Homologs in group_1340

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_08310 FBDBKF_08310 88.5 Morganella morganii S1 hemY Uncharacterized protein HemY, contains HemY_N domain and TPR repeats (unrelated to protoporphyrinogen oxidase HemY)
EHELCC_13215 EHELCC_13215 88.5 Morganella morganii S2 hemY Uncharacterized protein HemY, contains HemY_N domain and TPR repeats (unrelated to protoporphyrinogen oxidase HemY)
NLDBIP_13555 NLDBIP_13555 88.5 Morganella morganii S4 hemY Uncharacterized protein HemY, contains HemY_N domain and TPR repeats (unrelated to protoporphyrinogen oxidase HemY)
LHKJJB_13000 LHKJJB_13000 88.5 Morganella morganii S3 hemY Uncharacterized protein HemY, contains HemY_N domain and TPR repeats (unrelated to protoporphyrinogen oxidase HemY)
HKOGLL_12030 HKOGLL_12030 88.5 Morganella morganii S5 hemY Uncharacterized protein HemY, contains HemY_N domain and TPR repeats (unrelated to protoporphyrinogen oxidase HemY)
PMI_RS16565 PMI_RS16565 56.9 Proteus mirabilis HI4320 hemY protoheme IX biogenesis protein HemY

Distribution of the homologs in the orthogroup group_1340

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1340

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0ACC0 8.27e-148 427 55 0 381 3 hemY Protein HemY Shigella flexneri
P0ACB7 8.27e-148 427 55 0 381 1 hemY Protein HemY Escherichia coli (strain K12)
P0ACB8 8.27e-148 427 55 0 381 3 hemY Protein HemY Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0ACB9 8.27e-148 427 55 0 381 3 hemY Protein HemY Escherichia coli O157:H7
P44772 1.9e-72 236 35 2 362 3 hemY Protein HemY homolog Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS09510
Feature type CDS
Gene -
Product heme biosynthesis HemY N-terminal domain-containing protein
Location 745 - 1944 (strand: -1)
Length 1200 (nucleotides) / 399 (amino acids)

Contig

Accession term accessions NZ_VXKB01000002 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 573139 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1340
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF07219 HemY protein N-terminus

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3071 Function unknown (S) S Uncharacterized protein HemY, contains HemY_N domain and TPR repeats (unrelated to protoporphyrinogen oxidase HemY)

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K02498 HemY protein - -

Protein Sequence

MFKLFILFLVLIAGIIIGPLVAGHQGYVLIQTDDYDIETSVTGLVICFLGLQAALILLGWCWRRLRTGSSRTLGWFGGHKRNRARSLTNDALLKLAEGDFRQVEKLLSRSADNAEQPLVNYLLAAEAAQQRSDNIRANQYLERAAELAGNHQLPVDITRARILLTRNEIPAARTAIDNLLDIAPRHPEVLRLAEQVYARSGAWKSLVAILPAMKKSGEFTDEQVEQTETRAWLGMMQQVADQDGSDALRHWWKNLSRHLRHNPDLAVAAAQHFIAGDDMSDAEAVILDGLKRQKDDRLLILLPRIRTENPKAIRKILNQLQKDDSKQPLLNSTLGQMAMQEGRWEDAEQYFKSALNTRRDTHDAAWLADVLDKQKKYEESAMIRRNALLDTLTLPDENH

Flanking regions ( +/- flanking 50bp)

AGCCGGCGCCTGCTGTGCCGGAAGCAGCACCAAAACAGGAGGGATAACGGATGTTTAAACTCTTTATTCTGTTCCTTGTCCTGATCGCGGGGATCATTATCGGACCGCTGGTCGCCGGACATCAGGGCTATGTACTGATCCAGACTGATGATTATGACATTGAAACCAGTGTCACCGGGCTCGTTATCTGCTTTCTCGGATTACAGGCCGCGCTGATATTACTCGGCTGGTGCTGGCGTCGTCTGAGAACCGGCAGTTCCCGGACTCTGGGCTGGTTTGGCGGTCATAAGCGCAACCGCGCCCGCAGCCTGACCAATGACGCCCTGCTTAAACTGGCAGAAGGCGATTTCCGCCAGGTGGAAAAATTGCTCAGCCGCAGTGCAGATAATGCCGAACAACCGCTGGTCAACTATTTACTTGCCGCAGAAGCAGCACAACAGCGCAGTGATAATATCCGGGCTAATCAATATCTTGAACGGGCAGCTGAACTGGCCGGAAATCACCAGTTACCGGTTGATATCACCCGCGCACGTATTTTGCTGACCCGTAATGAAATTCCGGCAGCACGCACCGCAATTGATAACCTGCTGGATATTGCCCCGCGCCATCCGGAAGTACTGCGTCTGGCAGAGCAGGTTTATGCACGCTCCGGTGCCTGGAAATCCCTGGTTGCCATCTTGCCGGCAATGAAAAAATCCGGTGAGTTTACTGATGAGCAGGTTGAGCAGACAGAAACCCGCGCCTGGCTCGGTATGATGCAGCAGGTTGCCGATCAGGATGGCAGTGATGCACTGCGCCACTGGTGGAAAAATCTGAGCCGCCATCTGCGTCATAATCCGGATCTGGCGGTAGCCGCTGCACAGCACTTTATTGCCGGTGATGATATGAGTGATGCAGAAGCCGTGATACTTGACGGGCTGAAACGACAGAAAGATGATCGCCTGCTGATACTGCTGCCACGTATCCGGACAGAAAATCCGAAAGCTATCCGTAAAATACTGAACCAGCTACAGAAAGATGACAGCAAACAACCGTTGCTCAACAGTACATTGGGGCAAATGGCGATGCAGGAAGGCCGGTGGGAAGACGCTGAGCAATACTTCAAATCCGCCCTGAATACCCGCAGGGATACACATGATGCCGCCTGGCTTGCCGATGTGCTGGATAAACAAAAGAAATATGAAGAGTCAGCAATGATCCGCCGCAATGCACTGCTGGACACACTGACACTGCCGGATGAGAACCATTAACTTTACACTGATACGTCATTAAAAGAGATTGACGACATCATGTATTGATG