Homologs in group_898

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_04705 FBDBKF_04705 96.5 Morganella morganii S1 araH Ribose/xylose/arabinose/galactoside ABC-type transport system, permease component
EHELCC_05995 EHELCC_05995 96.5 Morganella morganii S2 araH Ribose/xylose/arabinose/galactoside ABC-type transport system, permease component
NLDBIP_06315 NLDBIP_06315 96.5 Morganella morganii S4 araH Ribose/xylose/arabinose/galactoside ABC-type transport system, permease component
LHKJJB_03195 LHKJJB_03195 96.5 Morganella morganii S3 araH Ribose/xylose/arabinose/galactoside ABC-type transport system, permease component
HKOGLL_06670 HKOGLL_06670 96.5 Morganella morganii S5 araH Ribose/xylose/arabinose/galactoside ABC-type transport system, permease component
F4V73_RS09125 F4V73_RS09125 43.0 Morganella psychrotolerans - ABC transporter permease

Distribution of the homologs in the orthogroup group_898

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_898

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P36948 7.5e-93 283 48 4 324 3 rbsC Ribose import permease protein RbsC Bacillus subtilis (strain 168)
P44736 5.02e-81 252 49 3 290 3 rbsC Ribose import permease protein RbsC Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P0AGI1 4.79e-80 250 49 5 292 1 rbsC Ribose import permease protein RbsC Escherichia coli (strain K12)
P0AGI2 4.79e-80 250 49 5 292 3 rbsC Ribose import permease protein RbsC Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0AGI3 4.79e-80 250 49 5 292 3 rbsC Ribose import permease protein RbsC Escherichia coli O157:H7
P32720 7.58e-58 193 39 4 315 1 alsC D-allose transport system permease protein AlsC Escherichia coli (strain K12)
P77315 2.39e-54 184 39 4 292 3 yphD Probable ABC transporter permease protein YphD Escherichia coli (strain K12)
P44885 3.02e-54 184 36 4 301 3 mglC Galactose/methyl galactoside import permease protein MglC Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P45045 4.28e-48 169 36 5 356 3 xylH Xylose transport system permease protein XylH Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q1JUP6 5.53e-48 167 32 5 352 3 araH L-arabinose ABC transporter permease protein AraH Azospirillum brasilense
Q9F9B1 2.83e-46 164 35 7 362 1 frcC Fructose import permease protein FrcC Rhizobium meliloti
P0AE27 3.65e-46 162 31 4 339 3 araH L-arabinose transport system permease protein AraH Shigella flexneri
P0AE26 3.65e-46 162 31 4 339 2 araH L-arabinose transport system permease protein AraH Escherichia coli (strain K12)
P55569 3.77e-45 160 35 8 335 3 NGR_a02490 Probable ABC transporter permease protein y4mJ Sinorhizobium fredii (strain NBRC 101917 / NGR234)
P0AGI7 1.23e-44 160 34 6 356 3 xylH Xylose transport system permease protein XylH Shigella flexneri
P0AGI4 1.23e-44 160 34 6 356 1 xylH Xylose transport system permease protein XylH Escherichia coli (strain K12)
P0AGI5 1.23e-44 160 34 6 356 3 xylH Xylose transport system permease protein XylH Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0AGI6 1.23e-44 160 34 6 356 3 xylH Xylose transport system permease protein XylH Escherichia coli O157:H7
Q56036 9.78e-40 146 38 5 292 1 mglC Galactose/methyl galactoside import permease protein MglC Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P23200 3e-39 144 38 6 295 1 mglC Galactose/methyl galactoside import permease protein MglC Escherichia coli (strain K12)
P39328 4.39e-38 142 37 2 261 1 ytfT Galactofuranose transporter permease protein YtfT Escherichia coli (strain K12)
Q2PBL9 2.64e-36 137 30 5 293 3 lsrC Autoinducer 2 import system permease protein LsrC Photorhabdus luminescens
Q8G845 5.48e-36 136 35 5 276 1 fruG Fructose import permease protein FruG Bifidobacterium longum (strain NCC 2705)
Q7N2D8 1.47e-35 135 30 5 290 3 lsrC Autoinducer 2 import system permease protein LsrC Photorhabdus laumondii subsp. laumondii (strain DSM 15139 / CIP 105565 / TT01)
