Orthogroup:group_1474


Homologs in group_1474

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_09500 FBDBKF_09500 Morganella morganii S1 narL two-component system response regulator NarL
EHELCC_09910 EHELCC_09910 Morganella morganii S2 narL two-component system response regulator NarL
NLDBIP_19230 NLDBIP_19230 Morganella morganii S4 narL two-component system response regulator NarL
LHKJJB_19140 LHKJJB_19140 Morganella morganii S3 narL two-component system response regulator NarL
HKOGLL_18920 HKOGLL_18920 Morganella morganii S5 narL two-component system response regulator NarL
F4V73_RS10470 F4V73_RS10470 Morganella psychrotolerans - glycerophosphoryl diester phosphodiesterase
PMI_RS18005 PMI_RS18005 Proteus mirabilis HI4320 - glycerophosphoryl diester phosphodiesterase

Distribution of group_1474 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1474 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1474

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1474.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 narL 5
2 - 2

Product

# Product Occurence
1 two-component system response regulator NarL 5
2 glycerophosphoryl diester phosphodiesterase 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0584 7 I Lipid transport and metabolism (I) Glycerophosphoryl diester phosphodiesterase

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K01126 7 glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] Glycerophospholipid metabolism -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF03009 7 Glycerophosphoryl diester phosphodiesterase family

Annotations of the 49 SwissProt hits

Annotation Number of occurrences
Glycerophosphocholine phosphodiesterase GDE1 3
Glycerophosphocholine phosphodiesterase GPCPD1 3
Glycerophosphocholine phosphodiesterase gde1 1
Glycerophosphodiester phosphodiesterase 4
Glycerophosphodiester phosphodiesterase 1 4
Glycerophosphodiester phosphodiesterase GDPD1, chloroplastic 1
Glycerophosphodiester phosphodiesterase GDPD2 1
Glycerophosphodiester phosphodiesterase GDPD3 1
Glycerophosphodiester phosphodiesterase GDPD4 1
Glycerophosphodiester phosphodiesterase GDPD5 1
Glycerophosphodiester phosphodiesterase GDPD6 1
Glycerophosphodiester phosphodiesterase domain-containing protein 4 3
Glycerophosphodiester phosphodiesterase domain-containing protein 5 3
Glycerophosphodiester phosphodiesterase, cytoplasmic 1
Glycerophosphodiester phosphodiesterase, periplasmic 1
Glycerophosphoinositol inositolphosphodiesterase GDPD2 2
Lysophospholipase D GDPD1 3
Lysophospholipase D GDPD3 1
Phosphatidylglycerol phospholipase C 2
Probable glycerophosphodiester phosphodiesterase 1 2
Probable glycerophosphodiester phosphodiesterase 2 1
Putative glycerophosphodiester phosphodiesterase YhdW 1
Uncharacterized protein MG293 1
Uncharacterized protein MG293 homolog 1
Uncharacterized protein MG385 1
Uncharacterized protein MG385 homolog 1
Uncharacterized protein MT2337 1
Uncharacterized protein Rv2277c 1
Uncharacterized protein YqiK 1
Uncharacterized protein y4eD 1

Protein length

Min length 238
Max length 245
Mean length (sd) 244.0 (2.6)
Median length 245.0

Protein length distribution