Homologs in group_89

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11 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_07875 FBDBKF_07875 52.6 Morganella morganii S1 tnaA tryptophanase
FBDBKF_11135 FBDBKF_11135 97.1 Morganella morganii S1 tpl tyrosine phenol-lyase
EHELCC_05090 EHELCC_05090 97.1 Morganella morganii S2 tpl tyrosine phenol-lyase
EHELCC_13705 EHELCC_13705 52.6 Morganella morganii S2 tnaA tryptophanase
NLDBIP_05410 NLDBIP_05410 97.1 Morganella morganii S4 tpl tyrosine phenol-lyase
NLDBIP_14150 NLDBIP_14150 52.6 Morganella morganii S4 tnaA tryptophanase
LHKJJB_02290 LHKJJB_02290 97.1 Morganella morganii S3 tpl tyrosine phenol-lyase
LHKJJB_08700 LHKJJB_08700 52.6 Morganella morganii S3 tnaA tryptophanase
HKOGLL_08250 HKOGLL_08250 52.6 Morganella morganii S5 tnaA tryptophanase
HKOGLL_15670 HKOGLL_15670 97.1 Morganella morganii S5 tpl tyrosine phenol-lyase
F4V73_RS13145 F4V73_RS13145 52.6 Morganella psychrotolerans tnaA tryptophanase