P37772 2.32e-35 134 34 5 282 1 yjfF Inner membrane ABC transporter permease protein YjfF Escherichia coli (strain K12)
A4TQL6 2.7e-35 134 29 6 331 3 lsrC Autoinducer 2 import system permease protein LsrC Yersinia pestis (strain Pestoides F)
Q1CN16 2.7e-35 134 29 6 331 3 lsrC Autoinducer 2 import system permease protein LsrC Yersinia pestis bv. Antiqua (strain Nepal516)
A9R075 2.7e-35 134 29 6 331 3 lsrC Autoinducer 2 import system permease protein LsrC Yersinia pestis bv. Antiqua (strain Angola)
Q7CG49 2.7e-35 134 29 6 331 3 lsrC Autoinducer 2 import system permease protein LsrC Yersinia pestis
Q1C137 2.7e-35 134 29 6 331 3 lsrC Autoinducer 2 import system permease protein LsrC Yersinia pestis bv. Antiqua (strain Antiqua)
A7FMJ8 1.16e-34 133 30 7 332 3 lsrC Autoinducer 2 import system permease protein LsrC Yersinia pseudotuberculosis serotype O:1b (strain IP 31758)
B1JLQ1 2.69e-34 132 29 6 331 3 lsrC Autoinducer 2 import system permease protein LsrC Yersinia pseudotuberculosis serotype O:3 (strain YPIII)
Q66EZ0 4.42e-34 131 29 6 331 3 lsrC Autoinducer 2 import system permease protein LsrC Yersinia pseudotuberculosis serotype I (strain IP32953)
B2K3G0 4.42e-34 131 29 6 331 3 lsrC Autoinducer 2 import system permease protein LsrC Yersinia pseudotuberculosis serotype IB (strain PB1/+)
A1JJ54 7.94e-34 130 33 6 292 3 lsrC Autoinducer 2 import system permease protein LsrC Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)
Q2PBM2 1.34e-33 129 29 5 290 3 lsrC Autoinducer 2 import system permease protein LsrC Photorhabdus temperata
Q57321 1.54e-33 133 31 10 344 3 mglC Galactose/methyl galactoside import permease protein MglC Treponema pallidum (strain Nichols)
A7FMJ9 3.45e-33 128 28 3 290 3 lsrD Autoinducer 2 import system permease protein LsrD Yersinia pseudotuberculosis serotype O:1b (strain IP 31758)
B1JLQ2 5.33e-33 128 27 3 290 3 lsrD Autoinducer 2 import system permease protein LsrD Yersinia pseudotuberculosis serotype O:3 (strain YPIII)
Q66EZ1 5.33e-33 128 27 3 290 3 lsrD Autoinducer 2 import system permease protein LsrD Yersinia pseudotuberculosis serotype I (strain IP32953)
B2K3F9 5.55e-33 128 27 3 290 3 lsrD Autoinducer 2 import system permease protein LsrD Yersinia pseudotuberculosis serotype IB (strain PB1/+)
A1JJ53 8.32e-33 127 30 3 269 3 lsrD Autoinducer 2 import system permease protein LsrD Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)
Q8G846 1.08e-32 127 33 8 348 1 fruF Fructose import permease protein FruF Bifidobacterium longum (strain NCC 2705)
A4TQL7 1.44e-32 127 27 3 290 3 lsrD Autoinducer 2 import system permease protein LsrD Yersinia pestis (strain Pestoides F)
Q1CN17 1.44e-32 127 27 3 290 3 lsrD Autoinducer 2 import system permease protein LsrD Yersinia pestis bv. Antiqua (strain Nepal516)
A9R076 1.44e-32 127 27 3 290 3 lsrD Autoinducer 2 import system permease protein LsrD Yersinia pestis bv. Antiqua (strain Angola)
Q7CG48 1.44e-32 127 27 3 290 3 lsrD Autoinducer 2 import system permease protein LsrD Yersinia pestis
Q1C136 1.44e-32 127 27 3 290 3 lsrD Autoinducer 2 import system permease protein LsrD Yersinia pestis bv. Antiqua (strain Antiqua)
Q2PBM1 8.39e-32 125 30 5 282 3 lsrD Autoinducer 2 import system permease protein LsrD Photorhabdus temperata
Q7N2D7 6.84e-30 119 30 7 288 3 lsrD Autoinducer 2 import system permease protein LsrD Photorhabdus laumondii subsp. laumondii (strain DSM 15139 / CIP 105565 / TT01)
Q2PBL8 1.16e-29 119 30 7 292 3 lsrD Autoinducer 2 import system permease protein LsrD Photorhabdus luminescens
Q5PJE5 2.26e-28 115 27 2 280 3 lsrD Autoinducer 2 import system permease protein LsrD Salmonella paratyphi A (strain ATCC 9150 / SARB42)
Q8ZKQ2 2.34e-28 115 27 2 280 1 lsrD Autoinducer 2 import system permease protein LsrD Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
A9MZG3 2.34e-28 115 27 2 280 3 lsrD Autoinducer 2 import system permease protein LsrD Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
