COG3443


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG3443, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Periplasmic Zn/Cd-binding protein ZinT
Function(s) descr. Inorganic ion transport and metabolism (P)

Occurence in the database

COG3443 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_908 FBDBKF_04825 171888 172532 -1 zinT metal-binding protein ZinT Morganella morganii S1
1 group_908 EHELCC_06115 231345 231989 -1 zinT metal-binding protein ZinT Morganella morganii S2
2 group_908 NLDBIP_06435 272410 273054 -1 zinT metal-binding protein ZinT Morganella morganii S4
3 group_908 LHKJJB_03315 249934 250578 -1 zinT metal-binding protein ZinT Morganella morganii S3
4 group_908 HKOGLL_06790 171798 172442 -1 zinT metal-binding protein ZinT Morganella morganii S5
5 group_908 F4V73_RS09280 1947542 1948186 -1 zinT metal-binding protein ZinT Morganella psychrotolerans
6 group_908 PMI_RS16825 3705760 3706407 1 zinT metal-binding protein ZinT Proteus mirabilis HI4320