Homologs in group_458

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_00630 FBDBKF_00630 91.9 Morganella morganii S1 fliN Flagellar motor switch/type III secretory pathway protein FliN
EHELCC_00915 EHELCC_00915 91.9 Morganella morganii S2 fliN Flagellar motor switch/type III secretory pathway protein FliN
NLDBIP_02545 NLDBIP_02545 91.9 Morganella morganii S4 fliN Flagellar motor switch/type III secretory pathway protein FliN
LHKJJB_04060 LHKJJB_04060 91.9 Morganella morganii S3 fliN Flagellar motor switch/type III secretory pathway protein FliN
HKOGLL_02985 HKOGLL_02985 91.9 Morganella morganii S5 fliN Flagellar motor switch/type III secretory pathway protein FliN
PMI_RS08000 PMI_RS08000 75.4 Proteus mirabilis HI4320 fliN flagellar motor switch protein FliN

Distribution of the homologs in the orthogroup group_458

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_458

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P26419 2.97e-55 172 65 2 138 1 fliN Flagellar motor switch protein FliN Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P15070 4.26e-55 172 65 2 138 1 fliN Flagellar motor switch protein FliN Escherichia coli (strain K12)
P35539 1.1e-54 169 80 0 103 3 fliN Flagellar motor switch protein FliN (Fragment) Pectobacterium carotovorum subsp. carotovorum
Q51466 8.96e-31 110 59 0 83 3 fliN Flagellar motor switch protein FliN Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q89AZ3 4.83e-26 98 46 2 115 3 fliN Flagellar motor switch protein FliN Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp)
P24073 1.08e-25 102 46 1 102 3 fliY Flagellar motor switch phosphatase FliY Bacillus subtilis (strain 168)
Q44903 5.08e-25 94 54 0 75 3 fliN Flagellar motor switch protein FliN Borreliella burgdorferi (strain ATCC 35210 / DSM 4680 / CIP 102532 / B31)
P57183 7.81e-19 79 37 1 109 3 fliN Flagellar motor switch protein FliN Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
Q03593 4.19e-16 72 42 0 80 3 fliN Flagellar motor switch protein FliN Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15)
Q57259 2.08e-13 66 37 3 88 3 fliN Flagellar motor switch protein FliN Agrobacterium fabrum (strain C58 / ATCC 33970)
Q8KA38 1.61e-12 63 42 0 70 3 fliN Flagellar motor switch protein FliN Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
O54245 1.64e-12 64 35 1 77 3 fliN Flagellar motor switch protein FliN Rhizobium meliloti (strain 1021)
O67495 8.55e-10 55 38 0 68 3 fliN Flagellar motor switch protein FliN Aquifex aeolicus (strain VF5)
P74860 0.000657 41 30 0 65 3 ssaQ Secretion system apparatus protein SsaQ Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P40296 0.00068 41 33 2 80 1 yscQ Yop proteins translocation protein Q Yersinia pseudotuberculosis serotype I (strain IP32953)
P42713 0.00068 41 33 2 80 3 yscQ Yop proteins translocation protein Q Yersinia pestis

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS06640
Feature type CDS
Gene fliN
Product flagellar motor switch protein FliN
Location 1382330 - 1382740 (strand: 1)
Length 411 (nucleotides) / 136 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_458
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF01052 Type III flagellar switch regulator (C-ring) FliN C-term

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1886 Cell motility (N)
Intracellular trafficking, secretion, and vesicular transport (U)		 NU Flagellar motor switch/type III secretory pathway protein FliN

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K02417 flagellar motor switch protein FliN Bacterial chemotaxis
Flagellar assembly		 -

Virulence factor Annotation(s)

VF gene ID Protein VF ID Category
VFG003423 flagellar motor switch protein FliN VF0394 Motility

Protein Sequence

MSEANNTPGMNPEKNDESLWADAMEQQKKAESGTQNPFDNLDSQNPLSQLSDINLIMDIPVRLSVELGRTKMTIKKLLSLSQGSVVALDGLAGEPLDILINGYLIAQGEVVVVSDNYGIRITDIITPSERMRRLSR

Flanking regions ( +/- flanking 50bp)

AGAACATTTGATTAACCCTGTATTAAACACTCTGGACGAGGAAAAAACCAATGAGTGAGGCGAATAACACTCCGGGCATGAACCCTGAAAAAAATGATGAATCTCTGTGGGCTGATGCGATGGAACAACAAAAAAAAGCAGAATCCGGGACTCAGAACCCGTTTGATAACCTTGACAGCCAGAATCCGCTGAGTCAGCTATCCGATATCAATCTGATTATGGATATCCCTGTCCGCCTCTCTGTTGAGCTGGGCCGGACAAAAATGACCATCAAAAAACTCCTGAGTTTATCGCAGGGTTCGGTGGTCGCACTTGACGGACTCGCCGGCGAGCCGTTGGATATTCTGATCAACGGCTATCTGATTGCGCAGGGCGAGGTGGTGGTTGTCTCAGATAACTACGGTATCCGCATCACGGATATTATTACCCCGTCTGAGCGTATGCGTCGTCTGAGCCGCTGATATGATAGCAAACAGCGCCGGGCACGCCGCGTTACCGGCAACAGAAAAAA