Homologs in group_1340

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_08310 FBDBKF_08310 55.0 Morganella morganii S1 hemY Uncharacterized protein HemY, contains HemY_N domain and TPR repeats (unrelated to protoporphyrinogen oxidase HemY)
EHELCC_13215 EHELCC_13215 55.0 Morganella morganii S2 hemY Uncharacterized protein HemY, contains HemY_N domain and TPR repeats (unrelated to protoporphyrinogen oxidase HemY)
NLDBIP_13555 NLDBIP_13555 55.0 Morganella morganii S4 hemY Uncharacterized protein HemY, contains HemY_N domain and TPR repeats (unrelated to protoporphyrinogen oxidase HemY)
LHKJJB_13000 LHKJJB_13000 55.0 Morganella morganii S3 hemY Uncharacterized protein HemY, contains HemY_N domain and TPR repeats (unrelated to protoporphyrinogen oxidase HemY)
HKOGLL_12030 HKOGLL_12030 55.0 Morganella morganii S5 hemY Uncharacterized protein HemY, contains HemY_N domain and TPR repeats (unrelated to protoporphyrinogen oxidase HemY)
F4V73_RS09510 F4V73_RS09510 56.9 Morganella psychrotolerans - heme biosynthesis HemY N-terminal domain-containing protein

Distribution of the homologs in the orthogroup group_1340

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1340

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0ACC0 3.43e-169 482 60 0 384 3 hemY Protein HemY Shigella flexneri
P0ACB7 3.43e-169 482 60 0 384 1 hemY Protein HemY Escherichia coli (strain K12)
P0ACB8 3.43e-169 482 60 0 384 3 hemY Protein HemY Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0ACB9 3.43e-169 482 60 0 384 3 hemY Protein HemY Escherichia coli O157:H7
P44772 9.26e-86 270 36 3 407 3 hemY Protein HemY homolog Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS16565
Feature type CDS
Gene hemY
Product protoheme IX biogenesis protein HemY
Location 3650012 - 3651241 (strand: -1)
Length 1230 (nucleotides) / 409 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1340
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF07219 HemY protein N-terminus

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3071 Function unknown (S) S Uncharacterized protein HemY, contains HemY_N domain and TPR repeats (unrelated to protoporphyrinogen oxidase HemY)

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K02498 HemY protein - -

Protein Sequence

MFKILLLFVVLIAGIIFGPVLAGHQGYVFIQTDNWDIETSVTSLVIMFVLLQLILLLLGWCYRRFIGTGSKAYSWFSLRKRSRARKQTRLALMKLAEGDFKQVEKLMSRNADYAEQPVVNYLLAAEAAQQRGDEFRVQQHLERASELADTNQLPVDITRVRILLAQNENHAARTGVDELLNQVPRHPEVLRLAETAYIRTEAWQALLDIIPSMQKIALHTDDELEQLRQQAYIGLMGQKMSENGCDGLKNWWKAQPRKIQHDNGLRFVLAEHLIECNDPQTAQTIILDGIKRHYDERLILLLPRLKNSDPDSILKVLNSLIKQHGPTPLLNSTVGQIAMQQGQWAQAETAFRNALKQRPDVHDFAWLADVLDKQNKSVESAKVRKDALLMTLKKDSVIFDEPKTNKALQ

Flanking regions ( +/- flanking 50bp)

ATCAGGAACAACGACATCAACAACCGTAGCACCACAAGGAGAATAAATTTATGTTCAAGATCTTACTCCTGTTTGTGGTATTGATTGCAGGGATAATCTTCGGCCCTGTATTAGCGGGTCATCAAGGTTATGTCTTTATACAAACCGATAATTGGGATATTGAAACTAGCGTTACCAGTCTTGTGATCATGTTTGTCCTACTGCAACTGATATTGCTCTTGCTTGGCTGGTGTTATCGTCGTTTTATTGGTACAGGCTCTAAAGCCTATAGTTGGTTCTCTTTGCGCAAACGCAGCCGAGCACGTAAACAAACACGGTTAGCATTAATGAAACTTGCGGAAGGTGATTTCAAACAAGTAGAAAAGCTGATGAGCCGCAATGCCGATTATGCGGAACAACCTGTAGTAAACTATTTACTAGCAGCAGAAGCAGCACAACAACGGGGTGATGAGTTTAGAGTACAGCAACATCTGGAGCGAGCTTCTGAGCTTGCTGATACCAATCAGTTACCCGTTGATATTACCCGAGTGCGCATTTTACTGGCACAAAATGAAAACCATGCTGCTCGTACTGGGGTTGATGAATTACTCAATCAAGTGCCTCGTCATCCGGAAGTATTACGCTTAGCAGAAACTGCGTATATACGTACAGAAGCTTGGCAAGCACTACTTGATATCATCCCTTCAATGCAGAAAATAGCCCTACATACAGATGATGAATTAGAGCAATTACGTCAACAAGCCTATATTGGGCTGATGGGACAGAAGATGTCCGAAAATGGTTGTGATGGACTGAAAAATTGGTGGAAGGCACAGCCTCGTAAGATCCAACATGATAATGGACTACGATTTGTATTAGCAGAACACCTTATTGAGTGCAACGATCCGCAAACTGCGCAGACGATCATTTTAGATGGGATCAAACGTCACTATGATGAACGCCTGATCTTATTGTTACCGCGCTTAAAAAACAGCGATCCAGACTCAATATTAAAAGTGCTTAACTCACTAATTAAACAACATGGTCCGACACCATTACTCAATAGCACCGTCGGTCAAATTGCCATGCAACAAGGGCAATGGGCACAAGCAGAAACAGCATTTCGCAATGCATTAAAACAGCGTCCAGATGTTCATGATTTTGCGTGGTTGGCTGATGTGCTAGATAAACAGAATAAATCAGTTGAGTCAGCCAAAGTACGCAAAGATGCGCTATTAATGACGTTAAAAAAAGACTCTGTTATTTTTGACGAGCCTAAAACAAATAAAGCACTGCAATAAATACATCATTTCATTTATTGACCAAAACCCTCAAACACAAAATTGAGGGT