VFG002358
Help to interpret the results
Three outputs have been generated:
General: this tab contains the description, occurence in the database and other information related to the selected Virulence factor VFG002358
Protein list: lists the 6 occurences of the Virulence factor within the database. The table reports information on each occurence.
Profile: phylogenetic tree annotated with
- the presence of the Virulence factor of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Virulence factor has been clustered.
Orthogroups are shown in red if they are annotated with that particular Virulence factor in a given genome , in green otherwise, i.e. if there is a discrepency between orthogroup clustering and Virulence factor prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered Virulence factor.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Virulence factor prediction.
Description
Protein |
flagellar biosynthesis transcription activator FlhC |
VF ID |
VF0394 |
Category |
Motility |
Protein ID |
WP_005164496 |
Function |
Required for efficient cellular invasion; YplA, a phospholipase is secreted by this type III flagellum secretion system. YplA is required for survival of Y. enterocolitica in the Peyer's patches and for stimulation of the acute inflammatory response of the host to the infection; contributed to the initiation of biofilm formation |
Vf_category_id |
VFC0204 |
Occurence in the database
VFG002358 is associated with 6 different
proteins
|
The 6 proteins are classified into 1 different orthogroup(s)
|
|
Orthogroup |
Locus |
Start |
Stop |
S. |
Gene |
Product |
Organism |
0 |
group_564 |
FBDBKF_00815 |
149557 |
150138 |
-1 |
flhC |
flagellar transcriptional regulator FlhC |
Morganella morganii S1 |
1 |
group_564 |
EHELCC_00730 |
158730 |
159311 |
1 |
flhC |
flagellar transcriptional regulator FlhC |
Morganella morganii S2 |
2 |
group_564 |
NLDBIP_02730 |
520825 |
521406 |
-1 |
flhC |
flagellar transcriptional regulator FlhC |
Morganella morganii S4 |
3 |
group_564 |
LHKJJB_04245 |
128066 |
128647 |
-1 |
flhC |
flagellar transcriptional regulator FlhC |
Morganella morganii S3 |
4 |
group_564 |
HKOGLL_02800 |
158935 |
159516 |
1 |
flhC |
flagellar transcriptional regulator FlhC |
Morganella morganii S5 |
5 |
group_564 |
F4V73_RS06810 |
1414485 |
1415066 |
-1 |
flhC |
flagellar transcriptional regulator FlhC |
Morganella psychrotolerans |