Homologs in group_226

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7 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_00815 FBDBKF_00815 93.8 Morganella morganii S1 flhC flagellar transcriptional regulator FlhC
EHELCC_00730 EHELCC_00730 93.8 Morganella morganii S2 flhC flagellar transcriptional regulator FlhC
NLDBIP_02730 NLDBIP_02730 93.8 Morganella morganii S4 flhC flagellar transcriptional regulator FlhC
LHKJJB_04245 LHKJJB_04245 93.8 Morganella morganii S3 flhC flagellar transcriptional regulator FlhC
HKOGLL_02800 HKOGLL_02800 93.8 Morganella morganii S5 flhC flagellar transcriptional regulator FlhC
PMI_RS08160 PMI_RS08160 76.2 Proteus mirabilis HI4320 flhC flagellar transcriptional regulator FlhC
PMI_RS12015 PMI_RS12015 26.3 Proteus mirabilis HI4320 - FlhC family transcriptional regulator

Distribution of the homologs in the orthogroup group_226

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_226

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
O34202 1.51e-110 316 75 0 193 1 flhC Flagellar transcriptional regulator FlhC Proteus mirabilis
Q9X9F3 4.39e-108 310 76 1 194 3 flhC Flagellar transcriptional regulator FlhC Xenorhabdus nematophila
O86047 2.45e-107 308 80 0 181 3 flhC Flagellar transcriptional regulator FlhC Yersinia enterocolitica
O85807 8.01e-106 304 78 0 180 3 flhC Flagellar transcriptional regulator FlhC Serratia marcescens
P0ABZ0 5.3e-102 295 77 1 180 3 flhC Flagellar transcriptional regulator FlhC Shigella flexneri
P0ABY7 5.3e-102 295 77 1 180 1 flhC Flagellar transcriptional regulator FlhC Escherichia coli (strain K12)
P0ABY8 5.3e-102 295 77 1 180 3 flhC Flagellar transcriptional regulator FlhC Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0ABY9 5.3e-102 295 77 1 180 3 flhC Flagellar transcriptional regulator FlhC Escherichia coli O157:H7
O52222 4.3e-100 290 76 1 180 2 flhC Flagellar transcriptional regulator FlhC Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q9X601 1.73e-98 286 75 2 181 3 flhC Flagellar transcriptional regulator FlhC Pectobacterium carotovorum
D5W6H7 1.1e-76 231 61 1 172 3 flhC Flagellar transcriptional regulator FlhC Paraburkholderia atlantica
Q2NX28 2.06e-74 225 58 0 183 3 flhC Flagellar transcriptional regulator FlhC Sodalis glossinidius (strain morsitans)
B2VDW1 2.7e-70 214 57 0 170 3 flhC Flagellar transcriptional regulator FlhC Erwinia tasmaniensis (strain DSM 17950 / CFBP 7177 / CIP 109463 / NCPPB 4357 / Et1/99)
D5CIL6 5.67e-70 214 58 0 173 3 flhC Flagellar transcriptional regulator FlhC Enterobacter cloacae subsp. cloacae (strain ATCC 13047 / DSM 30054 / NBRC 13535 / NCTC 10005 / WDCM 00083 / NCDC 279-56)
C4KBU2 1.22e-65 202 52 1 172 3 flhC Flagellar transcriptional regulator FlhC Thauera aminoaromatica
C5CXR6 9.62e-65 201 54 1 171 3 flhC Flagellar transcriptional regulator FlhC Variovorax paradoxus (strain S110)
D9SEU0 6.12e-63 195 48 1 180 3 flhC Flagellar transcriptional regulator FlhC Gallionella capsiferriformans (strain ES-2)
B2JU32 1.05e-62 196 53 1 166 3 flhC Flagellar transcriptional regulator FlhC Paraburkholderia phymatum (strain DSM 17167 / CIP 108236 / LMG 21445 / STM815)
Q1LMQ4 1.02e-61 193 53 2 176 3 flhC Flagellar transcriptional regulator FlhC Cupriavidus metallidurans (strain ATCC 43123 / DSM 2839 / NBRC 102507 / CH34)
Q0K2R3 3.91e-58 184 51 2 170 3 flhC Flagellar transcriptional regulator FlhC Cupriavidus necator (strain ATCC 17699 / DSM 428 / KCTC 22496 / NCIMB 10442 / H16 / Stanier 337)
A1WJ05 1.84e-55 176 50 2 168 3 flhC Flagellar transcriptional regulator FlhC Verminephrobacter eiseniae (strain EF01-2)
Q0AI30 4.11e-54 173 45 1 172 3 flhC Flagellar transcriptional regulator FlhC Nitrosomonas eutropha (strain DSM 101675 / C91 / Nm57)
Q46TH1 1.98e-50 164 47 1 159 3 flhC Flagellar transcriptional regulator FlhC Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197)
Q39LF8 6.53e-49 161 47 1 175 3 flhC Flagellar transcriptional regulator FlhC Burkholderia lata (strain ATCC 17760 / DSM 23089 / LMG 22485 / NCIMB 9086 / R18194 / 383)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS06810
Feature type CDS
Gene flhC
Product flagellar transcriptional regulator FlhC
Location 1414485 - 1415066 (strand: -1)
Length 582 (nucleotides) / 193 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_226
Orthogroup size 8
N. genomes 7