Q57HE1 2.34e-28 115 27 2 280 3 lsrD Autoinducer 2 import system permease protein LsrD Salmonella choleraesuis (strain SC-B67)
Q8Z2X7 1.03e-27 114 26 2 280 3 lsrD Autoinducer 2 import system permease protein LsrD Salmonella typhi
Q4J711 6.04e-27 112 30 6 288 1 xylH Xylose/arabinose import permease protein XylH Sulfolobus acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
P0AFS2 1.06e-25 108 27 6 333 3 lsrD Autoinducer 2 import system permease protein LsrD Shigella flexneri
Q0T4L7 1.06e-25 108 27 6 333 3 lsrD Autoinducer 2 import system permease protein LsrD Shigella flexneri serotype 5b (strain 8401)
P0AFS1 1.06e-25 108 27 6 333 1 lsrD Autoinducer 2 import system permease protein LsrD Escherichia coli (strain K12)
B1IRU5 1.06e-25 108 27 6 333 3 lsrD Autoinducer 2 import system permease protein LsrD Escherichia coli (strain ATCC 8739 / DSM 1576 / NBRC 3972 / NCIMB 8545 / WDCM 00012 / Crooks)
A8A068 1.06e-25 108 27 6 333 3 lsrD Autoinducer 2 import system permease protein LsrD Escherichia coli O9:H4 (strain HS)
B1XEA3 1.06e-25 108 27 6 333 3 lsrD Autoinducer 2 import system permease protein LsrD Escherichia coli (strain K12 / DH10B)
A4WER2 1.14e-25 108 27 5 287 3 lsrD Autoinducer 2 import system permease protein LsrD Enterobacter sp. (strain 638)
B1LFA0 1.21e-25 108 27 6 333 3 lsrD Autoinducer 2 import system permease protein LsrD Escherichia coli (strain SMS-3-5 / SECEC)
Q8X504 2.77e-25 107 27 6 333 3 lsrD Autoinducer 2 import system permease protein LsrD Escherichia coli O157:H7
B1IRU6 8.9e-23 100 28 5 292 3 lsrC Autoinducer 2 import system permease protein LsrC Escherichia coli (strain ATCC 8739 / DSM 1576 / NBRC 3972 / NCIMB 8545 / WDCM 00012 / Crooks)
A8A067 8.9e-23 100 28 5 292 3 lsrC Autoinducer 2 import system permease protein LsrC Escherichia coli O9:H4 (strain HS)
Q0T4L8 1.11e-22 100 28 5 292 3 lsrC Autoinducer 2 import system permease protein LsrC Shigella flexneri serotype 5b (strain 8401)
B1LFA1 1.7e-22 99 27 5 292 3 lsrC Autoinducer 2 import system permease protein LsrC Escherichia coli (strain SMS-3-5 / SECEC)
A6TEB6 1.89e-22 99 28 5 286 3 lsrD Autoinducer 2 import system permease protein LsrD Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578)
Q8XAY8 2.09e-22 99 28 5 292 3 lsrC Autoinducer 2 import system permease protein LsrC Escherichia coli O157:H7
Q83RD8 2.11e-22 99 28 5 292 3 lsrC Autoinducer 2 import system permease protein LsrC Shigella flexneri
P77672 2.2e-22 99 28 5 292 1 lsrC Autoinducer 2 import system permease protein LsrC Escherichia coli (strain K12)
B1XEA2 2.2e-22 99 28 5 292 3 lsrC Autoinducer 2 import system permease protein LsrC Escherichia coli (strain K12 / DH10B)
A4WER3 2.23e-22 99 31 4 246 3 lsrC Autoinducer 2 import system permease protein LsrC Enterobacter sp. (strain 638)
Q57HE2 6.26e-22 98 29 3 289 3 lsrC Autoinducer 2 import system permease protein LsrC Salmonella choleraesuis (strain SC-B67)
Q8ZKQ3 3.13e-21 96 29 3 289 1 lsrC Autoinducer 2 import system permease protein LsrC Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q5PJE6 3.13e-21 96 29 3 289 3 lsrC Autoinducer 2 import system permease protein LsrC Salmonella paratyphi A (strain ATCC 9150 / SARB42)
A9MZG2 3.18e-21 96 28 2 289 3 lsrC Autoinducer 2 import system permease protein LsrC Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
Q8Z2X6 3.19e-21 96 29 3 289 3 lsrC Autoinducer 2 import system permease protein LsrC Salmonella typhi
A6TEB7 9.36e-18 86 30 3 307 3 lsrC Autoinducer 2 import system permease protein LsrC Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578)
O05254 7.5e-05 47 28 6 208 1 nupP Guanosine ABC transporter permease protein NupP Bacillus subtilis (strain 168)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS09180
Feature type CDS
Gene -
Product ABC transporter permease
Location 1922532 - 1923572 (strand: 1)
Length 1041 (nucleotides) / 346 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_898
Orthogroup size 7
N. genomes 6

