Homologs in group_1673

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_11630 FBDBKF_11630 94.3 Morganella morganii S1 marR DNA-binding transcriptional regulator, MarR family
EHELCC_17550 EHELCC_17550 94.3 Morganella morganii S2 marR DNA-binding transcriptional regulator, MarR family
NLDBIP_18760 NLDBIP_18760 94.3 Morganella morganii S4 marR DNA-binding transcriptional regulator, MarR family
LHKJJB_17990 LHKJJB_17990 94.3 Morganella morganii S3 marR DNA-binding transcriptional regulator, MarR family
HKOGLL_18660 HKOGLL_18660 94.3 Morganella morganii S5 marR DNA-binding transcriptional regulator, MarR family
PMI_RS08980 PMI_RS08980 60.0 Proteus mirabilis HI4320 - MarR family transcriptional regulator

Distribution of the homologs in the orthogroup group_1673

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1673

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P62088 2.6e-07 50 29 0 91 4 prsX HTH-type transcriptional regulator PrsX Escherichia coli
P62089 2.6e-07 50 29 0 91 4 prsX HTH-type transcriptional regulator PrsX Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P42193 5.94e-07 49 25 1 113 4 papX HTH-type transcriptional regulator PapX Escherichia coli
O31592 2.49e-05 44 27 0 107 4 yhbI Uncharacterized HTH-type transcriptional regulator YhbI Bacillus subtilis (strain 168)
P0ACR9 3.15e-05 45 29 0 91 2 mprA Transcriptional repressor MprA Escherichia coli (strain K12)
P0ACS0 3.15e-05 45 29 0 91 3 mprA Transcriptional repressor MprA Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0ACS1 3.15e-05 45 29 0 91 3 mprA Transcriptional repressor MprA Escherichia coli O157:H7
O31564 5.4e-05 43 34 1 87 4 yfiV Uncharacterized HTH-type transcriptional regulator YfiV Bacillus subtilis (strain 168)
P0A2T4 0.000494 41 25 2 111 4 marR Multiple antibiotic resistance protein MarR Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A2T5 0.000494 41 25 2 111 3 marR Multiple antibiotic resistance protein MarR Salmonella typhi

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS08050
Feature type CDS
Gene -
Product MarR family transcriptional regulator
Location 1671352 - 1671774 (strand: 1)
Length 423 (nucleotides) / 140 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1673
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF12802 MarR family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1846 Transcription (K) K DNA-binding transcriptional regulator, MarR family

Protein Sequence

MSFKELENTLSLLQCTLVAQRTIYSPEKVTWAQYDVMEMLRLQGDLTPSDLSQKLGISRQNVSKSLRALKKHLFVSQYQSEMDKRELVTQLTPEGEEFLSHAAIGRTRNAEKVFASLDEDEQRQFRILSQKVIDALTRDQ

Flanking regions ( +/- flanking 50bp)

CTATTTTTGCCTTTCAGCTACACTAAAGGCGACAATAAAAGGGAGGAGTTATGTCATTCAAGGAATTGGAAAATACACTGTCATTGTTACAGTGTACATTAGTAGCACAACGTACTATTTACTCACCGGAAAAGGTGACATGGGCACAGTATGATGTGATGGAAATGTTGCGCCTTCAGGGTGACCTGACGCCGTCAGATCTGAGTCAGAAATTGGGAATTTCACGCCAGAATGTCTCTAAATCACTGCGGGCACTGAAAAAGCATCTGTTTGTTTCTCAGTATCAGTCTGAAATGGATAAACGCGAGCTGGTTACCCAACTGACACCGGAAGGTGAGGAATTTCTTTCACATGCGGCGATCGGACGAACCCGTAATGCGGAAAAGGTATTTGCAAGTCTTGATGAAGATGAGCAGCGTCAGTTTCGTATATTGAGCCAGAAGGTTATCGATGCACTGACCCGTGATCAGTGAGACGGTCGTTTGAGCGGTTTTATCAGACCACTTAAACCTTCAATTTTAAT