Orthogroup:group_1340


Homologs in group_1340

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7 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_07800 FBDBKF_07800 Morganella morganii S1 xdhA xanthine dehydrogenase molybdenum-binding subunit XdhA
EHELCC_13630 EHELCC_13630 Morganella morganii S2 xdhA xanthine dehydrogenase molybdenum-binding subunit XdhA
NLDBIP_14075 NLDBIP_14075 Morganella morganii S4 xdhA xanthine dehydrogenase molybdenum-binding subunit XdhA
LHKJJB_08775 LHKJJB_08775 Morganella morganii S3 xdhA xanthine dehydrogenase molybdenum-binding subunit XdhA
LHKJJB_19970 LHKJJB_19970 Morganella morganii S3 xdhA Xanthine dehydrogenase subunit XdhA
HKOGLL_08325 HKOGLL_08325 Morganella morganii S5 xdhA xanthine dehydrogenase molybdenum-binding subunit XdhA
F4V73_RS13245 F4V73_RS13245 Morganella psychrotolerans xdhA xanthine dehydrogenase molybdenum-binding subunit XdhA

Distribution of group_1340 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1340 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1340

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1340.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 xdhA 7

Product

# Product Occurence
1 xanthine dehydrogenase molybdenum-binding subunit XdhA 6
2 Xanthine dehydrogenase subunit XdhA 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1529 7 C Energy production and conversion (C) Aldehyde, CO or xanthine dehydrogenase, Mo-binding subunit

Kegg Ortholog Annotation(s)

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01315 6 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
PF02738 6 Molybdopterin cofactor-binding domain
PF20256 6 Molybdopterin cofactor-binding domain

Annotations of the 65 SwissProt hits

Annotation Number of occurrences
4-hydroxybenzoyl-CoA reductase subunit alpha 1
6-hydroxypseudooxynicotine dehydrogenase complex subunit gamma 1
Abscisic-aldehyde oxidase 1
Aldehyde oxidase 1
Aldehyde oxidase 1 6
Aldehyde oxidase 2 4
Aldehyde oxidase 3 2
Aldehyde oxidase 4 4
Aldehyde oxidoreductase 1
Aldehyde oxidoreductase molybdenum-binding subunit PaoC 2
Caffeine dehydrogenase subunit alpha 1
Carbon monoxide dehydrogenase large chain 2
Glyceraldehyde dehydrogenase large chain 1
Indole-3-acetaldehyde oxidase 4
Isoquinoline 1-oxidoreductase subunit beta 1
Membrane-bound aldehyde dehydrogenase [pyrroloquinoline-quinone] 1
Nicotinate dehydrogenase large molybdopterin subunit 1
Nicotinate dehydrogenase medium molybdopterin subunit 1
Nicotinate dehydrogenase subunit B 1
Nicotinate hydroxylase hnxS 1
Nicotine 6-hydroxylase large subunit 1
Probable aldehyde oxidase 1 1
Probable aldehyde oxidase 2 1
Probable aldehyde oxidase 3 1
Probable aldehyde oxidase 4 1
Probable aldehyde oxidase gad-3 1
Probable hypoxanthine oxidase XdhD 2
Probable xanthine dehydrogenase subunit D 1
Putative aldehyde oxidase-like protein 1
Putative xanthine dehydrogenase molybdenum-binding subunit XdhA 1
Xanthine dehydrogenase 8
Xanthine dehydrogenase 1 1
Xanthine dehydrogenase 2 1
Xanthine dehydrogenase molybdenum-binding subunit 1
Xanthine dehydrogenase/oxidase 6

Protein length

Min length 72
Max length 768
Mean length (sd) 668.6 (263.1)
Median length 768.0

Protein length distribution