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Genomic region

Domains

PF02653 Branched-chain amino acid transport system / permease component

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1172 Carbohydrate transport and metabolism (G) G Ribose/xylose/arabinose/galactoside ABC-type transport system, permease component

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K17206 putative xylitol transport system permease protein ABC transporters -

Protein Sequence

MNTTNTAPSPGISFIARNKKNMHKYGIILAFFVLCLIVAVVGEIQVARGDWSNNYFLSQDNMMIILRQISINGILAIGMTFVIITAGVDLSVGSVLALSGIVAARFATSNTGLAIGDTANAAMIPMIVALGIGIVCGLLNGTILAKFNLQPFIVTMGMLSAARGLTLLTTDGNPVSQLNSDFRWLGNGYIFDIPVPVVILAAIFILAWILLNKTTFGRYVYAVGGNPKSARTSGISVIKIKVLVYTLCGALAGIAGLILTARTGSAQTSAGSAYELDAIAAVVIGGTSMAGGVGTLVGTLFGVLIIGVMNNGLDLLGVQSYYQQIIKGALIVIAVLLDPSRKQRRD

Flanking regions ( +/- flanking 50bp)

ATGCACAGCCGTTCACCCGTCATCGCACGCATGAATAAAGAGAAGTTACCATGAATACAACAAATACTGCGCCCTCACCAGGGATCTCATTTATTGCCCGTAACAAGAAAAATATGCACAAATACGGCATCATTCTGGCGTTCTTTGTTCTGTGCCTGATTGTTGCTGTTGTGGGTGAAATTCAGGTCGCCCGTGGCGACTGGAGCAATAACTACTTTCTGAGCCAGGATAATATGATGATTATCCTGCGCCAGATTTCGATTAACGGCATTCTCGCCATCGGCATGACCTTCGTTATCATTACCGCCGGTGTTGATTTGTCTGTAGGCTCCGTTCTGGCACTGAGCGGCATTGTGGCGGCGCGGTTTGCCACCAGCAATACCGGACTGGCTATCGGTGATACTGCCAATGCGGCGATGATCCCGATGATTGTCGCCCTGGGGATAGGGATTGTCTGTGGTCTGCTCAACGGCACAATTCTGGCAAAATTTAATCTCCAGCCGTTTATCGTCACCATGGGGATGTTATCTGCCGCGCGCGGTCTGACACTGCTGACCACTGACGGCAACCCGGTATCACAGCTTAACAGTGATTTCCGCTGGTTAGGAAACGGCTACATTTTTGATATCCCGGTGCCGGTGGTTATTCTTGCCGCTATCTTTATTCTTGCCTGGATTTTACTGAATAAAACCACGTTCGGGCGTTATGTTTACGCCGTCGGCGGAAATCCGAAGAGTGCAAGAACCTCCGGCATCAGCGTAATTAAGATCAAAGTGCTGGTTTACACCCTGTGCGGCGCATTAGCCGGTATCGCAGGTCTTATCCTGACCGCCCGCACCGGTTCAGCACAGACCAGCGCCGGGAGTGCTTACGAGCTGGATGCTATCGCTGCCGTTGTTATCGGCGGAACCAGTATGGCAGGCGGCGTCGGGACATTAGTCGGCACCCTGTTCGGCGTATTAATTATTGGCGTGATGAATAACGGCCTCGACCTGCTCGGTGTTCAGTCCTATTACCAGCAGATTATCAAAGGTGCATTAATTGTTATCGCCGTGCTTTTAGATCCGTCACGCAAACAACGTCGTGACTGACAGCAGTACCCACGCGGATTTTTTCAGCCCGCCACATTCCGGATGACAAG