Distribution of the homologs in the orthogroup group_89

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_89

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P31013 0.0 874 89 0 456 1 tpl Tyrosine phenol-lyase Citrobacter freundii
P31012 0.0 874 89 0 456 3 tpl Tyrosine phenol-lyase Citrobacter intermedius
P31011 0.0 853 86 0 456 1 tpl Tyrosine phenol-lyase Enterobacter agglomerans
Q8RHM6 0.0 780 79 0 451 3 tpl Tyrosine phenol-lyase Fusobacterium nucleatum subsp. nucleatum (strain ATCC 25586 / DSM 15643 / BCRC 10681 / CIP 101130 / JCM 8532 / KCTC 2640 / LMG 13131 / VPI 4355)
Q897C2 0.0 780 79 0 453 3 tpl Tyrosine phenol-lyase Clostridium tetani (strain Massachusetts / E88)
Q9CMK9 0.0 726 74 0 452 3 tpl Tyrosine phenol-lyase Pasteurella multocida (strain Pm70)
D9R201 0.0 675 68 1 455 3 tpl Tyrosine phenol-lyase Lacrimispora saccharolytica (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1)
Q08897 0.0 633 63 0 452 1 tpl Tyrosine phenol-lyase Symbiobacterium thermophilum (strain DSM 24528 / JCM 14929 / IAM 14863 / T)
O08501 0.0 633 63 0 452 3 tpl Tyrosine phenol-lyase Symbiobacterium sp. (strain SC-1)
E6SFG5 0.0 611 62 1 450 3 tpl Tyrosine phenol-lyase Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / NCIMB 10167 / NRRL B-3866 / 7 KIP)
B2J908 0.0 599 61 0 450 3 tpl Tyrosine phenol-lyase Nostoc punctiforme (strain ATCC 29133 / PCC 73102)
Q8R9K5 0.0 535 56 1 453 3 tnaA Tryptophanase Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4)
P31014 9.18e-167 480 51 3 458 1 tnaA1 Tryptophanase 1 Symbiobacterium thermophilum (strain DSM 24528 / JCM 14929 / IAM 14863 / T)
A1JJH3 2.47e-165 477 51 2 457 3 tnaA Tryptophanase Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)
A1VC86 1.63e-164 474 51 3 455 3 tnaA Tryptophanase Nitratidesulfovibrio vulgaris (strain DP4)
Q729Z3 1.63e-164 474 51 3 455 3 tnaA Tryptophanase Nitratidesulfovibrio vulgaris (strain ATCC 29579 / DSM 644 / CCUG 34227 / NCIMB 8303 / VKM B-1760 / Hildenborough)
P31015 1.12e-163 472 50 3 460 1 tnaA2 Tryptophanase 2 Symbiobacterium thermophilum (strain DSM 24528 / JCM 14929 / IAM 14863 / T)
Q59342 3.53e-162 468 51 3 456 3 tnaA Tryptophanase Klebsiella aerogenes
A8AKE2 8.62e-162 468 50 3 458 3 tnaA Tryptophanase Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696)
Q7N8C9 2.77e-160 464 51 3 457 3 tnaA Tryptophanase Photorhabdus laumondii subsp. laumondii (strain DSM 15139 / CIP 105565 / TT01)
Q87JQ6 4.15e-157 456 50 2 457 3 tnaA Tryptophanase Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
A8G097 4.18e-156 453 50 2 458 3 tnaA Tryptophanase Shewanella sediminis (strain HAW-EB3)
A0KJP3 8.53e-156 452 50 2 456 3 tnaA Tryptophanase Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / DSM 30187 / BCRC 13018 / CCUG 14551 / JCM 1027 / KCTC 2358 / NCIMB 9240 / NCTC 8049)
Q894M8 1.66e-155 452 48 1 453 3 tnaA Tryptophanase Clostridium tetani (strain Massachusetts / E88)
P28796 1.21e-154 449 49 2 457 1 tnaA Tryptophanase Proteus vulgaris
Q7NYV9 1.19e-153 447 50 3 453 3 tnaA Tryptophanase Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / CCUG 213 / NBRC 12614 / NCIMB 9131 / NCTC 9757 / MK)
A2EYC4 1.26e-153 447 48 2 451 3 TVAG_054490 Probable beta-eliminating lyase Trichomonas vaginalis (strain ATCC PRA-98 / G3)
A4SNA7 1.82e-152 444 50 2 456 3 tnaA Tryptophanase Aeromonas salmonicida (strain A449)
Q2S1V4 1.26e-149 437 47 2 448 3 tnaA Tryptophanase Salinibacter ruber (strain DSM 13855 / M31)
Q0C406 3.7e-142 417 46 2 449 3 tnaA Tryptophanase Hyphomonas neptunium (strain ATCC 15444)
Q9ZNA8 1e-140 414 47 3 457 3 tnaA Tryptophanase Proteus inconstans
Q9CL27 4.28e-139 410 44 3 464 3 tnaA Tryptophanase Pasteurella multocida (strain Pm70)
