Homologs in group_1341

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_08315 FBDBKF_08315 82.1 Morganella morganii S1 hemX uroporphyrinogen-III C-methyltransferase
EHELCC_13210 EHELCC_13210 82.1 Morganella morganii S2 hemX uroporphyrinogen-III C-methyltransferase
NLDBIP_13550 NLDBIP_13550 82.1 Morganella morganii S4 hemX uroporphyrinogen-III C-methyltransferase
LHKJJB_13005 LHKJJB_13005 82.1 Morganella morganii S3 hemX uroporphyrinogen-III C-methyltransferase
HKOGLL_12025 HKOGLL_12025 82.1 Morganella morganii S5 hemX uroporphyrinogen-III C-methyltransferase
PMI_RS16570 PMI_RS16570 55.2 Proteus mirabilis HI4320 hemX uroporphyrinogen-III C-methyltransferase

Distribution of the homologs in the orthogroup group_1341

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1341

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P09127 3.32e-126 374 52 7 397 1 hemX Protein HemX Escherichia coli (strain K12)
O86227 8.17e-31 120 40 3 169 4 HI_0602.1 Uncharacterized protein HI_0602.1 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P44773 5.7e-14 74 33 5 200 1 HI_0603 Uncharacterized protein HI_0603 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS09515
Feature type CDS
Gene hemX
Product uroporphyrinogen-III C-methyltransferase
Location 1948 - 3285 (strand: -1)
Length 1338 (nucleotides) / 445 (amino acids)

Contig

Accession term accessions NZ_VXKB01000002 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 573139 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1341
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2959 General function prediction only (R) R Proteobacterial HemX domain, involved in 2-ketogluconate production (unrelated to B. subtilis HemX, COG0755, no evidence of involvement in heme biosynthesis)

Kegg Ortholog Annotation(s)

Protein Sequence

MTELEKKTGSADTPDTQDGVSDTAVQADKQTAAREKSAGKNVTEKAASAKNNTTAQPETPTRGHTPPEPSAAEKKPQSGFLRSAVALAVILLIGGGVWYASQINTQTLSQRLEAENAQLKSQMAQLQQEQLQSHKQMQEFITQQSALSAQYQQQDATLKHELDLLRSRVSTLSSADVKSWLIAQADFLVKMAERKLWNDQDVVTAMVLLKNADASLAEMNDPGLLDVRTALRNDITALSAVSQIDFDGTILRLNQLANQVDNLRIDDGSRDGAPMDSSDSEGITSSVADWRTNLTKSWQSFMSDFITIRRRDSSAAPLLAPNQDIYVRENIRAQLLIAAQAVPRHQEESYKQALDSVSTWVRAYFADNDPENTAFLKEIDELAAQPVAMSIPDSLSSQPLLDKLVQTRIRRLLNDEALPPPVAEPQAVPAEPAPAVPEAAPKQEG

Flanking regions ( +/- flanking 50bp)

GAAGCCTTACTTCAGGCTCTACAATGAATAAAAAATATGGGACGCCACTTATGACGGAACTCGAAAAAAAAACCGGATCTGCTGATACGCCTGACACACAGGATGGCGTATCTGATACAGCGGTGCAGGCGGATAAACAAACCGCGGCCCGGGAAAAATCTGCCGGAAAAAACGTCACTGAAAAAGCGGCGTCAGCTAAAAACAACACAACCGCACAGCCGGAAACACCAACGCGCGGACACACCCCGCCCGAACCCTCTGCCGCAGAAAAAAAACCGCAGTCCGGTTTTCTGCGCAGTGCCGTTGCGCTCGCCGTTATTTTACTGATCGGCGGCGGTGTATGGTATGCATCGCAGATCAATACGCAAACACTGTCACAGCGGCTGGAAGCGGAAAACGCACAGCTGAAATCACAGATGGCGCAGTTGCAGCAGGAACAATTGCAAAGCCATAAACAAATGCAGGAATTTATCACTCAGCAATCAGCACTCAGCGCTCAGTATCAGCAACAGGATGCCACACTGAAACATGAGCTGGATTTGCTGCGCAGCCGTGTCAGCACCTTGTCCAGTGCCGATGTAAAAAGCTGGCTGATAGCACAGGCTGATTTTCTGGTCAAAATGGCAGAACGCAAGCTATGGAATGATCAGGATGTCGTCACCGCCATGGTATTACTGAAAAATGCCGATGCCAGCCTGGCAGAAATGAACGACCCCGGTCTGCTGGATGTCCGGACCGCGCTGCGTAATGATATCACCGCGCTCTCAGCGGTCAGCCAGATCGATTTTGACGGCACTATTTTACGCCTGAATCAACTGGCAAATCAGGTTGATAACCTGCGTATTGATGATGGCAGCCGTGACGGTGCGCCGATGGACAGCAGCGACAGCGAAGGTATCACATCATCCGTTGCAGACTGGCGGACAAACCTGACCAAAAGCTGGCAGAGCTTTATGAGTGACTTTATTACTATCCGCCGCCGCGACAGCAGCGCTGCACCTCTGCTGGCACCAAATCAGGATATTTATGTCCGTGAAAATATCCGCGCCCAGTTGCTGATTGCCGCTCAGGCGGTGCCGCGTCACCAGGAAGAGAGCTACAAACAGGCACTGGATTCAGTCTCCACCTGGGTTCGTGCATATTTTGCGGATAATGACCCGGAAAATACTGCATTCCTGAAAGAAATTGATGAATTAGCCGCACAGCCTGTCGCCATGAGCATACCGGACAGCCTGTCCAGCCAGCCGCTGCTGGATAAACTGGTACAGACGCGGATCCGCCGTTTGCTCAATGATGAGGCTCTGCCACCACCGGTTGCCGAACCACAGGCAGTACCCGCAGAGCCGGCGCCTGCTGTGCCGGAAGCAGCACCAAAACAGGAGGGATAACGGATGTTTAAACTCTTTATTCTGTTCCTTGTCCTGATCGCGGGGATCAT