Homologs in group_908

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_04825 FBDBKF_04825 83.2 Morganella morganii S1 zinT metal-binding protein ZinT
EHELCC_06115 EHELCC_06115 83.2 Morganella morganii S2 zinT metal-binding protein ZinT
NLDBIP_06435 NLDBIP_06435 83.2 Morganella morganii S4 zinT metal-binding protein ZinT
LHKJJB_03315 LHKJJB_03315 83.2 Morganella morganii S3 zinT metal-binding protein ZinT
HKOGLL_06790 HKOGLL_06790 83.2 Morganella morganii S5 zinT metal-binding protein ZinT
PMI_RS16825 PMI_RS16825 72.3 Proteus mirabilis HI4320 zinT metal-binding protein ZinT

Distribution of the homologs in the orthogroup group_908

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_908

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P76344 2.93e-93 274 60 1 201 1 zinT Metal-binding protein ZinT Escherichia coli (strain K12)
O05410 4.18e-56 181 48 1 178 3 yrpE Probable metal-binding protein YrpE Bacillus subtilis (strain 168)
Q8CWN2 8.8e-54 182 43 0 199 1 adcA Zinc-binding lipoprotein AdcA Streptococcus pneumoniae (strain ATCC BAA-255 / R6)
O05703 1.22e-53 182 43 0 199 3 adcA Zinc-binding lipoprotein AdcA Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)
Q5XD15 3.71e-51 176 46 2 188 3 adcA Zinc-binding protein AdcA Streptococcus pyogenes serotype M6 (strain ATCC BAA-946 / MGAS10394)
Q8P1N2 3.91e-51 175 46 2 188 3 adcA Zinc-binding protein AdcA Streptococcus pyogenes serotype M18 (strain MGAS8232)
P0DF59 3.95e-51 175 46 2 188 3 adcA Zinc-binding protein AdcA Streptococcus pyogenes serotype M3 (strain SSI-1)
P0DF58 3.95e-51 175 46 2 188 3 adcA Zinc-binding protein AdcA Streptococcus pyogenes serotype M3 (strain ATCC BAA-595 / MGAS315)
Q9A0L9 8.21e-50 172 45 2 188 3 adcA Zinc-binding protein AdcA Streptococcus pyogenes serotype M1

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS09280
Feature type CDS
Gene zinT
Product metal-binding protein ZinT
Location 1947542 - 1948186 (strand: -1)
Length 645 (nucleotides) / 214 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_908
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3443 Inorganic ion transport and metabolism (P) P Periplasmic Zn/Cd-binding protein ZinT

Protein Sequence

MITKSIISALLMGGLLSSTAMAHGHHHDKPQTQAQRKAAEGTFDAKDVQNRTLSDWDGVWQSVEPYLASGELDPVMQAKATKNKDKTAEEYRAYYTNGYKTDVDMIGIENNIIEFHRGDKVEQCEYHYAGYRVLNYTSGKKGARYLFECKDKNSKAPKFIQFSDHIISPEKAEHFHLYMGNESQDALLAEMDNWPTFYPYTMSGNDIVHEMLHH

Flanking regions ( +/- flanking 50bp)

TATGTTATTTGCAAATCCAATCCGCGCTTTAAAGCAGTACAGGGGTAAGTATGATCACAAAATCGATTATTTCTGCATTGCTGATGGGCGGGCTGTTAAGCAGTACGGCGATGGCTCATGGTCATCATCATGATAAACCGCAGACGCAGGCTCAGCGCAAGGCGGCAGAAGGAACATTTGACGCTAAAGATGTGCAGAACCGCACTTTGAGTGACTGGGACGGGGTCTGGCAATCTGTCGAACCTTATCTTGCCAGTGGTGAACTGGATCCTGTGATGCAGGCTAAAGCCACGAAAAATAAGGATAAAACAGCAGAAGAGTATCGTGCTTATTATACGAATGGATATAAAACAGATGTGGATATGATTGGTATTGAAAATAATATCATTGAATTTCATCGCGGAGACAAGGTGGAGCAGTGTGAATATCACTATGCCGGTTACCGGGTTCTGAATTACACCTCCGGGAAAAAAGGTGCACGTTACCTGTTTGAATGTAAAGATAAAAATAGTAAGGCGCCGAAATTTATTCAGTTCAGTGATCATATTATTTCACCGGAAAAAGCAGAGCATTTCCATCTTTATATGGGAAATGAGTCTCAGGACGCGCTGCTGGCTGAGATGGATAACTGGCCGACATTCTATCCGTATACAATGAGCGGAAACGATATTGTTCACGAGATGCTTCATCATTGATTGCAATTTGCGTTCCCCGGAAATCAGGGGGACGCTATTTCTCTGAGAGT