Homologs in group_176

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8 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_01385 FBDBKF_01385 27.5 Morganella morganii S1 - DUF1240 domain-containing protein
EHELCC_00160 EHELCC_00160 27.5 Morganella morganii S2 - DUF1240 domain-containing protein
NLDBIP_03300 NLDBIP_03300 27.5 Morganella morganii S4 - DUF1240 domain-containing protein
LHKJJB_04815 LHKJJB_04815 27.5 Morganella morganii S3 - DUF1240 domain-containing protein
HKOGLL_02230 HKOGLL_02230 27.5 Morganella morganii S5 - DUF1240 domain-containing protein
PMI_RS15225 PMI_RS15225 53.4 Proteus mirabilis HI4320 - DUF1240 domain-containing protein
PMI_RS19695 PMI_RS19695 58.6 Proteus mirabilis HI4320 - DUF1240 domain-containing protein
PMI_RS19175 PMI_RS19175 31.7 Proteus mirabilis HI4320 - DUF1240 domain-containing protein

Distribution of the homologs in the orthogroup group_176

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_176

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS10130
Feature type CDS
Gene -
Product DUF1240 domain-containing protein
Location 136343 - 136744 (strand: -1)
Length 402 (nucleotides) / 133 (amino acids)

Contig

Accession term accessions NZ_VXKB01000002 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 573139 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_176
Orthogroup size 9
N. genomes 7

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Genomic region

Domains

PF06836 Protein of unknown function (DUF1240)

Protein Sequence

MVKAASIKLLLSSVFLLLLAGYGIYVSIAHYLDYFLMKEKIEFSFLTGLFGFGSPLIIYFAYFGFILSRDIKPTKRTVSTAKYLAGIAIFGMIFSLFFSAYVNVSLTSKGYLICDKKSIFAPNEYVLSKNMCK

Flanking regions ( +/- flanking 50bp)

AACAACTCATTATTCGGATCAGTTTTTTACCCTTCAGGGGAAACATAGCCGTGGTTAAAGCAGCCTCTATCAAATTACTCCTTTCATCTGTATTTTTACTTCTTTTGGCTGGCTATGGGATATATGTTTCAATAGCTCATTATCTGGATTATTTTTTGATGAAGGAGAAAATAGAGTTTTCATTCTTAACCGGTCTGTTCGGTTTTGGCTCCCCCTTGATTATTTATTTTGCATATTTTGGATTTATTTTATCACGCGATATAAAACCAACAAAAAGAACAGTAAGCACTGCAAAATATCTGGCAGGAATAGCAATATTCGGCATGATTTTTAGTTTGTTTTTTTCAGCCTACGTCAACGTTAGCCTGACATCAAAAGGTTATCTGATTTGTGACAAAAAATCCATATTCGCTCCTAATGAATATGTTCTATCAAAAAATATGTGTAAATAAATAGTACGTGGTTTAATTATTAACCACTTGGCAGTAAAGCAATGTCACCT