Orthogroup:group_224


Homologs in group_224

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8 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_00500 FBDBKF_00500 Morganella morganii S1 putP sodium/proline symporter PutP
EHELCC_01045 EHELCC_01045 Morganella morganii S2 putP sodium/proline symporter PutP
NLDBIP_02415 NLDBIP_02415 Morganella morganii S4 putP sodium/proline symporter PutP
LHKJJB_03930 LHKJJB_03930 Morganella morganii S3 putP sodium/proline symporter PutP
HKOGLL_03115 HKOGLL_03115 Morganella morganii S5 putP sodium/proline symporter PutP
F4V73_RS06510 F4V73_RS06510 Morganella psychrotolerans putP sodium/proline symporter PutP
PMI_RS07890 PMI_RS07890 Proteus mirabilis HI4320 putP sodium/proline symporter PutP
PMI_RS18035 PMI_RS18035 Proteus mirabilis HI4320 panF sodium/pantothenate symporter

Distribution of group_224 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_224 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_224

Orthogroup content: 8 members

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This page summarizes the annotation of all members of the orthologous group group_224.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 putP 7
2 panF 1

Product

# Product Occurence
1 sodium/proline symporter PutP 7
2 sodium/pantothenate symporter 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0591 7 E Amino acid transport and metabolism (E) Na+/proline symporter
COG4145 1 H Coenzyme transport and metabolism (H) Na+/panthothenate symporter

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K11928 7 sodium/proline symporter - -
K14392 1 sodium/pantothenate symporter - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00474 8 Sodium:solute symporter family

Annotations of the 154 SwissProt hits

Annotation Number of occurrences
Cation/acetate symporter ActP 59
High affinity choline transporter 1 3
High-affinity choline transporter 1 3
High-affinity proline transporter PutP 1
Monocarboxylate transport permease protein 1
Monocarboxylic acid transporter 1
Osmoregulated proline transporter OpuE 1
Probable glucose sensor protein SLC5A4 1
Probable urea active transporter 3 1
Putative sodium-dependent multivitamin transporter 1
Sodium-coupled monocarboxylate transporter 1 5
Sodium-coupled monocarboxylate transporter 2 4
Sodium-dependent multivitamin transporter 4
Sodium/glucose cotransporter 1
Sodium/glucose cotransporter 1 5
Sodium/glucose cotransporter 1 (Fragment) 1
Sodium/glucose cotransporter 2 4
Sodium/glucose cotransporter 4 3
Sodium/iodide cotransporter 3
Sodium/mannose cotransporter SLC5A10 5
Sodium/myo-inositol cotransporter 4
Sodium/myo-inositol cotransporter 2 6
Sodium/pantothenate symporter 2
Sodium/proline symporter 21
Sodium/proline symporter (Fragment) 1
Sodium/proline symporter 1 1
Sodium/proline symporter 2 1
Sodium/sialic acid symporter NanT 1
Sodium/sialic acid symporter SiaT 1
Solute carrier family 5 member 4 2
Solute carrier family 5 member 4A 1
Solute carrier family 5 member 4B 1
Uncharacterized symporter H16_A2524 1
Uncharacterized symporter YhjB 1
Uncharacterized symporter YidK 1
Uncharacterized symporter YodF 1
Uncharacterized symporter YwcA 1

Protein length

Min length 481
Max length 497
Mean length (sd) 494.4 (5.5)
Median length 497.0

Protein length distribution