B0UTZ3 8.23e-138 407 44 3 461 3 tnaA Tryptophanase Histophilus somni (strain 2336)
Q0I3R5 2.19e-137 405 44 3 461 3 tnaA Tryptophanase Histophilus somni (strain 129Pt)
O30971 2.23e-137 405 46 2 449 3 tnaA Tryptophanase Rhodobacter capsulatus
Q4QML4 1.18e-134 399 43 3 464 3 tnaA Tryptophanase Haemophilus influenzae (strain 86-028NP)
C3LUI5 1.45e-134 399 43 3 461 3 tnaA Tryptophanase Vibrio cholerae serotype O1 (strain M66-2)
Q9KN05 1.45e-134 399 43 3 461 3 tnaA Tryptophanase Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
B5YXB2 1.78e-134 398 43 3 464 3 tnaA Tryptophanase Escherichia coli O157:H7 (strain EC4115 / EHEC)
Q8XB34 1.78e-134 398 43 3 464 3 tnaA Tryptophanase Escherichia coli O157:H7
P0A854 2.37e-134 398 43 3 464 3 tnaA Tryptophanase Shigella flexneri
Q0SYP7 2.37e-134 398 43 3 464 3 tnaA Tryptophanase Shigella flexneri serotype 5b (strain 8401)
B6I3U1 2.37e-134 398 43 3 464 3 tnaA Tryptophanase Escherichia coli (strain SE11)
B7NF25 2.37e-134 398 43 3 464 3 tnaA Tryptophanase Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC)
P0A853 2.37e-134 398 43 3 464 1 tnaA Tryptophanase Escherichia coli (strain K12)
B1IX30 2.37e-134 398 43 3 464 3 tnaA Tryptophanase Escherichia coli (strain ATCC 8739 / DSM 1576 / NBRC 3972 / NCIMB 8545 / WDCM 00012 / Crooks)
Q0TB00 2.37e-134 398 43 3 464 3 tnaA Tryptophanase Escherichia coli O6:K15:H31 (strain 536 / UPEC)
B1X9T7 2.37e-134 398 43 3 464 3 tnaA Tryptophanase Escherichia coli (strain K12 / DH10B)
C4ZYY6 2.37e-134 398 43 3 464 3 tnaA Tryptophanase Escherichia coli (strain K12 / MC4100 / BW2952)
B7M560 2.37e-134 398 43 3 464 3 tnaA Tryptophanase Escherichia coli O8 (strain IAI1)
B7N212 2.37e-134 398 43 3 464 3 tnaA Tryptophanase Escherichia coli O81 (strain ED1a)
B7NR10 2.37e-134 398 43 3 464 3 tnaA Tryptophanase Escherichia coli O7:K1 (strain IAI39 / ExPEC)
B7L853 2.37e-134 398 43 3 464 3 tnaA Tryptophanase Escherichia coli (strain 55989 / EAEC)
B7MGC9 2.37e-134 398 43 3 464 3 tnaA Tryptophanase Escherichia coli O45:K1 (strain S88 / ExPEC)
B7UMH5 2.37e-134 398 43 3 464 3 tnaA Tryptophanase Escherichia coli O127:H6 (strain E2348/69 / EPEC)
A7ZTR3 2.37e-134 398 43 3 464 3 tnaA Tryptophanase Escherichia coli O139:H28 (strain E24377A / ETEC)
Q8FBV2 3.98e-134 397 43 3 464 3 tnaA Tryptophanase Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
A5EYI0 5.83e-134 397 43 3 461 3 tnaA Tryptophanase Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395)
B7LK50 1.01e-133 396 43 3 464 3 tnaA Tryptophanase Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CCUG 18766 / IAM 14443 / JCM 21226 / LMG 7866 / NBRC 102419 / NCTC 12128 / CDC 0568-73)
B1LL35 1.15e-133 396 43 3 464 3 tnaA Tryptophanase Escherichia coli (strain SMS-3-5 / SECEC)
B2TUR7 1.26e-133 396 43 3 464 3 tnaA Tryptophanase Shigella boydii serotype 18 (strain CDC 3083-94 / BS512)
A8A6H0 2.75e-133 395 43 3 464 3 tnaA Tryptophanase Escherichia coli O9:H4 (strain HS)
Q7MCR1 4.74e-133 395 42 3 461 3 tnaA Tryptophanase Vibrio vulnificus (strain YJ016)
Q8D5Q4 4.74e-133 395 42 3 461 3 tnaA Tryptophanase Vibrio vulnificus (strain CMCP6)
O07674 4.49e-132 392 42 3 464 3 tnaA Tryptophanase Haemophilus influenzae
Q9HMV2 1.77e-123 369 43 5 451 3 tnaA Probable tryptophanase Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1)
B0R7Q6 1.77e-123 369 43 5 451 3 tnaA Probable tryptophanase Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1)
Q9YCI2 3.42e-118 357 43 6 458 3 tnaA Probable tryptophanase Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1)
Q54UE3 1.11e-44 157 46 0 164 5 DDB_G0281127 Putative beta-eliminating lyase-like protein Dictyostelium discoideum
Q21890 3.54e-05 49 28 6 184 3 R102.4 Uncharacterized protein R102.4 Caenorhabditis elegans

