Orthogroup:group_898


Homologs in group_898

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7 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_04705 FBDBKF_04705 Morganella morganii S1 araH Ribose/xylose/arabinose/galactoside ABC-type transport system, permease component
EHELCC_05995 EHELCC_05995 Morganella morganii S2 araH Ribose/xylose/arabinose/galactoside ABC-type transport system, permease component
NLDBIP_06315 NLDBIP_06315 Morganella morganii S4 araH Ribose/xylose/arabinose/galactoside ABC-type transport system, permease component
LHKJJB_03195 LHKJJB_03195 Morganella morganii S3 araH Ribose/xylose/arabinose/galactoside ABC-type transport system, permease component
HKOGLL_06670 HKOGLL_06670 Morganella morganii S5 araH Ribose/xylose/arabinose/galactoside ABC-type transport system, permease component
F4V73_RS09125 F4V73_RS09125 Morganella psychrotolerans - ABC transporter permease
F4V73_RS09180 F4V73_RS09180 Morganella psychrotolerans - ABC transporter permease

Distribution of group_898 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_898 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_898

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_898.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 araH 5
2 - 2

Product

# Product Occurence
1 Ribose/xylose/arabinose/galactoside ABC-type transport system, permease component 5
2 ABC transporter permease 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1172 7 G Carbohydrate transport and metabolism (G) Ribose/xylose/arabinose/galactoside ABC-type transport system, permease component

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K10440 1 ribose transport system permease protein ABC transporters -
K17206 6 putative xylitol transport system permease protein ABC transporters -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF02653 7 Branched-chain amino acid transport system / permease component

Annotations of the 84 SwissProt hits

Annotation Number of occurrences
Autoinducer 2 import system permease protein LsrC 28
Autoinducer 2 import system permease protein LsrD 28
D-allose transport system permease protein AlsC 1
Fructose import permease protein FrcC 1
Fructose import permease protein FruF 1
Fructose import permease protein FruG 1
Galactofuranose transporter permease protein YtfT 1
Galactose/methyl galactoside import permease protein MglC 4
Guanosine ABC transporter permease protein NupP 1
Inner membrane ABC transporter permease protein YjfF 1
L-arabinose ABC transporter permease protein AraH 1
L-arabinose transport system permease protein AraH 2
Probable ABC transporter permease protein YphD 1
Probable ABC transporter permease protein y4mJ 1
Ribose import permease protein RbsC 5
Tyrosine transport system permease protein 1
Xylose transport system permease protein XylH 5
Xylose/arabinose import permease protein XylH 1

Protein length

Unique protein length 346

Protein length distribution