84e-18 86 36 1 121 1 Gde1 Glycerophosphodiester phosphodiesterase 1 Rattus norvegicus
Q3T0T0 1.98e-18 85 45 1 91 2 GDE1 Glycerophosphodiester phosphodiesterase 1 Bos taurus
Q9NZC3 4.02e-18 85 44 1 89 1 GDE1 Glycerophosphodiester phosphodiesterase 1 Homo sapiens
O07244 4.1e-15 75 29 9 254 1 glpQ2 Probable glycerophosphodiester phosphodiesterase 2 Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Q9ESM6 4.52e-15 77 27 5 257 1 Gdpd2 Glycerophosphoinositol inositolphosphodiesterase GDPD2 Mus musculus
Q9HCC8 6.11e-14 74 43 2 95 1 GDPD2 Glycerophosphoinositol inositolphosphodiesterase GDPD2 Homo sapiens
P47535 6.11e-14 72 28 6 219 4 MG293 Uncharacterized protein MG293 Mycoplasma genitalium (strain ATCC 33530 / DSM 19775 / NCTC 10195 / G37)
P75367 9.2e-14 71 28 5 196 4 MPN_420 Uncharacterized protein MG293 homolog Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1)
Q3KTM2 1.53e-12 70 32 5 160 1 GDPD5 Glycerophosphodiester phosphodiesterase domain-containing protein 5 Gallus gallus
Q6W3E5 1.96e-12 69 39 3 123 2 GDPD4 Glycerophosphodiester phosphodiesterase domain-containing protein 4 Homo sapiens
Q95JR7 2.37e-12 69 35 2 132 2 GDPD4 Glycerophosphodiester phosphodiesterase domain-containing protein 4 Macaca fascicularis
O14169 3.21e-12 68 25 5 243 3 SPAC4D7.02c Phosphatidylglycerol phospholipase C Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Q3TT99 3.94e-12 68 38 3 118 2 Gdpd4 Glycerophosphodiester phosphodiesterase domain-containing protein 4 Mus musculus
Q8WTR4 4.86e-12 68 30 4 173 1 GDPD5 Glycerophosphodiester phosphodiesterase domain-containing protein 5 Homo sapiens
Q640M6 4.95e-12 68 30 5 185 1 Gdpd5 Glycerophosphodiester phosphodiesterase domain-containing protein 5 Mus musculus
P9WMU3 1.17e-11 66 36 1 98 1 glpQ1 Probable glycerophosphodiester phosphodiesterase 1 Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WMU2 1.17e-11 66 36 1 98 3 glpQ1 Probable glycerophosphodiester phosphodiesterase 1 Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
F4I8H8 2.56e-09 60 23 6 244 2 GDPD4 Glycerophosphodiester phosphodiesterase GDPD4 Arabidopsis thaliana
Q8N9F7 1.91e-08 57 25 9 270 1 GDPD1 Lysophospholipase D GDPD1 Homo sapiens
P9WLF0 2.43e-08 57 35 1 97 3 MT2337 Uncharacterized protein MT2337 Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P9WLF1 2.58e-08 57 30 4 150 1 Rv2277c Uncharacterized protein Rv2277c Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Q08959 9e-08 55 36 0 71 1 PGC1 Phosphatidylglycerol phospholipase C Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Q9CRY7 1.79e-07 54 25 9 269 1 Gdpd1 Lysophospholipase D GDPD1 Mus musculus
Q0VGK4 1.87e-07 54 26 10 266 2 Gdpd1 Lysophospholipase D GDPD1 Rattus norvegicus
Q9C104 4.59e-07 53 38 2 76 1 gde1 Glycerophosphocholine phosphodiesterase gde1 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
P47625 2.85e-06 50 24 1 121 4 MG385 Uncharacterized protein MG385 Mycoplasma genitalium (strain ATCC 33530 / DSM 19775 / NCTC 10195 / G37)
Q8C0L9 3.02e-06 51 24 14 312 1 Gpcpd1 Glycerophosphocholine phosphodiesterase GPCPD1 Mus musculus
P75212 5.11e-06 49 24 2 158 4 MPN_566 Uncharacterized protein MG385 homolog Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1)
Q9FLM1 9.79e-06 49 32 3 100 2 GDPD2 Glycerophosphodiester phosphodiesterase GDPD2 Arabidopsis thaliana
Q9SD81 1.62e-05 48 32 4 113 2 GDPD6 Glycerophosphodiester phosphodiesterase GDPD6 Arabidopsis thaliana
Q9C907 2.06e-05 48 43 0 53 2 GDPD5 Glycerophosphodiester phosphodiesterase GDPD5 Arabidopsis thaliana
Q02979 2.76e-05 48 41 1 60 1 GDE1 Glycerophosphocholine phosphodiesterase GDE1 Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Q9SGA2 0.000117 46 31 3 83 1 GDPD1 Glycerophosphodiester phosphodiesterase GDPD1, chloroplastic Arabidopsis thaliana
A0A1D8PNZ7 0.000165 46 41 1 58 1 GDE1 Glycerophosphocholine phosphodiesterase GDE1 Candida albicans (strain SC5314 / ATCC MYA-2876)
Q06282 0.000315 45 31 1 85 1 glpQ Glycerophosphodiester phosphodiesterase Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q680A6 0.000418 44 32 3 83 2 GDPD3 Glycerophosphodiester phosphodiesterase GDPD3 Arabidopsis thaliana
Q99LY2 0.000469 44 35 0 68 1 Gdpd3 Lysophospholipase D GDPD3 Mus musculus
Q9NPB8 0.000505 44 23 14 312 1 GPCPD1 Glycerophosphocholine phosphodiesterase GPCPD1 Homo sapiens
P09394 0.000763 43 26 1 104 1 glpQ Glycerophosphodiester phosphodiesterase, periplasmic Escherichia coli (strain K12)
P55427 0.000873 43 25 3 128 4 NGR_a03890 Uncharacterized protein y4eD Sinorhizobium fredii (strain NBRC 101917 / NGR234)
Q74ZH9 0.001 43 38 1 55 3 GDE1 Glycerophosphocholine phosphodiesterase GDE1 Eremothecium gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS10470
Feature type CDS
Gene -
Product glycerophosphoryl diester phosphodiesterase
Location 211551 - 212288 (strand: 1)
Length 738 (nucleotides) / 245 (amino acids)