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS08140
Feature type CDS
Gene -
Product tyrosine phenol-lyase
Location 1690832 - 1692202 (strand: 1)
Length 1371 (nucleotides) / 456 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_89
Orthogroup size 12
N. genomes 6

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Genomic region

Domains

PF01212 Beta-eliminating lyase

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3033 Amino acid transport and metabolism (E) E Tryptophanase

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K01668 tyrosine phenol-lyase [EC:4.1.99.2] Tyrosine metabolism -

Protein Sequence

MMYPAEPYRIKSVETVSMIPREERINRMKEAGYNTFLLNSKDVYVDLLTDSGTNAMSDKQWAGMMMGDEAYAGSENFFHLERTVQELFGFKHIIPTHQGRGAENLLSSLAIKPGQYVAGNMYFTTTRYHQEKNGATFVDIVRDEAHDAGLDVKFKGNIDLKKLEKLIAEKGAENIAYICLAVTVNLAGGQPVSMANMREVRQLCNKHKINVFYDATRCVENAYFIKEQEAGFEDVSIKDIIHEMFSYADGCTMSGKKDCLVNIGGFLCMNDDDLFSAARELVVVYEGMPSYGGLAGRDMEAMAIGLREAMQFEYIEHRVKQVRYLGDKLKAAGVPIVEPVGGHAVFLDARRFCAHLTQDEFPAQSLAASIYMETGVRSMERGIISAGRNKETGDHHRPKLETVRLTIPRRVYTYAHMDLVADGIIKLFKHKEDIKGLKFIYEPKQLRFFTARFDYV

Flanking regions ( +/- flanking 50bp)

TGCCTGTGTAAACTATCGAGTTATTATTATAAATAATTGGAGATTTTACCATGATGTATCCAGCAGAACCGTATCGTATTAAAAGTGTTGAAACTGTTTCCATGATCCCTCGCGAAGAGCGTATCAACAGAATGAAAGAGGCCGGTTACAACACATTCTTGTTAAATTCCAAAGATGTCTATGTCGATTTACTGACAGACAGCGGCACCAACGCCATGTCCGATAAGCAATGGGCGGGCATGATGATGGGTGACGAAGCTTACGCGGGCAGTGAGAACTTCTTCCACCTGGAAAGAACCGTTCAGGAATTATTTGGCTTTAAACACATTATTCCTACACACCAGGGCCGCGGCGCAGAGAATTTACTCTCTTCTTTAGCCATTAAACCGGGTCAGTATGTTGCCGGGAATATGTATTTCACAACCACCCGTTACCATCAGGAAAAAAACGGTGCCACATTCGTTGATATCGTGCGTGATGAAGCACACGATGCCGGTCTGGATGTGAAATTTAAAGGCAACATTGACCTTAAAAAGCTGGAAAAACTGATTGCAGAAAAAGGCGCGGAAAATATTGCGTATATCTGCCTGGCAGTAACAGTAAACCTGGCAGGTGGTCAGCCGGTTTCCATGGCAAACATGCGTGAAGTCCGTCAATTATGTAATAAACACAAAATCAACGTGTTCTATGATGCAACCCGTTGTGTTGAAAATGCCTACTTTATCAAAGAGCAGGAAGCCGGTTTTGAAGATGTCTCCATCAAAGACATCATCCATGAAATGTTCAGCTACGCTGACGGTTGTACCATGAGTGGTAAAAAAGACTGTCTGGTGAACATTGGTGGTTTCCTGTGTATGAACGACGACGACCTGTTCTCAGCAGCACGCGAACTGGTTGTGGTTTATGAAGGAATGCCTTCTTACGGCGGCCTGGCCGGTCGTGATATGGAAGCAATGGCGATTGGTTTACGCGAAGCAATGCAGTTTGAATATATCGAGCACCGCGTTAAGCAGGTTCGTTATCTGGGTGACAAACTGAAAGCTGCCGGTGTGCCGATTGTTGAACCTGTCGGTGGTCACGCAGTATTCCTGGATGCACGTCGTTTCTGCGCTCACCTGACCCAGGATGAATTCCCGGCGCAGAGTCTGGCAGCCAGCATCTATATGGAAACCGGTGTCCGTTCAATGGAGCGCGGTATTATTTCCGCAGGCCGTAATAAAGAAACCGGCGACCATCACCGTCCTAAGCTTGAGACTGTTCGTCTGACTATTCCACGTCGTGTTTACACTTACGCGCACATGGACCTGGTTGCTGACGGTATTATCAAGCTGTTCAAACATAAAGAAGATATTAAAGGGCTGAAGTTCATTTATGAGCCTAAGCAGCTGCGCTTCTTTACTGCACGCTTTGATTACGTGTAACCAATTGATGACAACGGCCTCATTACTTTAATGGGGCTTTTTTGTCTCTG