COG4787


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG4787, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Flagellar basal body rod protein FlgF
Function(s) descr. Cell motility (N)

Occurence in the database

COG4787 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_469 FBDBKF_00695 116660 117415 -1 flgF Flagellar basal body rod protein FlgF Morganella morganii S1
1 group_469 EHELCC_00850 191453 192208 1 flgF Flagellar basal body rod protein FlgF Morganella morganii S2
2 group_469 NLDBIP_02610 487928 488683 -1 flgF Flagellar basal body rod protein FlgF Morganella morganii S4
3 group_469 LHKJJB_04125 95169 95924 -1 flgF Flagellar basal body rod protein FlgF Morganella morganii S3
4 group_469 HKOGLL_02920 191658 192413 1 flgF Flagellar basal body rod protein FlgF Morganella morganii S5
5 group_469 F4V73_RS06705 1393488 1394243 -1 flagellar basal body rod protein FlgF Morganella psychrotolerans
6 group_469 PMI_RS08055 1761097 1761852 -1 flagellar basal body rod protein FlgF Proteus mirabilis HI4320