Contig

Accession term accessions NZ_VXKB01000002 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 573139 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1474
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF03009 Glycerophosphoryl diester phosphodiesterase family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0584 Lipid transport and metabolism (I) I Glycerophosphoryl diester phosphodiesterase

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K01126 glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] Glycerophospholipid metabolism -

Protein Sequence

MIIAAHRGFASRAPENTMTSFREAVEFGCSWIETDVQLSADGVPVLIHDETVNRTTNGSGKVTDLTLRELRALDAGLWFGEAFRGEKIPLLTDLLELAAENGTHLNLELKTELTDSDAAIADLCEATAAVIEMSDFPAEQILFSSFDSRTLRHMHKRMPLIRRGQLWEKIPEQPLTLLQEIDAFSVHCDWLFLQEKTVKSLKKSGYQVYCYTANYPELVAHFADWGVGMLITDNPGVYRTENIFS

Flanking regions ( +/- flanking 50bp)

TATATACTCTATAAGCGGATCTGTCATATATAAAGTATAAAGGAACAAATATGATTATTGCAGCGCACCGTGGTTTTGCTTCCCGCGCACCGGAAAATACCATGACCTCTTTCCGGGAGGCGGTTGAGTTTGGTTGTTCGTGGATTGAAACGGATGTTCAGCTCAGCGCTGATGGTGTGCCGGTCCTTATTCATGATGAAACGGTGAACCGTACCACCAACGGCAGCGGAAAAGTGACGGATTTAACGCTGCGGGAATTGCGGGCTCTGGATGCCGGGCTGTGGTTTGGTGAAGCATTTCGCGGGGAGAAAATTCCGCTGCTGACGGATTTACTGGAACTGGCGGCAGAAAATGGCACACACCTTAATCTGGAACTGAAAACAGAACTGACAGACAGTGATGCGGCAATTGCTGACCTGTGCGAAGCCACCGCTGCGGTGATTGAAATGAGTGACTTTCCCGCAGAACAAATTCTTTTCTCAAGCTTTGATTCCCGCACATTGCGTCATATGCACAAGCGGATGCCGCTTATCCGGCGCGGACAGCTCTGGGAGAAAATCCCTGAACAGCCACTGACATTGTTGCAGGAAATTGATGCGTTCAGTGTGCACTGTGACTGGCTGTTTTTACAGGAAAAAACGGTAAAATCTCTGAAGAAATCCGGTTATCAGGTCTATTGTTACACGGCGAATTACCCGGAACTGGTTGCTCACTTTGCCGACTGGGGTGTGGGTATGCTGATCACGGATAACCCGGGTGTGTACAGAACGGAAAACATCTTTTCCTGAATGGAAAACAGAGTTTCGTTATTTGTCAGTAGGGAAAGTAAAAACGGCTG