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Genomic region

Domains

PF05280 Flagellar transcriptional activator (FlhC)

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K02402 flagellar transcriptional activator FlhC Two-component system
Quorum sensing
Biofilm formation - Escherichia coli
Flagellar assembly		 -

Virulence factor Annotation(s)

VF gene ID Protein VF ID Category
VFG002358 flagellar biosynthesis transcription activator FlhC VF0394 Motility

Protein Sequence

MAEKSIIKEAQDIRLAMELITLGARLQMLESETQISRGRLIRLYKELRGCPPPKGMLPFSTDWFMTWEQNIHASMFYNAYQFLMNSDQCTGVDVIVKAYRLYLEQCPPAPGEDPLLALTRAWTLVRFVDSGMLQCSVCFGCKGSFITYAHIPENSFTCSLCQPPSRAIKKRKLSAHPADITLYRQDGIAKAVM

Flanking regions ( +/- flanking 50bp)

ACACATGGCGCGGGTGACTCTGACTCACATGCAAGAAAAAGATAAGTATCATGGCTGAAAAAAGTATCATCAAAGAGGCTCAGGATATCCGTCTCGCGATGGAATTAATCACTCTGGGTGCCCGTCTTCAGATGTTGGAAAGTGAAACACAAATCAGCCGGGGACGACTGATTCGGTTATACAAAGAGCTGCGGGGTTGCCCGCCGCCGAAAGGCATGCTGCCGTTTTCGACAGACTGGTTTATGACCTGGGAACAAAATATTCATGCTTCCATGTTTTATAACGCTTACCAGTTTTTAATGAACAGCGACCAGTGCACCGGAGTTGACGTGATAGTAAAGGCTTACCGGCTTTACCTGGAGCAGTGCCCGCCAGCGCCCGGTGAGGACCCTTTGCTGGCGCTGACCCGTGCATGGACTCTGGTCCGGTTTGTGGACAGCGGTATGTTGCAATGCTCTGTCTGCTTCGGGTGCAAAGGCTCATTTATCACCTATGCACACATCCCTGAAAACAGTTTTACCTGTAGTCTGTGTCAGCCTCCGTCACGGGCAATAAAAAAACGTAAACTTTCCGCTCATCCCGCCGATATTACGCTATATCGACAGGATGGCATTGCCAAAGCGGTAATGTGATTGGATTGATTTGGTAAACAGGCAAATATAGTTTGCCTGTCCTTCCTGAA