Homologs in group_3035

Help

5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_18095 FBDBKF_18095 83.9 Morganella morganii S1 fepB ABC-type Fe3+-hydroxamate transport system, periplasmic component
EHELCC_16795 EHELCC_16795 83.9 Morganella morganii S2 fepB ABC-type Fe3+-hydroxamate transport system, periplasmic component
NLDBIP_17655 NLDBIP_17655 83.9 Morganella morganii S4 fepB ABC-type Fe3+-hydroxamate transport system, periplasmic component
LHKJJB_17575 LHKJJB_17575 83.9 Morganella morganii S3 fepB ABC-type Fe3+-hydroxamate transport system, periplasmic component
HKOGLL_17390 HKOGLL_17390 83.9 Morganella morganii S5 fepB ABC-type Fe3+-hydroxamate transport system, periplasmic component

Distribution of the homologs in the orthogroup group_3035

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_3035

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS10300
Feature type CDS
Gene -
Product ABC transporter substrate-binding protein
Location 171794 - 172894 (strand: 1)
Length 1101 (nucleotides) / 366 (amino acids)

Contig

Accession term accessions NZ_VXKB01000002 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 573139 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3035
Orthogroup size 6
N. genomes 6

Actions

Genomic region

Domains

PF01497 Periplasmic binding protein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0614 Inorganic ion transport and metabolism (P) P ABC-type Fe3+-hydroxamate transport system, periplasmic component

Protein Sequence

MRILLLVVTLVLSVAAQAQTRIITDLQGRPVAVNTPVKRLFLADARDILAVDIAAGKNHLSSLSGWSDTLAHYAPDLEAAYLDVMPELARLPVLPKSKDGTFVVENLLALSPDAVLMHKSSYGLMKSSNLLPQLEAAGIPVIFIDFRSDMTENTPKSIQILGELFDTQDRADAFTEYYQLKLAALRKRLPEQAATVLIESNAGLFGNECCKLYGRTGFGELAALAGGNNLVSESIPANGAESNTENILHLNPQFYVLTGADWKQYNRRSEAVSLGYGVQPEPARAEMNALMNRQGLASLDAVKSHRVMAIYHNFYNSPLNIFAAEALATFFHPQAFSDMNPQAEIISFHQRFTAISGAGTFWVTAQ

Flanking regions ( +/- flanking 50bp)

CGGCCGGACATTTGCACTTAATTATCAGGTAACATTCTGAGACTCTTTCTATGCGTATATTGTTGTTGGTTGTAACCCTGGTCCTGAGCGTGGCAGCACAGGCTCAGACCCGGATAATCACAGATTTACAGGGCCGCCCGGTTGCAGTGAATACCCCGGTAAAACGGCTGTTTCTGGCAGATGCCCGCGATATTCTGGCGGTGGATATAGCTGCCGGAAAGAATCACCTTTCTTCTCTCAGCGGATGGAGTGATACGCTGGCACACTATGCGCCGGATCTGGAAGCCGCGTATCTGGATGTGATGCCGGAACTGGCGCGTTTGCCGGTTCTGCCTAAGAGCAAAGACGGTACGTTTGTGGTGGAAAATCTGCTGGCACTCTCTCCGGATGCGGTGCTGATGCATAAATCGTCTTACGGGCTGATGAAAAGTTCCAATCTGCTGCCGCAACTGGAAGCTGCCGGGATCCCTGTGATTTTTATTGATTTTCGCAGTGATATGACAGAAAACACGCCGAAGAGTATTCAGATCCTCGGTGAGTTATTTGACACGCAGGACCGGGCTGACGCATTCACGGAATATTATCAGCTGAAACTGGCGGCGTTACGCAAACGACTGCCGGAGCAGGCCGCCACTGTATTGATTGAAAGCAATGCCGGGTTATTCGGTAATGAGTGCTGCAAGCTGTACGGGCGCACCGGTTTTGGTGAGTTAGCGGCATTAGCGGGTGGAAATAATCTGGTCAGTGAATCAATACCGGCAAACGGCGCAGAAAGTAACACAGAGAATATCCTGCATCTCAACCCGCAGTTTTATGTGTTGACCGGTGCTGACTGGAAACAATATAACCGGCGCTCAGAGGCGGTAAGTCTTGGTTACGGTGTACAGCCTGAACCGGCACGGGCAGAGATGAACGCGCTGATGAACCGGCAGGGGCTTGCGTCACTGGACGCGGTAAAATCGCACAGAGTGATGGCGATTTACCATAACTTTTATAACAGCCCGCTGAATATTTTTGCCGCAGAGGCACTGGCGACATTTTTCCACCCGCAGGCATTCAGTGATATGAATCCACAGGCGGAAATTATCTCATTTCATCAGCGGTTTACAGCAATCAGTGGCGCTGGGACGTTCTGGGTAACAGCGCAGTAATCTGACCATCTGTCACGGCATATTATGAATAAGGGCAACCACAGATGTTG