Homologs in group_1397

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_08315 FBDBKF_08315 55.3 Morganella morganii S1 hemX uroporphyrinogen-III C-methyltransferase
EHELCC_13210 EHELCC_13210 55.3 Morganella morganii S2 hemX uroporphyrinogen-III C-methyltransferase
NLDBIP_13550 NLDBIP_13550 55.3 Morganella morganii S4 hemX uroporphyrinogen-III C-methyltransferase
LHKJJB_13005 LHKJJB_13005 55.3 Morganella morganii S3 hemX uroporphyrinogen-III C-methyltransferase
HKOGLL_12025 HKOGLL_12025 55.3 Morganella morganii S5 hemX uroporphyrinogen-III C-methyltransferase
F4V73_RS09515 F4V73_RS09515 55.2 Morganella psychrotolerans hemX uroporphyrinogen-III C-methyltransferase

Distribution of the homologs in the orthogroup group_1397

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1397

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P09127 2.77e-125 370 53 4 374 1 hemX Protein HemX Escherichia coli (strain K12)
Q51887 6.27e-38 138 91 0 73 3 hemX Protein HemX (Fragment) Proteus mirabilis
O86227 1.1e-35 132 51 1 131 4 HI_0602.1 Uncharacterized protein HI_0602.1 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P44773 3.82e-23 100 36 2 193 1 HI_0603 Uncharacterized protein HI_0603 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS16570
Feature type CDS
Gene hemX
Product uroporphyrinogen-III C-methyltransferase
Location 3651246 - 3652496 (strand: -1)
Length 1251 (nucleotides) / 416 (amino acids)
In genomic island -

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1397
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2959 General function prediction only (R) R Proteobacterial HemX domain, involved in 2-ketogluconate production (unrelated to B. subtilis HemX, COG0755, no evidence of involvement in heme biosynthesis)

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K02498 HemY protein - -

Protein Sequence

MTEQKNTNENDLQNGTSKADDDIRYQEVKPVNNKRSGLIGSAVAILVILAIGGGLYYYTTQQATKLSTENQSLKSQLAQLQQLQDTYQQRFDNIDSQFNSQKLTIDKLQNERQVTERQIQNLQTQFAAISSADVKSWLLAQADFMVKMAGRKLWNDQDVVTAVSLLKGADSSLAEMNDPSLLAIRRAINEDIGNLAALSKIDNDGTILQLNQLANQVDNLRLSGFERDGSPMDKNDEAISGSLSDWKQNLSKSWKSFMDDFITIRRRDSTAIPLLAPNQDIYLRENIRSRLLIASQAVPRHQTEIYQQSLEAVSTWVRAYFDTTDPNTTAFLDSINELEKQPITLAMPTELKSLSLLEKRVEKQIRNLLTQNETSQPEAVEAKDAEATQAPYAVDAAQDSATSGTTTSTTVAPQGE

Flanking regions ( +/- flanking 50bp)

AATGATGCTTTATTTCATGCATTAATATAGAACTTAAATGAGACGCCGATATGACGGAACAGAAAAATACGAATGAAAATGACTTGCAGAATGGTACATCAAAGGCTGATGACGATATCCGCTATCAAGAAGTAAAACCTGTAAACAATAAGCGTTCAGGTTTGATAGGGAGTGCCGTTGCGATCCTCGTTATTCTGGCAATCGGTGGTGGTCTTTATTATTACACCACTCAACAAGCGACTAAACTAAGTACAGAAAACCAATCGCTAAAATCACAATTGGCACAATTACAACAATTGCAAGATACTTATCAACAACGTTTTGACAATATTGACAGTCAGTTTAACTCACAAAAACTCACTATTGATAAACTGCAAAATGAACGCCAAGTTACTGAGCGTCAAATCCAAAATTTACAAACGCAATTTGCGGCTATCTCAAGTGCAGATGTAAAGAGCTGGCTATTAGCACAAGCTGATTTTATGGTAAAAATGGCGGGCCGCAAATTATGGAATGACCAAGATGTCGTCACAGCGGTAAGTTTATTAAAAGGCGCTGATAGTAGCTTAGCAGAAATGAATGACCCAAGCTTATTGGCCATTCGCCGCGCCATTAATGAAGATATTGGCAACTTAGCCGCGCTGAGCAAAATTGATAATGATGGTACTATTTTACAATTAAATCAGTTAGCTAATCAGGTTGATAACCTACGCTTATCTGGATTTGAGCGTGATGGCTCACCGATGGATAAAAATGATGAAGCCATTTCAGGCTCGCTTTCTGACTGGAAGCAAAACCTCAGTAAAAGCTGGAAAAGCTTTATGGATGACTTTATTACTATCCGTCGTCGAGACAGTACCGCTATTCCACTATTAGCTCCAAACCAAGATATTTATCTGCGAGAAAATATCCGCTCTCGTTTATTAATTGCATCTCAAGCGGTGCCTCGCCATCAAACAGAGATTTATCAACAATCATTAGAAGCGGTATCTACTTGGGTACGCGCCTATTTTGATACCACCGATCCGAATACAACGGCTTTCTTAGACAGTATTAATGAGCTTGAAAAGCAGCCTATTACTCTTGCAATGCCAACAGAATTAAAAAGCCTCTCTCTGTTAGAAAAACGAGTAGAAAAGCAGATCCGTAATTTGCTGACCCAAAACGAGACATCACAGCCAGAAGCGGTTGAAGCCAAAGATGCCGAAGCTACACAAGCCCCTTATGCGGTTGATGCAGCACAAGATAGTGCAACATCAGGAACAACGACATCAACAACCGTAGCACCACAAGGAGAATAAATTTATGTTCAAGATCTTACTCCTGTTTGTGGTATTGATTGCAGGGATAA